Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0693
         (790 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.69 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   2.8  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   3.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.7  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   4.9  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   4.9  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   4.9  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    22   4.9  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   6.4  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   6.4  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   8.5  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = +2

Query: 422 YVPCI*RTHACILFIVKLLFL 484
           Y P + + +AC+L +VK+L++
Sbjct: 39  YYPSLAKCYACLLMVVKILWV 59


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = +3

Query: 510 ILFVFVNIFYSVVL 551
           ++F+FVN+F+ V++
Sbjct: 97  LIFIFVNVFFWVII 110


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 581 ILYFYYHKCRQNYTIKNINKDKQYL 507
           +LY+ Y K    +  KN+  DK +L
Sbjct: 12  LLYYIYSKHYSYWQSKNVPTDKPFL 36


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = +3

Query: 201 LILT*SGYYCIDIIMCF*FISFVYLIN*ISILFI 302
           L+ T   YY   I++C  +  + ++I  + +LF+
Sbjct: 97  LLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFL 130


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 569 KSIKYDHNSVQTYNSN*L*SNFDY 640
           + ++Y +++ Q YNSN L + + Y
Sbjct: 58  QQLQYGYHNHQNYNSNVLSNGYGY 81


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 569 KSIKYDHNSVQTYNSN*L*SNFDY 640
           + ++Y +++ Q YNSN L + + Y
Sbjct: 58  QQLQYGYHNHQNYNSNVLSNGYGY 81


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 569 KSIKYDHNSVQTYNSN*L*SNFDY 640
           + ++Y +++ Q YNSN L + + Y
Sbjct: 58  QQLQYGYHNHQNYNSNVLSNGYGY 81


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 569 KSIKYDHNSVQTYNSN*L*SNFDY 640
           + ++Y +++ Q YNSN L + + Y
Sbjct: 58  QQLQYGYHNHQNYNSNVLSNGYGY 81


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 250 SNSFPLYI*LIELVYCSFSICI 315
           S+ FP YI    +V+C   +C+
Sbjct: 60  SSVFPNYIRTTSMVFCIIIMCL 81


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 250 SNSFPLYI*LIELVYCSFSICI 315
           S+ FP YI    +V+C   +C+
Sbjct: 60  SSVFPNYIRTTSMVFCIIIMCL 81


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 289 VYCSFSICIVELFVC 333
           V  +FSICI + + C
Sbjct: 240 VLSTFSICITQFYYC 254


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,677
Number of Sequences: 336
Number of extensions: 3691
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)