Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0700
         (820 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.55 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    25   0.96 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.7  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   3.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.55
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
 Frame = +1

Query: 100 CSYVDIRNFLLRTKWLSSACFFLYF----LLLRCVDKLTGHLV 216
           C Y     F++ T  L   C F++F    L L C+D  T HL+
Sbjct: 165 CIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDYFTLHLL 207


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -3

Query: 344 SSNAFRFEGWGSRCNYTETLGLISQGGWRI 255
           + N+ ++ G      Y E + L  +GGW++
Sbjct: 284 AGNSGKYTGEAGMLGYNEIVELQKEGGWKV 313


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = +1

Query: 130 LRTKWLSSACFFLYFLL---LRCVDKLTGH 210
           +R K   S C ++YFLL   L+  D+L+ H
Sbjct: 664 IRAKKRWSQCMYMYFLLGFRLQANDELSAH 693


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = +1

Query: 130 LRTKWLSSACFFLYFLL---LRCVDKLTGH 210
           +R K   S C ++YFLL   L+  D+L+ H
Sbjct: 664 IRAKKRWSQCMYMYFLLGFRLQANDELSAH 693


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = +1

Query: 646 DTENKIFY-SFRL*LLIMICFALFGIIDH 729
           D E   FY SF L +  ++C  LFG   H
Sbjct: 314 DLERLYFYWSFALLITRIVCLCLFGAKVH 342


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,660
Number of Sequences: 336
Number of extensions: 3766
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)