Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0694
         (603 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   2.5  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    23   5.8  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   5.8  
AF515525-1|AAM61892.1|  235|Anopheles gambiae glutathione S-tran...    23   5.8  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +1

Query: 241  NFDLLSQGQQ-KTDSGDKK*PLISLQ*VAQELATDNRNSISTMSELLAYSIISNTQSHYS 417
            N D L Q  + + D+  K   L S   + QE+   NR+ I+   ++   S +S  ++ YS
Sbjct: 1055 NLDELRQATRLRVDAKSKS--LDSCSDILQEVPNLNRDLINLFRQMPKVSELSENETEYS 1112

Query: 418  SN 423
            S+
Sbjct: 1113 SS 1114


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 12/49 (24%), Positives = 23/49 (46%)
 Frame = -3

Query: 355 YYFCYQWLAPVLLIVEILKVIFCHRSRFFAVLETKDRSSIVKSNQNREI 209
           Y+   +WL  V +++ +L V+F        V   K +  I K+   +E+
Sbjct: 152 YFTFLRWLFSVNIVISVLLVVFIMVPEEIYVDPEKAKCDIRKTMSKQEL 200


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 531  HYCFTAEIGRAMVPTRADS*EILP 460
            H  F AEIG ++V    DS E+LP
Sbjct: 939  HIEFHAEIGMSLVLKVGDSSEMLP 962


>AF515525-1|AAM61892.1|  235|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 235

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 388 WSRLRVRSLY*YYFCYQWLAPVL 320
           W  L +R+    YF + WL P+L
Sbjct: 104 WQHLNLRADVSLYFFHVWLNPLL 126


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,453
Number of Sequences: 2352
Number of extensions: 11112
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)