Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0699
         (613 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    26   0.33 
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    25   0.77 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   5.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   5.4  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   7.2  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   9.5  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   9.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   9.5  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   9.5  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   9.5  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 580 KGTRTEALNLRPSRKGRITFLMK 512
           +  R  ALN++P+ KGRIT   K
Sbjct: 445 QAVRMSALNVQPTSKGRITLNSK 467


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +3

Query: 231 VEDDESADPRLAKDPAYEMFD--KVDKFLQSHTLRV 332
           +++DES  P+L   P +EM D  K+D  +    +RV
Sbjct: 82  LKNDESESPKLNPYPNWEMNDINKIDSIINIIRVRV 117


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 172 TDDIHCRVLGFTHSTEYWLR 113
           T  +HC V G T  T  WL+
Sbjct: 824 TATLHCEVHGDTPVTVTWLK 843


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 172 TDDIHCRVLGFTHSTEYWLR 113
           T  +HC V G T  T  WL+
Sbjct: 820 TATLHCEVHGDTPVTVTWLK 839


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 274 RPTKCSTKWTSFSR 315
           +PTK  ++W S+SR
Sbjct: 537 KPTKEDSEWPSYSR 550


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = -3

Query: 326 KSMTLEKLVHFVEHF 282
           +S+T++KL+ + +HF
Sbjct: 451 ESVTVDKLITYFDHF 465


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 240 DESADPRLAKDPAYEMFDKVDK 305
           D+S +  L+  P+++ FDK  K
Sbjct: 41  DDSDEEELSARPSFKTFDKGPK 62


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = -3

Query: 326 KSMTLEKLVHFVEHF 282
           +S+T++KL+ + +HF
Sbjct: 451 ESVTVDKLITYFDHF 465


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = -3

Query: 326 KSMTLEKLVHFVEHF 282
           +S+T++KL+ + +HF
Sbjct: 77  ESVTVDKLITYFDHF 91


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 205 SSVILISSSLATDDIHCRVLGF 140
           +SVI  ++S  +DD++   LGF
Sbjct: 407 TSVIQAATSSVSDDLYLLELGF 428


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,277
Number of Sequences: 438
Number of extensions: 3235
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)