Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0697
(675 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 34 0.022
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 33 0.038
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 29 0.61
SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|c... 28 1.1
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 27 2.5
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 27 3.3
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.3
SPBC29A3.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 27 3.3
SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr 2... 26 4.3
SPAC24H6.12c |uba3||NEDD8 activating enzyme|Schizosaccharomyces ... 26 4.3
SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|c... 26 4.3
SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A |S... 26 5.7
SPAC3H8.06 |aur1||inositol phosphorylceramide synthase |Schizosa... 26 5.7
SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces p... 25 7.6
SPAC15A10.02 |taf12||transcription factor TFIID complex subunit ... 25 7.6
SPBPB10D8.04c |||membrane transporter |Schizosaccharomyces pombe... 25 7.6
SPBPB10D8.05c |||membrane transporter |Schizosaccharomyces pombe... 25 7.6
SPCC584.02 |cuf2||Cu metalloregulatory transcription factor Cuf2... 25 7.6
SPBPB10D8.06c |||membrane transporter |Schizosaccharomyces pombe... 25 7.6
SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid aminotr... 25 7.6
SPBPB10D8.07c |||membrane transporter |Schizosaccharomyces pombe... 25 7.6
SPCPB1C11.01 |amt1||ammonium transporter Amt1|Schizosaccharomyce... 25 7.6
SPBC15C4.03 |||Rab geranylgeranyltransferase escort protein |Sch... 25 10.0
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 25 10.0
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 33.9 bits (74), Expect = 0.022
Identities = 30/123 (24%), Positives = 53/123 (43%)
Frame = +1
Query: 31 SSSKIY*FRMACSVSDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVA 210
S SK+ +A S + ++ D P+ +T S L+ F+T + + + VLPS D
Sbjct: 26 SPSKVCRDNIALSEHNVITVLDTPQRSTQCDSLLKSFSTPLV----SGSEDVLPSPRDAL 81
Query: 211 TEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 390
+KS+ D + +S + T T NP +++ + N L + + H
Sbjct: 82 NITNKKSVTDNLLLSLTSSNQSTNT-NLNPSSRVEIINLNSSPPNSLSSQPKHQEFHLFH 140
Query: 391 TTT 399
T T
Sbjct: 141 TPT 143
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 33.1 bits (72), Expect = 0.038
Identities = 22/94 (23%), Positives = 30/94 (31%), Gaps = 1/94 (1%)
Frame = +3
Query: 264 PAEAHRDSGEEPASGQRRCRSGES-PPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRS 440
P H + GE GE PP P+ H + + P +
Sbjct: 274 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 333
Query: 441 GEGKEQIPERHRELRSH*AEAHGDVRKEPAPHKG 542
GE P +H EL H H ++ HKG
Sbjct: 334 GEHMPPPPFKHHELEEHEGPEHHRGPEDKEHHKG 367
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 29.1 bits (62), Expect = 0.61
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +3
Query: 219 DPEVF-IRRYREV*FEPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHD 395
DPE++ +RR P + D+ ++ + R G R RT+R DEA
Sbjct: 55 DPELYGLRRSGRTRSNPGR-YVDTDDQEDVFPSKHRKGTRNGSSFSRHRTIRDLDDEAES 113
Query: 396 DGRKESTAPDRSY 434
+ES + D SY
Sbjct: 114 VTSEESESDDSSY 126
>SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 28.3 bits (60), Expect = 1.1
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Frame = +1
Query: 97 LPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSA-------EDVATEKTQKSLFDGIEKF 255
L K +TDL +Q E FN C + D + +V A E V E+ + DG+E
Sbjct: 428 LNKWSTDLTTQTEVFNKLCDQVSDWDRTLVDNGALISKLYTETVEAEQMSNRIDDGLEYV 487
Query: 256 DSSQ 267
SSQ
Sbjct: 488 SSSQ 491
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 27.1 bits (57), Expect = 2.5
Identities = 13/62 (20%), Positives = 28/62 (45%)
Frame = +1
Query: 199 EDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKT 378
EDV E+ + + E D + ++ E + +N P+ + + G+E +D+T
Sbjct: 248 EDVDEEEEEDDDENNDEGDDEDENENDELRSENGSPNPSAAVINEQENMNMSGIEEYDET 307
Query: 379 QM 384
+
Sbjct: 308 NL 309
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 26.6 bits (56), Expect = 3.3
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -2
Query: 215 SVATSSADGSTIFSLVSTSRRQLVLKPSS*LFRSVATLGRSFRE 84
SV + DG + + +++RQ V+ P + F + +GR F+E
Sbjct: 86 SVVAFTKDGERLVGV--SAKRQAVINPENTFFATKRLIGRRFKE 127
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +3
Query: 354 RSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHRE 479
R+ + ++HD G S + DR + K++ +HRE
Sbjct: 710 RTERKKDTQKQSHDHGHSHSKSHDREKEKEKKKDREHRKHRE 751
>SPBC29A3.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 398
Score = 26.6 bits (56), Expect = 3.3
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Frame = +1
Query: 82 PSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGI----E 249
P K L K+ +L+S L+ SCL+D T+ K ++ +EKTQ+ +FD + +
Sbjct: 14 PGNKCLAKL-NELESILKDAKKSCLKDPTTSMKELV-----ACSEKTQQ-VFDDLKRTEK 66
Query: 250 KFDSSQLKHTETQEK 294
KF +S + +T EK
Sbjct: 67 KFHTSLNRFGKTLEK 81
>SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 426
Score = 26.2 bits (55), Expect = 4.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -1
Query: 222 GLLSGNVFSRRKHNLFIGVDVTETAGVEAFELTLQ 118
G ++G +S +LFIGVD G+ F LQ
Sbjct: 385 GEIAGTAYSSSGDSLFIGVDDPMLGGILEFRRPLQ 419
>SPAC24H6.12c |uba3||NEDD8 activating enzyme|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 444
Score = 26.2 bits (55), Expect = 4.3
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +1
Query: 478 NFDPTKLKHTETCEKNPLPTKDVIEQEKSAWNHYFITGTRKCI 606
NF+P ++H + K + + + S+ N +F+ G K I
Sbjct: 253 NFEPDNIRHIDWLVKRSIERANKFQIPSSSINRFFVQGIVKRI 295
>SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 355
Score = 26.2 bits (55), Expect = 4.3
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 166 DTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQN 345
D EK V S + E+ QK++ D E+ D + T T K+ + EK HQ
Sbjct: 131 DATEKFVTSSYKK-HREEVQKAIEDRKEE-DEKSITDTTTGMKDFYASM-LDRQEKIHQA 187
Query: 346 LLDGVEHFDKT 378
++GV++ KT
Sbjct: 188 AVEGVQNSKKT 198
>SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 660
Score = 25.8 bits (54), Expect = 5.7
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = +1
Query: 181 IVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPD 309
+ L S ED+ + T+ S+ + + +++HT + K +P+
Sbjct: 134 VALKSEEDIPSSVTRLSVVKLVNRVTYERMRHTMLEFKRSIPE 176
>SPAC3H8.06 |aur1||inositol phosphorylceramide synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 422
Score = 25.8 bits (54), Expect = 5.7
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Frame = +1
Query: 523 NPLPTKDVIEQEKSAWNH---YFITGTR--KCISLVSPHF 627
NP+PT ++ K +W H F+ G CI + SP F
Sbjct: 27 NPMPTFRLLRNTKWSWTHLQYVFLAGNLIFACIVIESPGF 66
>SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 25.4 bits (53), Expect = 7.6
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Frame = +3
Query: 423 DRSYRSGEGKEQIPERHRELRSH*AE----AHGDVRKEPAPHKG 542
D S R G +IP+RHR+ R + G R++P H G
Sbjct: 2 DLSSRLSSGSSRIPKRHRDYRDEEPRRERGSGGIGREDPRGHYG 45
>SPAC15A10.02 |taf12||transcription factor TFIID complex subunit A
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 450
Score = 25.4 bits (53), Expect = 7.6
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -3
Query: 322 RQRLCPEAGSSPESRCASAGSNQTSRYRRIKTSGSSQ 212
+QR+ PE S PE+ + +N ++ + TS + Q
Sbjct: 235 QQRINPETSSVPETPVGVSAANVSNESTELATSATQQ 271
>SPBPB10D8.04c |||membrane transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 25.4 bits (53), Expect = 7.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 224 WVFSVATSSADGSTIFSLVSTSRRQL 147
W+FSVA S IFS + T R ++
Sbjct: 122 WIFSVAMSFFTAWVIFSTILTKRAKI 147
>SPBPB10D8.05c |||membrane transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 25.4 bits (53), Expect = 7.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 224 WVFSVATSSADGSTIFSLVSTSRRQL 147
W+FSVA S IFS + T R ++
Sbjct: 122 WIFSVAMSFFTAWVIFSTILTKRAKI 147
>SPCC584.02 |cuf2||Cu metalloregulatory transcription factor
Cuf2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 25.4 bits (53), Expect = 7.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 187 LPSAEDVATEKTQKSLFDGIEKFDSSQLKHTE 282
LP +ED+ + SL D + D+SQL E
Sbjct: 117 LPISEDILGYRKPLSLTDASNRIDASQLNEKE 148
>SPBPB10D8.06c |||membrane transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 25.4 bits (53), Expect = 7.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 224 WVFSVATSSADGSTIFSLVSTSRRQL 147
W+FSVA S IFS + T R ++
Sbjct: 122 WIFSVAMSFFTAWVIFSTILTKRAKI 147
>SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid
aminotransferase Eca39|Schizosaccharomyces pombe|chr
2|||Manual
Length = 380
Score = 25.4 bits (53), Expect = 7.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 223 QKSLFDGIEKFDSSQLKHTETQEKNPLPD 309
Q + G + DSS +K T +E PLP+
Sbjct: 3 QTAALHGPKPMDSSHIKVTNVKELKPLPE 31
>SPBPB10D8.07c |||membrane transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 25.4 bits (53), Expect = 7.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 224 WVFSVATSSADGSTIFSLVSTSRRQL 147
W+FSVA S IFS + T R ++
Sbjct: 122 WIFSVAMSFFTAWVIFSTILTKRAKI 147
>SPCPB1C11.01 |amt1||ammonium transporter Amt1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 497
Score = 25.4 bits (53), Expect = 7.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 227 FWVFSVATSSADGSTIFSLVSTSRRQLVLKPSS 129
FW +S+ S G I SL + RQ + +PSS
Sbjct: 83 FWGYSLTFSHEGGPYIGSLANFGLRQTLGRPSS 115
>SPBC15C4.03 |||Rab geranylgeranyltransferase escort protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 459
Score = 25.0 bits (52), Expect = 10.0
Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +1
Query: 76 DTPSLKDLPKVATDLKSQL--EGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIE 249
D P+ D+ V T+L++ + + + R + +E + T + + + + I+
Sbjct: 2 DDPNSYDVIIVGTNLRNSILSAALSWANQRVLHIDENSFYGEIDGSLTLRDLEQINEKIK 61
Query: 250 KFDSSQLKHTETQEKNPL 303
K DSSQ+ + K+PL
Sbjct: 62 KVDSSQILNDNGSHKSPL 79
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 25.0 bits (52), Expect = 10.0
Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = +1
Query: 163 VDTNEKIVLPSA--EDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKA 336
+ T KI + S E+++ K + + Q HTE Q P++ V E
Sbjct: 391 MSTPPKIEIESKIEEEISVVSKSKEISSSVSSVGKEQ-NHTEKQVAIETPEQQKVEKEDE 449
Query: 337 HQNL 348
H NL
Sbjct: 450 HLNL 453
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.131 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,602,450
Number of Sequences: 5004
Number of extensions: 52804
Number of successful extensions: 226
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 226
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 309878492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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