Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0694
         (603 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical ...    29   2.6  
AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical ...    29   2.6  
AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical ...    29   2.6  
U80025-1|AAD32271.1| 1064|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical pr...    27   7.8  
AC006610-6|AAK85452.1|  395|Caenorhabditis elegans Hypothetical ...    27   7.8  

>Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical
           protein F36H2.1c protein.
          Length = 1071

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +1

Query: 64  MFKKKTCPENNNKARIGHMVHNQFGLLTKKKYHFKRSHI 180
           + +  T PE     RI  ++ ++ G LTK + HFK+ H+
Sbjct: 420 VIRSSTIPEE--LGRISFLLSDKTGTLTKNEMHFKKIHL 456


>Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical
           protein F36H2.1b protein.
          Length = 1035

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +1

Query: 64  MFKKKTCPENNNKARIGHMVHNQFGLLTKKKYHFKRSHI 180
           + +  T PE     RI  ++ ++ G LTK + HFK+ H+
Sbjct: 384 VIRSSTIPEE--LGRISFLLSDKTGTLTKNEMHFKKIHL 420


>Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical
           protein F36H2.1a protein.
          Length = 1074

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +1

Query: 64  MFKKKTCPENNNKARIGHMVHNQFGLLTKKKYHFKRSHI 180
           + +  T PE     RI  ++ ++ G LTK + HFK+ H+
Sbjct: 423 VIRSSTIPEE--LGRISFLLSDKTGTLTKNEMHFKKIHL 459


>AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical
           protein F36H2.1c protein.
          Length = 1071

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +1

Query: 64  MFKKKTCPENNNKARIGHMVHNQFGLLTKKKYHFKRSHI 180
           + +  T PE     RI  ++ ++ G LTK + HFK+ H+
Sbjct: 420 VIRSSTIPEE--LGRISFLLSDKTGTLTKNEMHFKKIHL 456


>AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical
           protein F36H2.1b protein.
          Length = 1035

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +1

Query: 64  MFKKKTCPENNNKARIGHMVHNQFGLLTKKKYHFKRSHI 180
           + +  T PE     RI  ++ ++ G LTK + HFK+ H+
Sbjct: 384 VIRSSTIPEE--LGRISFLLSDKTGTLTKNEMHFKKIHL 420


>AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical
           protein F36H2.1a protein.
          Length = 1074

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +1

Query: 64  MFKKKTCPENNNKARIGHMVHNQFGLLTKKKYHFKRSHI 180
           + +  T PE     RI  ++ ++ G LTK + HFK+ H+
Sbjct: 423 VIRSSTIPEE--LGRISFLLSDKTGTLTKNEMHFKKIHL 459


>U80025-1|AAD32271.1| 1064|Caenorhabditis elegans Hypothetical
           protein F02C9.3 protein.
          Length = 1064

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 70  KKKTCPENNNKARIGHMVHNQFGLLTKKKYHFKRSHI 180
           +  T PE     RI  ++ ++ G LTK + HFK+ H+
Sbjct: 415 RSSTIPEE--LGRISFLLSDKTGTLTKNEMHFKKIHL 449


>U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical
           protein F37A4.4 protein.
          Length = 1163

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 22/68 (32%), Positives = 33/68 (48%)
 Frame = +1

Query: 88  ENNNKARIGHMVHNQFGLLTKKKYHFKRSHISRRCLSVTTGFPDSDLILRLNFDLLSQGQ 267
           ++ NK   G ++ +   L  K  Y    S+ S R L +T GFP+S  + R+  DL S   
Sbjct: 255 DHRNKGNTGKLLQSAITLFKKTVY----SNSSTR-LFLTAGFPESGDMKRVAKDLTSDWF 309

Query: 268 QKTDSGDK 291
           +K  S  K
Sbjct: 310 KKKVSRGK 317


>AC006610-6|AAK85452.1|  395|Caenorhabditis elegans Hypothetical
           protein C30F12.6 protein.
          Length = 395

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = +2

Query: 71  KKKHVRKIIIKLESVIWFIISLVC 142
           +  H  KI+  L+ V+W+++ ++C
Sbjct: 190 RNSHAYKIVFLLDFVLWYVLPIMC 213


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,891,915
Number of Sequences: 27780
Number of extensions: 255368
Number of successful extensions: 576
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)