Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0690
         (789 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    26   1.2  
Y17699-1|CAA76819.1|   81|Anopheles gambiae hypothetical protein...    23   8.1  

>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 23/85 (27%), Positives = 29/85 (34%)
 Frame = +2

Query: 461 PAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAV 640
           PA       T   A  A  +      AT A  +  + A           A T  + A A 
Sbjct: 182 PAVPAAPVATAALAATAFAATNAASVATAAPAAITAPAANAASTAAAPAAATAHA-ATAS 240

Query: 641 PEIKTPEAADAPKLADNPVDEDKPA 715
           P      AA AP     P+D+D PA
Sbjct: 241 PVATAALAAGAPATVSTPMDKDDPA 265


>Y17699-1|CAA76819.1|   81|Anopheles gambiae hypothetical protein
           protein.
          Length = 81

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +2

Query: 602 DLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISP 727
           + +   E + A      + EAA+ P +  +   +DKP DI P
Sbjct: 20  EASTAAEKEQATTEASDSDEAAEQPNVEKDDSPKDKP-DIDP 60


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,076
Number of Sequences: 2352
Number of extensions: 8849
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)