Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0692
(710 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42709| Best HMM Match : No HMM Matches (HMM E-Value=.) 107 1e-23
SB_3739| Best HMM Match : Pkinase (HMM E-Value=0) 37 0.014
SB_25961| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.025
SB_47182| Best HMM Match : Pkinase (HMM E-Value=1e-09) 36 0.043
SB_31870| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_42528| Best HMM Match : Pkinase (HMM E-Value=1.3e-13) 34 0.13
SB_19785| Best HMM Match : SRR1 (HMM E-Value=8.8e-19) 33 0.30
SB_29640| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.92
SB_54944| Best HMM Match : Gal_Lectin (HMM E-Value=9.5e-05) 31 0.92
SB_42336| Best HMM Match : Sushi (HMM E-Value=1.5e-08) 30 2.1
SB_55249| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_43344| Best HMM Match : Pkinase (HMM E-Value=6.9e-08) 29 2.8
SB_33664| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_25818| Best HMM Match : Pkinase (HMM E-Value=1.7e-20) 29 2.8
SB_33663| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_23777| Best HMM Match : Pkinase (HMM E-Value=0.065) 29 3.7
SB_17071| Best HMM Match : Pkinase (HMM E-Value=0.065) 29 3.7
SB_22062| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_28514| Best HMM Match : MazG (HMM E-Value=6) 28 6.5
SB_14132| Best HMM Match : dCMP_cyt_deam (HMM E-Value=7.6e-05) 28 6.5
SB_44532| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_43658| Best HMM Match : Pkinase (HMM E-Value=1.49939e-42) 28 8.6
SB_38533| Best HMM Match : Pkinase (HMM E-Value=0.15) 28 8.6
SB_33662| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_31780| Best HMM Match : Pkinase (HMM E-Value=0) 28 8.6
SB_10837| Best HMM Match : Pkinase (HMM E-Value=1.49939e-42) 28 8.6
>SB_42709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1616
Score = 107 bits (256), Expect = 1e-23
Identities = 52/86 (60%), Positives = 58/86 (67%)
Frame = +3
Query: 420 KVDPELIFTKQEKIGKGSFGEVFKGVDNRTQQVVXXXXXXXXXXXXXXXXXXXXXMVLSQ 599
K DPE +F+K E+IGKGSFGEVFKG+DNRT +VV VLSQ
Sbjct: 805 KADPEKLFSKLERIGKGSFGEVFKGIDNRTNEVVAIKIIDLEEAEDEIEDIQQEITVLSQ 864
Query: 600 CDSPYVT*YYGSYLKGTKLWIIMEYL 677
CDS YVT Y+GSYLKGTKLWIIMEYL
Sbjct: 865 CDSLYVTKYHGSYLKGTKLWIIMEYL 890
>SB_3739| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 490
Score = 37.1 bits (82), Expect = 0.014
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +3
Query: 456 KIGKGSFGEVFKGVDNRTQQVVXXXXXXXXXXXXXXXXXXXXXMVLSQCDSPYVT*YYGS 635
KIG+GS G V D RT + V +++ P + YGS
Sbjct: 223 KIGEGSTGIVCLATDKRTGRQVAVKKMDLKKQQRRELLFNEV-VIMRDYPHPNIVEMYGS 281
Query: 636 YLKGTKLWIIMEYL 677
+L G +LW++ME+L
Sbjct: 282 HLVGDELWVVMEFL 295
>SB_25961| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 36.3 bits (80), Expect = 0.025
Identities = 20/81 (24%), Positives = 36/81 (44%)
Frame = +3
Query: 441 FTKQEKIGKGSFGEVFKGVDNRTQQVVXXXXXXXXXXXXXXXXXXXXXMVLSQCDSPYVT 620
F K ++G G+ G V K + T ++ VL C+SPY+
Sbjct: 70 FEKITELGAGNGGVVTKVLHKPTGLIMARKLIHLEVKPAIRTQIIRELKVLHDCNSPYIV 129
Query: 621 *YYGSYLKGTKLWIIMEYLRR 683
++G++ ++ I ME++RR
Sbjct: 130 GFFGAFYSDGEISICMEHMRR 150
>SB_47182| Best HMM Match : Pkinase (HMM E-Value=1e-09)
Length = 198
Score = 35.5 bits (78), Expect = 0.043
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 429 PELIFTKQEKIGKGSFGEVFKGVDNRTQQVV 521
PE +F EK+G+GS+G VFK + + QVV
Sbjct: 20 PEEVFDVLEKLGEGSYGSVFKAMHKESGQVV 50
>SB_31870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1378
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 585 MVLSQCDSPYVT*YYGSYLKGTKLWIIMEYL 677
+V+ + P + Y SYL G +LW++MEYL
Sbjct: 269 LVMRENKHPNIVNYVDSYLVGEELWVVMEYL 299
>SB_42528| Best HMM Match : Pkinase (HMM E-Value=1.3e-13)
Length = 255
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/75 (21%), Positives = 33/75 (44%)
Frame = +3
Query: 453 EKIGKGSFGEVFKGVDNRTQQVVXXXXXXXXXXXXXXXXXXXXXMVLSQCDSPYVT*YYG 632
E +G G+ G V+K + T++++ + QC SPY+ +YG
Sbjct: 42 EILGYGNGGTVYKAIHLTTRRIIAVKVIPLDVTPEVQRQIISEMEISFQCASPYIIEFYG 101
Query: 633 SYLKGTKLWIIMEYL 677
++ ++ + EY+
Sbjct: 102 AFFVENRISMCTEYM 116
>SB_19785| Best HMM Match : SRR1 (HMM E-Value=8.8e-19)
Length = 735
Score = 32.7 bits (71), Expect = 0.30
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 426 DPELIFTKQEKIGKGSFGEVFKGVDNRTQQVV 521
DPE I+ +IG GSFG V+ + RT +VV
Sbjct: 457 DPEKIYADLREIGHGSFGAVYYARNVRTNEVV 488
>SB_29640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 31.1 bits (67), Expect = 0.92
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3
Query: 453 EKIGKGSFGEVFKGVDNRTQQVV 521
E +GKGSFG+V K +D++T Q V
Sbjct: 291 EVLGKGSFGQVVKALDHKTGQHV 313
>SB_54944| Best HMM Match : Gal_Lectin (HMM E-Value=9.5e-05)
Length = 392
Score = 31.1 bits (67), Expect = 0.92
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 390 SYSVRPSQFIYSRCVSKQIVHAFVFQHWKQSRH 292
SY S ++SRC+ KQ+ H + H SRH
Sbjct: 31 SYEKDTSALVFSRCLIKQLTHQLMRPHSTVSRH 63
>SB_42336| Best HMM Match : Sushi (HMM E-Value=1.5e-08)
Length = 303
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/77 (23%), Positives = 31/77 (40%)
Frame = -2
Query: 523 ATTCWVLLSTPLNTSPKEPLPIFSCFVKISSGSTFSLKAITLAGLLLRPTFSIYLFTMCI 344
AT W ++ TP P P +C ++ + ++GLL +P ++ T+
Sbjct: 206 ATGTWSVVQTPFRCKKVYPKPTLTCPTDVTVDLGPTESTADVSGLLGKPLSNVQQVTVSP 265
Query: 343 KTNSSCFCFPTLETVPT 293
S + FP T T
Sbjct: 266 AKYSDYYIFPAGSTALT 282
>SB_55249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +3
Query: 384 SKSPARVMAFSEKVDPELIFTKQEKIGKGSFGEVFK 491
SK+P + + EK E+ F+ ++ IG+G+FG V+K
Sbjct: 281 SKAPHQTLPVIEK--SEVTFSARDVIGRGAFGTVYK 314
>SB_43344| Best HMM Match : Pkinase (HMM E-Value=6.9e-08)
Length = 424
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/96 (21%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Frame = +3
Query: 423 VDPELIFTKQEKIGKGSFGEVFKGVDNRTQQVVXXXXXXXXXXXXXXXXXXXXXMVLSQC 602
+DP + + E IG+G++GEV+K + +T ++ ++
Sbjct: 51 LDPPVDWQLVESIGEGTYGEVYKVRNVKTGEIA-AAKVIDSILEKIEEVLPELEILKKFS 109
Query: 603 DSPYVT*YYGSYL-----KGTKLWIIM---EYLRRR 686
D P + ++G+++ + +LW++M EYL R+
Sbjct: 110 DHPNIAGFHGAFIQRDPNRQDQLWLVMEGVEYLHRK 145
>SB_33664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 525
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 450 QEKIGKGSFGEVFKGVDNRTQQV 518
Q+K+G+G FGEV+ G+ N T V
Sbjct: 262 QKKLGQGQFGEVWSGLWNSTTPV 284
>SB_25818| Best HMM Match : Pkinase (HMM E-Value=1.7e-20)
Length = 956
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 591 LSQCDSPYVT*YYGSYLKGTKLWIIMEYL 677
+SQC+ V YY S++ +LWI+M L
Sbjct: 747 MSQCNHENVVNYYTSFVVRQELWIVMRLL 775
>SB_33663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +3
Query: 450 QEKIGKGSFGEVFKGVDNRTQQV 518
Q+++G G+FGEV++GV N T V
Sbjct: 255 QKRLGAGNFGEVWQGVWNDTTPV 277
>SB_23777| Best HMM Match : Pkinase (HMM E-Value=0.065)
Length = 97
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 441 FTKQEKIGKGSFGEVFKGVDNRTQQVV 521
F K KIG+GS+G VFK T Q+V
Sbjct: 4 FEKLGKIGEGSYGVVFKCRHKETGQIV 30
>SB_17071| Best HMM Match : Pkinase (HMM E-Value=0.065)
Length = 97
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 441 FTKQEKIGKGSFGEVFKGVDNRTQQVV 521
F K KIG+GS+G VFK T Q+V
Sbjct: 4 FEKLGKIGEGSYGVVFKCRHKETGQIV 30
>SB_22062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 275
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 343 KTNSSCFCFPTLETVPTSSIPSTQ 272
KT++ C P+L T+PT S+ ST+
Sbjct: 250 KTDNQCTNTPSLSTLPTDSVSSTE 273
>SB_28514| Best HMM Match : MazG (HMM E-Value=6)
Length = 137
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/88 (20%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Frame = +3
Query: 423 VDPELIFTKQEKIGKGSFGEVFKGVDNRTQQVVXXXXXXXXXXXXXXXXXXXXXMVLSQC 602
+DP + + E IG+G++GEV+K + +T ++ ++
Sbjct: 51 LDPPVDWQLVESIGEGTYGEVYKVRNVKTGEIA-AAKVIDSILEKIEEVLPELEILKKFS 109
Query: 603 DSPYVT*YYGSYL-----KGTKLWIIME 671
D P + ++G+++ + +LW++ME
Sbjct: 110 DHPNIAGFHGAFIQRDPNRQDQLWLVME 137
>SB_14132| Best HMM Match : dCMP_cyt_deam (HMM E-Value=7.6e-05)
Length = 423
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 206 VLVKVKILFMRSECLLSSVQMYLCRGNARCRDC 304
VL K + + +++CL SS Q+Y+ + CR+C
Sbjct: 324 VLTKNQQIIRKADCLTSSAQLYISK--IPCREC 354
>SB_44532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +3
Query: 441 FTKQEKIGKGSFGEVFKGVDNRT 509
F+K EKIG+G++G V+K + +T
Sbjct: 111 FSKIEKIGEGTYGVVYKAKNLKT 133
>SB_43658| Best HMM Match : Pkinase (HMM E-Value=1.49939e-42)
Length = 457
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 453 EKIGKGSFGEVFKGV 497
E IGKG +GEV+KGV
Sbjct: 199 ESIGKGRYGEVWKGV 213
>SB_38533| Best HMM Match : Pkinase (HMM E-Value=0.15)
Length = 116
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +3
Query: 441 FTKQEKIGKGSFGEVFKGVDNRT 509
F+K EKIG+G++G V+K + +T
Sbjct: 15 FSKIEKIGEGTYGVVYKAKNLKT 37
>SB_33662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 456 KIGKGSFGEVFKGVDNRTQQV 518
K+G+G FGEV++G+ N T V
Sbjct: 249 KLGQGQFGEVWEGLWNNTTPV 269
>SB_31780| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 964
Score = 27.9 bits (59), Expect = 8.6
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +3
Query: 441 FTKQEKIGKGSFGEVF---KGVDNRTQQVVXXXXXXXXXXXXXXXXXXXXXMVLSQCDSP 611
+ K +G+G++G V+ + VDN V+ VLS P
Sbjct: 4 YEKVRIVGRGAYGTVYLCRRLVDNFL--VIIKQIPVEEMTKEERQSALNEVKVLSMFQHP 61
Query: 612 YVT*YYGSYLKGTKLWIIMEY 674
+ YY S+++ L I+MEY
Sbjct: 62 NIIRYYDSFVQEKALMIVMEY 82
>SB_10837| Best HMM Match : Pkinase (HMM E-Value=1.49939e-42)
Length = 386
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 453 EKIGKGSFGEVFKGV 497
E IGKG +GEV+KGV
Sbjct: 128 ESIGKGRYGEVWKGV 142
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,897,063
Number of Sequences: 59808
Number of extensions: 385000
Number of successful extensions: 1019
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1877743452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -