Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0693
         (790 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54284-2|CAA91060.2|  157|Caenorhabditis elegans Hypothetical pr...    31   0.71 
U42835-2|AAA83586.1|  617|Caenorhabditis elegans Chitinase prote...    28   6.6  
Z69790-4|CAA93655.1|  282|Caenorhabditis elegans Hypothetical pr...    28   8.8  
Z36752-1|CAA85323.2|  150|Caenorhabditis elegans Hypothetical pr...    28   8.8  

>Z54284-2|CAA91060.2|  157|Caenorhabditis elegans Hypothetical
           protein D2085.2 protein.
          Length = 157

 Score = 31.5 bits (68), Expect = 0.71
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -3

Query: 602 FVHYYDRILYFYYHKCRQNYTIKNINKDKQYLIS 501
           + H +  +LY+  H C  +  +K +N D+ YL+S
Sbjct: 106 YEHPFMGVLYYNIHPCNTSNIMKELNTDRSYLMS 139


>U42835-2|AAA83586.1|  617|Caenorhabditis elegans Chitinase protein
           1 protein.
          Length = 617

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +2

Query: 626 SNFDYCATTSFNKCLLTERKANDLLNTGGRTSWEPARVGTTTSPIF 763
           ++  YC T++ + C +T  +A         T     R  TTT+P F
Sbjct: 519 ASLKYCTTSTASGCSVTTTRAPTTTTKSAPTVTTTTRAPTTTTPAF 564


>Z69790-4|CAA93655.1|  282|Caenorhabditis elegans Hypothetical
           protein F33C8.3 protein.
          Length = 282

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 323 CLCADYCIIIILWIFSEINVXXXXXXXRKHYTHYV 427
           C  A +C I+IL  F E+         ++H  HYV
Sbjct: 84  CALAFFCCILILAFFLELAAAVTLFHKQEHIKHYV 118


>Z36752-1|CAA85323.2|  150|Caenorhabditis elegans Hypothetical
           protein F35H8.1 protein.
          Length = 150

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 8/47 (17%)
 Frame = -3

Query: 617 NWNCKFVHYYDRILYFYYHKCRQNYTI--------KNINKDKQYLIS 501
           +W     H+ D  LYF  H   Q+  I        K I KD++Y+++
Sbjct: 90  DWKVTNAHFNDNTLYFNIHNYNQHLAIYPDLEFEAKKIGKDERYILT 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,325,236
Number of Sequences: 27780
Number of extensions: 315177
Number of successful extensions: 631
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)