Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0700
         (820 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   1.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   1.9  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    22   5.9  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    22   5.9  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +1

Query: 304 QRLPHPSNRNALL-LHGRNRQGGGTYRCGLTIKYSYESAEKSPSDLQ 441
           ++LP    ++ LL L+G NR+  G Y+C   ++ S     ++ ++LQ
Sbjct: 372 RQLPGTGRQSELLRLNGINREDRGMYQC--IVRRSEGDTAQASAELQ 416



 Score = 23.8 bits (49), Expect = 1.9
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = +1

Query: 322  SNRNALLLHGRNRQGGGTYRCGLTIKYSYESAEKSPSDLQEH 447
            S  +++LLH ++   GG    G T+ Y           L  H
Sbjct: 1415 STSSSILLHWKSGHNGGASLTGYTLHYRTAHGNLDELQLSRH 1456


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +1

Query: 304 QRLPHPSNRNALL-LHGRNRQGGGTYRCGLTIKYSYESAEKSPSDLQ 441
           ++LP    ++ LL L+G NR+  G Y+C   ++ S     ++ ++LQ
Sbjct: 372 RQLPGTGRQSELLRLNGINREDRGMYQC--IVRRSEGDTAQASAELQ 416



 Score = 23.8 bits (49), Expect = 1.9
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = +1

Query: 322  SNRNALLLHGRNRQGGGTYRCGLTIKYSYESAEKSPSDLQEH 447
            S  +++LLH ++   GG    G T+ Y           L  H
Sbjct: 1411 STSSSILLHWKSGHNGGASLTGYTLHYRTAHGNLDELQLSRH 1452


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +2

Query: 431 QIYKNIFSECLKFTKNNGSYCSRFQ*TVECY 523
           Q+ K I +EC++  K     C+      +CY
Sbjct: 106 QLVKGIANECIENAKGETDECNIGNKYTDCY 136


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +2

Query: 431 QIYKNIFSECLKFTKNNGSYCSRFQ*TVECY 523
           Q+ K I +EC++  K     C+      +CY
Sbjct: 106 QLVKGIANECIENAKGETDECNIGNKYTDCY 136


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,197
Number of Sequences: 438
Number of extensions: 4027
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26096055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)