Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0692
         (710 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.4  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   1.9  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    23   2.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.9  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 165 TFLRWVNSTSN*LQTLYNYFRL*HYS*IFFTLLRLV 58
           T+L +   T   +Q   NY  L HY  +FFT+  +V
Sbjct: 501 TYLMFDYCTVLRVQRFNNYQSLAHYLRVFFTVFNVV 536



 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = +3

Query: 210 WSKLKFCSCAVSVFYPQFRCICVEGMLDVGTVSNVGKQKHEL 335
           W+++ + + A   F      +C      +GTVS  G+  H++
Sbjct: 277 WTRIAYMALASVPFIFDSIHLCDVCYSTIGTVSKAGELIHQI 318


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -1

Query: 584 NFLLNIFDFIFGFFQVYYFNGYNLLGSIVH 495
           NF       +FG  Q+Y F+G+ +   +V+
Sbjct: 75  NFQFGSILALFGVVQIYIFSGFIVPSGVVY 104


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -2

Query: 421 FSL-KAITLAGLLLRPTFSIYLFTMCIKTNSSCFCF 317
           FSL KAI +  + +R TFS     + I   S+ F F
Sbjct: 83  FSLCKAILVHAITIRSTFSWTFIDVFIMLTSTAFVF 118


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = -1

Query: 146 TARLTSYRHFIIIFDFDTTH 87
           +++  ++ HF+I+F  +T H
Sbjct: 158 SSKKPAFSHFLIVFFTETLH 177


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = -1

Query: 146 TARLTSYRHFIIIFDFDTTH 87
           +++  ++ HF+I+F  +T H
Sbjct: 158 SSKKPAFSHFLIVFFTETLH 177


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = -1

Query: 146 TARLTSYRHFIIIFDFDTTH 87
           +++  ++ HF+I+F  +T H
Sbjct: 158 SSKKPAFSHFLIVFFTETLH 177


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = -1

Query: 146 TARLTSYRHFIIIFDFDTTH 87
           +++  ++ HF+I+F  +T H
Sbjct: 158 SSKKPAFSHFLIVFFTETLH 177


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,225
Number of Sequences: 336
Number of extensions: 3266
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)