Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0697
(675 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g29470.1 68414.m03605 dehydration-responsive protein-related ... 33 0.23
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 31 0.53
At5g60500.1 68418.m07587 undecaprenyl pyrophosphate synthetase f... 30 1.2
At3g53830.1 68416.m05947 regulator of chromosome condensation (R... 30 1.2
At5g22640.1 68418.m02645 MORN (Membrane Occupation and Recogniti... 30 1.6
At5g11110.1 68418.m01297 sucrose-phosphate synthase, putative si... 29 2.1
At1g70620.1 68414.m08138 cyclin-related contains weak similarity... 29 2.1
At5g51410.2 68418.m06374 LUC7 N_terminus domain-containing prote... 29 2.8
At5g51410.1 68418.m06373 LUC7 N_terminus domain-containing prote... 29 2.8
At2g17410.1 68415.m02009 ARID/BRIGHT DNA-binding domain-containi... 29 3.8
At5g53800.1 68418.m06685 expressed protein 28 5.0
At4g22290.1 68417.m03224 ubiquitin carboxyl-terminal hydrolase f... 28 5.0
At2g16940.1 68415.m01952 RNA recognition motif (RRM)-containing ... 28 5.0
At3g53640.1 68416.m05925 protein kinase family protein contains ... 28 6.6
At1g70620.2 68414.m08137 cyclin-related contains weak similarity... 28 6.6
At1g19000.2 68414.m02364 myb family transcription factor similar... 28 6.6
At1g19000.1 68414.m02363 myb family transcription factor similar... 28 6.6
At5g12410.1 68418.m01459 THUMP domain-containing protein contain... 27 8.7
At3g55580.1 68416.m06171 regulator of chromosome condensation (R... 27 8.7
At2g20950.1 68415.m02471 expressed protein 27 8.7
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 27 8.7
>At1g29470.1 68414.m03605 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 770
Score = 32.7 bits (71), Expect = 0.23
Identities = 24/107 (22%), Positives = 48/107 (44%)
Frame = +1
Query: 91 KDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQL 270
KD+ +D KS+ + D E V+ + T+ + + EK +S++
Sbjct: 57 KDVDTTKSDFKSEEVDRGSKSFPDEKNEETEVVTETNEEKTDPEKSGEENSGEKTESAE- 115
Query: 271 KHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKN 411
+ E +KN D+ EK ++ D + +KTQ++ ++ E K+
Sbjct: 116 ERKEFDDKNGDGDRKNGDGEKDTESESDETKQKEKTQLEESSEENKS 162
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 31.5 bits (68), Expect = 0.53
Identities = 20/86 (23%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +1
Query: 157 RDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKA 336
R+ + NE+ + + E E+ K+ + EK Q+K + +E+N K+V+ +
Sbjct: 744 REKEENERRIKEAREKAELEQRLKATLEQEEK--ERQIKERQEREENERRAKEVLEQAEN 801
Query: 337 HQNLLDGVEHFD-KTQMKHTTTEEKN 411
+ L + +E + + ++K T +E+N
Sbjct: 802 ERKLKEALEQKENERRLKETREKEEN 827
>At5g60500.1 68418.m07587 undecaprenyl pyrophosphate synthetase
family protein / UPP synthetase family protein contains
putative undecaprenyl diphosphate synthase domain
[PF01255]; similar to S. cerevisiae dehydrodolichyl
diphosphate synthetase (DEDOL-PP
synthase)(Rer2)[SP|P35196], a cis-prenyltransferase
Length = 271
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 219 LLSGNVFSRRKHNLFIGVDVTETAGVEAFELTLQVCGDLG 100
++ GN +KHNL IG+D AG + + LQ C ++G
Sbjct: 41 IMDGNRRFAKKHNL-IGLDAGHRAGFISVKYILQYCKEIG 79
>At3g53830.1 68416.m05947 regulator of chromosome condensation
(RCC1) family protein / UVB-resistance protein-related
contains Pfam PF00415 : Regulator of chromosome
condensation (RCC1); similar to UVB-resistance protein
UVR8 (GIi;10177674) [Arabidopsis thaliana]
Length = 487
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 499 KHTETCEKNPLPTKDVIEQEKSAWNH 576
KH ET E PLPT+ + Q S W H
Sbjct: 91 KHGETPEPFPLPTEAPVVQASSGWAH 116
>At5g22640.1 68418.m02645 MORN (Membrane Occupation and Recognition
Nexus) repeat-containing protein contains Pfam profile
PF02493: MORN repeat
Length = 871
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +1
Query: 214 EKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHT 393
EK+ K + DG+EK+ + K E +++ + ++V AE L + +E D+ K
Sbjct: 581 EKSVKPMLDGLEKWTEEKKKAYEERKEMIQQELELVEAEIC---LEEAIEDMDEELKKKE 637
Query: 394 TTEEK 408
EEK
Sbjct: 638 QEEEK 642
>At5g11110.1 68418.m01297 sucrose-phosphate synthase, putative
similar to sucrose-phosphate synthase isoform 1, Citrus
unshiu, PIR:S72648
Length = 894
Score = 29.5 bits (63), Expect = 2.1
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +1
Query: 67 SVSDTPS--LKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVA-TEKTQKSLF 237
S SD+PS L+D+ ++ +LK L+G + VDTN +AE A EK +L
Sbjct: 532 SDSDSPSDSLRDINDISLNLKLSLDGEKSGSNNGVDTNLDAEDRAAERKAEVEKAVSTLA 591
Query: 238 D---GIEKFDS 261
EKFDS
Sbjct: 592 QKSKPTEKFDS 602
>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 897
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +3
Query: 282 DSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQI 461
+S ++ R R SP R + SDE+ DD +++S++ ++ GK +
Sbjct: 794 ESSDDSKRKSRSRRRSVSPSPVRSRRKRSSPSSDESSDDSKRKSSSKRKNRSPSPGKSR- 852
Query: 462 PERHRELRS 488
RH RS
Sbjct: 853 -RRHVSSRS 860
>At5g51410.2 68418.m06374 LUC7 N_terminus domain-containing protein
similar to cisplatin resistance-associated overexpressed
protein [Homo sapiens] GI:6899846; contains Pfam profile
PF03194: LUC7 N_terminus
Length = 334
Score = 29.1 bits (62), Expect = 2.8
Identities = 23/69 (33%), Positives = 27/69 (39%)
Frame = +3
Query: 321 RSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHRELRSH*AE 500
RSG S E R R +D D D GR DR RSG + +R R H
Sbjct: 266 RSGSSDRERY-RDRDRNRDGDRHRDRGRDYRKPYDRRSRSG---REDRDRSRSRSPHGRS 321
Query: 501 AHGDVRKEP 527
H V + P
Sbjct: 322 GHRRVSRSP 330
>At5g51410.1 68418.m06373 LUC7 N_terminus domain-containing protein
similar to cisplatin resistance-associated overexpressed
protein [Homo sapiens] GI:6899846; contains Pfam profile
PF03194: LUC7 N_terminus
Length = 334
Score = 29.1 bits (62), Expect = 2.8
Identities = 23/69 (33%), Positives = 27/69 (39%)
Frame = +3
Query: 321 RSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHRELRSH*AE 500
RSG S E R R +D D D GR DR RSG + +R R H
Sbjct: 266 RSGSSDRERY-RDRDRNRDGDRHRDRGRDYRKPYDRRSRSG---REDRDRSRSRSPHGRS 321
Query: 501 AHGDVRKEP 527
H V + P
Sbjct: 322 GHRRVSRSP 330
>At2g17410.1 68415.m02009 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 786
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +1
Query: 67 SVSDTPSLKDLPKVATDLKSQLEGF---NTSCLRDVDTNEKIVLPSAEDVATEKTQKS 231
S+ + + DLPK+ + SQ E + S +DT E ++ P+AED E S
Sbjct: 78 SLEEVTNADDLPKIDDEKNSQFETSPHPSPSPSVALDTEEGLINPTAEDTVEENIVSS 135
>At5g53800.1 68418.m06685 expressed protein
Length = 351
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/72 (27%), Positives = 27/72 (37%)
Frame = +3
Query: 270 EAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEG 449
E+ +S +E R+ R RSR R+D + D ES + Y E
Sbjct: 67 ESGSESEKEERRRSRKDRGKRKSDRKSSRSRRRRRDYSSSSSDSESES---ESEYSDSEE 123
Query: 450 KEQIPERHRELR 485
E ER R R
Sbjct: 124 SESEDERRRRKR 135
>At4g22290.1 68417.m03224 ubiquitin carboxyl-terminal hydrolase
family protein similar to pVHL-interacting
deubiquitinating enzyme 1 type II [Homo sapiens]
GI:18698435; contains Pfam profile PF00443: Ubiquitin
carboxyl-terminal hydrolase
Length = 974
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = +3
Query: 291 EEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEG 449
E +R +SPP PLG + L ++ DD +E +S G G
Sbjct: 446 EREVKRKRVMERSDSPPPPLGFNNPLLPLANTYDDDDEEEENEQKKSQARGNG 498
>At2g16940.1 68415.m01952 RNA recognition motif (RRM)-containing
protein
Length = 561
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 1/96 (1%)
Frame = +3
Query: 276 HRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKE 455
H ++ G + +S R R ++ + +DGR+ + RS+ ++
Sbjct: 17 HLENEVGNGGGDEKVKSEGKERSRSSRHRGDKKKERDEDEDGRRSKRS--RSHHRSRSRD 74
Query: 456 QIPERHRELRSH-*AEAHGDVRKEPAPHKGRH*ARE 560
+ +RHR R H + DV KE K R R+
Sbjct: 75 RERDRHRSSREHRDRDREKDVDKEERNGKDRERDRD 110
>At3g53640.1 68416.m05925 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 642
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/55 (25%), Positives = 22/55 (40%)
Frame = +3
Query: 279 RDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSG 443
R+S + G+ S GR + D+ D GR+E + Y+SG
Sbjct: 82 RESNRDNYRGRSSRDKARSSSRETGRENERERRKDQDRDRGRREDQSDQEIYKSG 136
>At1g70620.2 68414.m08137 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide I)
[Bos taurus]
Length = 884
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +3
Query: 282 DSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQ 458
+S ++ R R SP R + SDE+ DD +++S++ ++ GK +
Sbjct: 824 ESSDDSKRKSRSRRRSVSPSPVRSRRKRSSPSSDESSDDSKRKSSSKRKNRSPSPGKSR 882
>At1g19000.2 68414.m02364 myb family transcription factor similar to
MybSt1 GI:7705206 from [Solanum tuberosum]
Length = 285
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 217 KTQKSLFD-GIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLD 354
+ + SLFD E ++ TQE +PLP+ ++ + ++A Q D
Sbjct: 158 RRRSSLFDITTETVTEMAMEQDPTQENSPLPETNISSGQQAMQVFTD 204
>At1g19000.1 68414.m02363 myb family transcription factor similar to
MybSt1 GI:7705206 from [Solanum tuberosum]
Length = 285
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 217 KTQKSLFD-GIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLD 354
+ + SLFD E ++ TQE +PLP+ ++ + ++A Q D
Sbjct: 158 RRRSSLFDITTETVTEMAMEQDPTQENSPLPETNISSGQQAMQVFTD 204
>At5g12410.1 68418.m01459 THUMP domain-containing protein contains
Pfam profile PF02926: THUMP domain
Length = 376
Score = 27.5 bits (58), Expect = 8.7
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1
Query: 166 DTNEKIVLPSAEDVATEKTQKSLFDGI-EKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQ 342
D ++ +V D+ EK S +G+ ++ + ++ + E L + + V E+
Sbjct: 110 DGDKAVVSEGGNDLVNEKEIAS--EGVNDQVNEKEIASEGSCEVKQLAENETVKEEEDKG 167
Query: 343 NLLDGVEHFDKTQMKHTTTEEKNPL 417
N +G D+ K T TEE NPL
Sbjct: 168 NQKNGG---DEPPRKKTCTEEANPL 189
>At3g55580.1 68416.m06171 regulator of chromosome condensation
(RCC1) family protein UVB-resistance protein UVR8,
Arabidopsis thaliana, EMBL:AF130441; contains Pfam
PF00415: Regulator of chromosome condensation (RCC1)
domain
Length = 488
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 490 TKLKHTETCEKNPLPTKDVIEQEKSAWNH 576
T KH ET E PLP + +++ ++ W H
Sbjct: 100 TSGKHGETPEPFPLPPEVCVQKAEAGWAH 128
>At2g20950.1 68415.m02471 expressed protein
Length = 520
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 420 PDRSYRSGEGKEQIPERHRELRSH*AEAHGDVRKEPAPHKGRH*AREISLE 572
PDR RS E +++ ER E ++ + H + PAP+ R+ S E
Sbjct: 120 PDRRKRSSEITKELYERMYEADANVSPFHPFRSRSPAPYNTHERGRDYSRE 170
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 261 EPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDE 386
+P + R +GE P RR RS + P+ +R SDE
Sbjct: 582 DPRKTSRQTGETPVISTRRARSTPARVMPIVLNRDSNVTSDE 623
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.131 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,963,701
Number of Sequences: 28952
Number of extensions: 295105
Number of successful extensions: 1224
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1223
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1432596384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -