Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0695
(736 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 3.0
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 22 6.9
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 22 6.9
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 6.9
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 22 6.9
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 22 6.9
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 9.1
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 9.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 9.1
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 9.1
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 21 9.1
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.0 bits (47), Expect = 3.0
Identities = 8/17 (47%), Positives = 11/17 (64%), Gaps = 2/17 (11%)
Frame = -1
Query: 421 SPPPDEWGPSSN--FCM 377
SPPP++W P FC+
Sbjct: 415 SPPPEDWKPLDKCYFCL 431
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 453 VESHGQLRMMHHHLQMNGV 397
++ H L+ HHHLQ V
Sbjct: 138 LQRHHHLQNHHHHLQSTAV 156
Score = 21.8 bits (44), Expect = 6.9
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = -2
Query: 492 RWK*FQEGLFHPLVESHGQLRMMHHHL 412
RWK +Q+ L+ S HH L
Sbjct: 45 RWKQYQDTLYSGTRSSESLTAQAHHRL 71
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 21.8 bits (44), Expect = 6.9
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 546 LDLLANYFTVETTPKWGLYQYHVDISPEKDSTG 644
LD LA +FT KW + V+I +K G
Sbjct: 86 LDKLAEWFTTNEPEKW---NHFVEIMIKKKDEG 115
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 21.8 bits (44), Expect = 6.9
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 5/35 (14%)
Frame = -1
Query: 382 CMRCCTSISPGCSCVVGVTR-----CEARPACAVG 293
C++ C +PGC C +G R C R C G
Sbjct: 63 CIKIC---APGCVCRLGYLRNKKKVCVPRSKCLPG 94
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.9
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -3
Query: 494 QDGNSFRKDSSTPSSR 447
+DGNS+R D SR
Sbjct: 240 EDGNSYRNDGERSCSR 255
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 21.8 bits (44), Expect = 6.9
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 546 LDLLANYFTVETTPKWGLYQYHVDISPEKDSTG 644
LD LA +FT KW + V+I +K G
Sbjct: 86 LDKLAEWFTTNEPEKW---NHFVEIMIKKKDEG 115
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.8 bits (44), Expect = 6.9
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 678 FYCEHASVPFGLQCCLFLEKYRRDID 601
FY E + GL+C FL + D D
Sbjct: 800 FYSEESINNQGLECLRFLNEVISDFD 825
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 9.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 398 SQF*FLHALLHIDISWM 348
SQ+ FL+A+ H D W+
Sbjct: 128 SQYEFLNAIHHYDDIWL 144
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 9.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 398 SQF*FLHALLHIDISWM 348
SQ+ FL+A+ H D W+
Sbjct: 128 SQYEFLNAIHHYDDIWL 144
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 9.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 398 SQF*FLHALLHIDISWM 348
SQ+ FL+A+ H D W+
Sbjct: 179 SQYEFLNAIHHYDDIWL 195
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 9.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 398 SQF*FLHALLHIDISWM 348
SQ+ FL+A+ H D W+
Sbjct: 128 SQYEFLNAIHHYDDIWL 144
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 247 GDHNPVFLQ 273
GDH PVFL+
Sbjct: 375 GDHKPVFLE 383
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,750
Number of Sequences: 438
Number of extensions: 3722
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -