Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0699
(613 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70753-5|CAB54240.1| 910|Caenorhabditis elegans Hypothetical pr... 31 0.65
Z70753-4|CAA94764.1| 924|Caenorhabditis elegans Hypothetical pr... 31 0.65
U00052-2|AAK95881.1| 404|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z75550-6|CAA99930.1| 591|Caenorhabditis elegans Hypothetical pr... 29 2.0
U53139-13|AAK18939.1| 334|Caenorhabditis elegans Hypothetical p... 29 2.6
AB275892-1|BAF34315.1| 334|Caenorhabditis elegans D-aspartate o... 29 2.6
AL032655-4|CAB63413.2| 485|Caenorhabditis elegans Hypothetical ... 28 6.0
AL590342-2|CAC35859.3| 685|Caenorhabditis elegans Hypothetical ... 27 8.0
AL032626-1|CAA21538.1| 183|Caenorhabditis elegans Hypothetical ... 27 8.0
AL032622-4|CAA21499.1| 738|Caenorhabditis elegans Y66A7A.5 prot... 27 8.0
AF067214-6|AAC17005.2| 457|Caenorhabditis elegans Hypothetical ... 27 8.0
>Z70753-5|CAB54240.1| 910|Caenorhabditis elegans Hypothetical
protein F40F9.6b protein.
Length = 910
Score = 31.1 bits (67), Expect = 0.65
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 309 LQSHTLRVKVPEEITKSAASEYVPRSLLTDLPSELDMPL--DGEDEAEVVEG 458
L T+RV++ +E + YVP L LP EL+ +G+ EA+++ G
Sbjct: 81 LADSTVRVQI-DEPESAIRKRYVPNPALVSLPEELEFSSVENGDQEAKIIGG 131
>Z70753-4|CAA94764.1| 924|Caenorhabditis elegans Hypothetical
protein F40F9.6a protein.
Length = 924
Score = 31.1 bits (67), Expect = 0.65
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 309 LQSHTLRVKVPEEITKSAASEYVPRSLLTDLPSELDMPL--DGEDEAEVVEG 458
L T+RV++ +E + YVP L LP EL+ +G+ EA+++ G
Sbjct: 95 LADSTVRVQI-DEPESAIRKRYVPNPALVSLPEELEFSSVENGDQEAKIIGG 145
>U00052-2|AAK95881.1| 404|Caenorhabditis elegans Hypothetical
protein K02F3.6 protein.
Length = 404
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/87 (24%), Positives = 39/87 (44%)
Frame = +3
Query: 60 ASATYPASKLVKNIYNECLSQYSVECVKPRTLQWMSSVANDDEIKITEDLSIVKTGTVED 239
AS YP + +NI+N Q + P + W ++ D + L+ +K GT++
Sbjct: 318 ASFKYPIN-YYRNIFNAKKQQADLVLEMPTLIIWGTADGALDIEAAVDSLNTLKQGTMKK 376
Query: 240 DESADPRLAKDPAYEMFDKVDKFLQSH 320
E A + +D + + + KFL +
Sbjct: 377 IEGASHWVQQDEPEMVNEHIKKFLNKY 403
>Z75550-6|CAA99930.1| 591|Caenorhabditis elegans Hypothetical
protein T22C1.8 protein.
Length = 591
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 225 GTVEDDESADPRLAKDPAYEMFDKVDK 305
G +DD+ A RLAK P+ E D+ DK
Sbjct: 9 GNSQDDQQASRRLAKKPSDEKVDEKDK 35
>U53139-13|AAK18939.1| 334|Caenorhabditis elegans Hypothetical
protein F18E3.7a protein.
Length = 334
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -3
Query: 326 KSMTLEKLVHFVEHFVGRILGQSRVGRFIILNCSGLHDRKIFSD 195
K++ LE+ + F + V + + G +I+NC+GL+ K+ D
Sbjct: 151 KNLLLEQKIEFKQQEVTSLDAVADAGYDVIVNCAGLYGGKLAGD 194
>AB275892-1|BAF34315.1| 334|Caenorhabditis elegans D-aspartate
oxidase protein.
Length = 334
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -3
Query: 326 KSMTLEKLVHFVEHFVGRILGQSRVGRFIILNCSGLHDRKIFSD 195
K++ LE+ + F + V + + G +I+NC+GL+ K+ D
Sbjct: 151 KNLLLEQKIEFKQQEVTSLDAVADAGYDVIVNCAGLYGGKLAGD 194
>AL032655-4|CAB63413.2| 485|Caenorhabditis elegans Hypothetical
protein Y6B3B.9 protein.
Length = 485
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 518 DETVFALDPQWFRELDLLLPALNDFSLIF 432
D VF+ D +W++ LD LLP +FS F
Sbjct: 331 DADVFS-DEEWYKVLDHLLPVAKNFSTEF 358
>AL590342-2|CAC35859.3| 685|Caenorhabditis elegans Hypothetical
protein Y66A7A.5 protein.
Length = 685
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 219 KTGTVEDDESADPRLAKDPAYEM 287
K+ +EDD+ PRLAK P EM
Sbjct: 647 KSPKLEDDDDPPPRLAKMPRLEM 669
>AL032626-1|CAA21538.1| 183|Caenorhabditis elegans Hypothetical
protein Y37D8A.1 protein.
Length = 183
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -3
Query: 563 SFKFETQQERQDNLLDETVFALDPQ-WFRELDLLLPALNDFSLIFSI 426
+FK Q QD+++DE + P +FRE ++ PA D ++I+ I
Sbjct: 30 NFKGPAPQTNQDDIIDEALTYFKPNIFFREFEIKGPA--DRTMIYLI 74
>AL032622-4|CAA21499.1| 738|Caenorhabditis elegans Y66A7A.5
protein.
Length = 738
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 219 KTGTVEDDESADPRLAKDPAYEM 287
K+ +EDD+ PRLAK P EM
Sbjct: 700 KSPKLEDDDDPPPRLAKMPRLEM 722
>AF067214-6|AAC17005.2| 457|Caenorhabditis elegans Hypothetical
protein F56C3.2 protein.
Length = 457
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 108 ECLSQYSVECVKPRTLQWMSSVANDDEIKITEDLSIVK 221
EC + CVKPRTL+ + N DE + E IV+
Sbjct: 301 ECQMAEMLSCVKPRTLEKIVLQKNYDENQTIELKEIVQ 338
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,163,447
Number of Sequences: 27780
Number of extensions: 263812
Number of successful extensions: 847
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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