Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0690
(789 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g05900.1 68416.m00664 neurofilament protein-related similar t... 38 0.006
At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1 pro... 38 0.008
At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family... 36 0.040
At1g22530.1 68414.m02814 SEC14 cytosolic factor family protein /... 36 0.040
At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /... 34 0.094
At4g20260.2 68417.m02960 DREPP plasma membrane polypeptide famil... 34 0.12
At4g20260.1 68417.m02959 DREPP plasma membrane polypeptide famil... 34 0.12
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 33 0.16
At3g01700.1 68416.m00103 arabinogalactan-protein (AGP11) identic... 33 0.16
At4g29060.1 68417.m04157 elongation factor Ts family protein sim... 33 0.29
At3g49990.1 68416.m05466 expressed protein 32 0.38
At5g26200.1 68418.m03118 mitochondrial substrate carrier family ... 32 0.50
At4g31880.1 68417.m04531 expressed protein 31 0.87
At5g63550.1 68418.m07976 expressed protein 31 1.2
At1g12080.2 68414.m01397 expressed protein 31 1.2
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 30 1.5
At1g34590.1 68414.m04299 hypothetical protein 30 2.0
At5g03380.1 68418.m00291 heavy-metal-associated domain-containin... 29 2.7
At2g02790.1 68415.m00222 calmodulin-binding family protein very ... 29 2.7
At1g62480.1 68414.m07050 vacuolar calcium-binding protein-relate... 29 2.7
At3g10660.1 68416.m01282 calcium-dependent protein kinase isofor... 27 3.1
At3g43530.1 68416.m04621 hypothetical protein contains Pfam prof... 29 3.5
At3g20280.2 68416.m02570 PHD finger family protein contains Pfam... 29 3.5
At3g20280.1 68416.m02569 PHD finger family protein contains Pfam... 29 3.5
At2g45800.1 68415.m05696 LIM domain-containing protein similar t... 29 4.6
At2g43680.2 68415.m05430 calmodulin-binding family protein simil... 29 4.6
At2g43680.1 68415.m05429 calmodulin-binding family protein simil... 29 4.6
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 29 4.6
At1g76710.2 68414.m08928 SET domain-containing protein (ASHH1) l... 29 4.6
At1g76710.1 68414.m08927 SET domain-containing protein (ASHH1) l... 29 4.6
At1g12080.1 68414.m01396 expressed protein 29 4.6
At4g11860.1 68417.m01887 expressed protein contains Pfam domain ... 28 6.1
At2g22450.1 68415.m02662 riboflavin biosynthesis protein, putati... 28 6.1
At1g03100.1 68414.m00285 pentatricopeptide (PPR) repeat-containi... 28 6.1
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 28 8.1
At2g02170.1 68415.m00153 remorin family protein contains Pfam do... 28 8.1
>At3g05900.1 68416.m00664 neurofilament protein-related similar to
NF-180 (GI:632549) [Petromyzon marinus] similar to
Neurofilament triplet H protein (200 kDa neurofilament
protein) (Neurofilament heavy polypeptide) (NF-H)
(Swiss-Prot:P12036) [Homo sapiens]
Length = 673
Score = 38.3 bits (85), Expect = 0.006
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Frame = +2
Query: 422 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSA-------TDAEGSADSAAII 580
+ E + +K EE A E +K E++ + ++ EEK S T GSA + I
Sbjct: 260 ELETEVEVVKAEETAEATEQAKVELEGKLEDVIVEEKDSEINSKDEKTSESGSALCSEEI 319
Query: 581 PNMVKKIDLAPTVESDAAAVPEIKTPEAA--DAPKLADNPVDEDKPADIS 724
+ +++ + P E++ A I E A + + D P +E+KP++ S
Sbjct: 320 LSTIQESNTDPIKETEGDASYPIDVIEKAITEEKHVVDEPANEEKPSESS 369
Score = 27.9 bits (59), Expect = 8.1
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Frame = +2
Query: 434 KSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 613
K + V PA E + T+ + V E K+E+ + ++A+ A +KK P
Sbjct: 506 KETEGDVPSPADVIEKAITDEKHVVEEPLKDEQENVSEAKDVVTKLAAEDENIKKDTDTP 565
Query: 614 TVE---SDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAE 745
E + + ++ E A + P+ E K A++ AP A+
Sbjct: 566 VAEGKSEETLKETDTESVEKEAAANKQEEPITE-KVAEVVETAPVAK 611
>At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1
protein GI:1279562 from [Medicago sativa]
Length = 557
Score = 37.9 bits (84), Expect = 0.008
Identities = 28/112 (25%), Positives = 54/112 (48%)
Frame = +2
Query: 419 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 598
P A AK+ +K ++ ++ +DS +E + +K KP+A D+ S D + + +
Sbjct: 141 PAAAAKNGSVKAKKESSSEDDSSSEDEPAKKPAAKIAKPAAKDSSSSDDDS----DEDSE 196
Query: 599 IDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKS 754
+ T ++ AA + +++D +D +++KPA D KA KS
Sbjct: 197 DEKPATKKAAPAAAKAASSSDSSDED--SDEESEDEKPAQKKADT-KASKKS 245
>At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 370
Score = 35.5 bits (78), Expect = 0.040
Identities = 44/155 (28%), Positives = 61/155 (39%), Gaps = 2/155 (1%)
Frame = +2
Query: 290 EVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEA-KSADIKVEEPA 466
E+P PE K ++ P+ +I K EIP E K +I +
Sbjct: 110 ELPKFPEIPKPEL-PKMPEIPKPELPKVPEIQKPELP-KMPEIPKPELPKFPEIPKPDLP 167
Query: 467 AQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNM-VKKIDLAPTVESDAAAVP 643
PE+SK EV + E K E P + IP + K+ P +E A VP
Sbjct: 168 KFPENSKPEVPKLM-ETEKPEAPKVPE----------IPKPELPKLPEVPKLE--APKVP 214
Query: 644 EIKTPEAADAPKLADNPVDEDKPADISPDAPKAEA 748
EI+ PE P+L P + P+ PK EA
Sbjct: 215 EIQKPELPKMPELPKMPEIQKPELPKLPEVPKLEA 249
Score = 33.5 bits (73), Expect = 0.16
Identities = 40/135 (29%), Positives = 53/135 (39%)
Frame = +2
Query: 290 EVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEPAA 469
E+P +PE K + AP+ +I K E+P K +I+ E
Sbjct: 237 ELPKLPEVPKLE-APKVPEIQKPELPKMPELPKMPEIQKP-ELP----KMPEIQKPELPK 290
Query: 470 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEI 649
PE K E+ TV E+ K E P + IP V K +L E AVPEI
Sbjct: 291 VPEVPKPELP-TVPEVPKSEAPKFPEIP--KPELPKIPE-VPKPELPKVPEITKPAVPEI 346
Query: 650 KTPEAADAPKLADNP 694
PE P+L P
Sbjct: 347 PKPELPTMPQLPKLP 361
Score = 29.9 bits (64), Expect = 2.0
Identities = 33/112 (29%), Positives = 45/112 (40%)
Frame = +2
Query: 410 SEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNM 589
+E P+A K +I E PE K E V EI K E P + + I
Sbjct: 183 TEKPEAP-KVPEIPKPELPKLPEVPKLEAPK-VPEIQKPELPKMPELPKMPE---IQKPE 237
Query: 590 VKKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAE 745
+ K+ P +E A VPEI+ PE P+L P + P+ K E
Sbjct: 238 LPKLPEVPKLE--APKVPEIQKPELPKMPELPKMPEIQKPELPKMPEIQKPE 287
>At1g22530.1 68414.m02814 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus; similar to SEC14-like protein 2
(Alpha-tocopherol associated protein) (TAP) (bTAP)
(Fragment) (SP:P58875) {Bos taurus}
Length = 683
Score = 35.5 bits (78), Expect = 0.040
Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Frame = +2
Query: 419 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSA-----TDAEGSADSAAIIP 583
P E K + K EE + E+ KTE ++ AE +EEK +A T E + A I
Sbjct: 123 PVKEEKVEEKKTEETEEKKEEVKTEEKSLEAETKEEEKSAAPATVETKKEEILAAPAPIV 182
Query: 584 NMVKKID--LAPT-VESDAAA--VPEIKTPEAAD-APKLADNPVDED-KPADISPDAP 736
KK + +AP VE+ AA V E K E AP + V+E P + +P AP
Sbjct: 183 AETKKEETPVAPAPVETKPAAPVVAETKKEEILPAAPVTTETKVEEKVVPVETTPAAP 240
>At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
SEC14-like protein 2 (Alpha-tocopherol associated
protein) (TAP) (bTAP) (Fragment) (SP:P58875) {Bos
taurus}; similar to GI:807956 from [Saccharomyces
cerevisiae]; contains Pfam PF00650 : CRAL/TRIO domain;
contains Pfam PF03765 : CRAL/TRIO, N-terminus
Length = 573
Score = 34.3 bits (75), Expect = 0.094
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Frame = +2
Query: 428 EAKSADIKVEE--PAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKI 601
E + ++KVEE PA + + +A E EEKP AE + + A+
Sbjct: 145 EETTTEVKVEEEKPAVPAAEEEKSSEAAPVETKSEEKPE-EKAEVTTEKASSAEE----- 198
Query: 602 DLAPTVESDAAAVPEIKTPEAADAPKLADN-PVDEDKPAD 718
D TVE+ ++ + PE+A AP + + V E +P +
Sbjct: 199 DGTKTVEAIEESIVSVSPPESAVAPVVVETVAVAEAEPVE 238
>At4g20260.2 68417.m02960 DREPP plasma membrane polypeptide family
protein contains Pfam profile: PF05558 DREPP plasma
membrane polypeptide
Length = 225
Score = 33.9 bits (74), Expect = 0.12
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +2
Query: 413 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 592
E+ E ++K EEPA E +KTE T E KEE T +G A++
Sbjct: 133 EVKTKEIPVEEVKAEEPAKTEEPAKTE--GTSGE--KEEIVEET-KKGETPETAVVEEKK 187
Query: 593 KKIDLAPTVESDAAAVPE--IKTPEAADAPKLADNP 694
+++ + A AV E +K PE +A+ P
Sbjct: 188 PEVEEKKEEATPAPAVVETPVKEPETTTTAPVAEPP 223
>At4g20260.1 68417.m02959 DREPP plasma membrane polypeptide family
protein contains Pfam profile: PF05558 DREPP plasma
membrane polypeptide
Length = 225
Score = 33.9 bits (74), Expect = 0.12
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +2
Query: 413 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 592
E+ E ++K EEPA E +KTE T E KEE T +G A++
Sbjct: 133 EVKTKEIPVEEVKAEEPAKTEEPAKTE--GTSGE--KEEIVEET-KKGETPETAVVEEKK 187
Query: 593 KKIDLAPTVESDAAAVPE--IKTPEAADAPKLADNP 694
+++ + A AV E +K PE +A+ P
Sbjct: 188 PEVEEKKEEATPAPAVVETPVKEPETTTTAPVAEPP 223
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 33.5 bits (73), Expect = 0.16
Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 2/106 (1%)
Frame = +2
Query: 434 KSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPS-ATDAEGSADSAAIIPNMVKKIDLA 610
K K E+P +PE K E A ++ KP + + S+ P K +
Sbjct: 469 KQESPKTEQPKPKPESPKQESPKQEAPKPEQPKPKPESPKQESSKQEPPKPEESPKPEPP 528
Query: 611 PTVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADI-SPDAPKAE 745
ES P+ +TP+ ++PK + KP + P PK E
Sbjct: 529 KPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQPPKQE 574
>At3g01700.1 68416.m00103 arabinogalactan-protein (AGP11) identical
to gi|10880499|gb|AAG24279
Length = 136
Score = 33.5 bits (73), Expect = 0.16
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
Frame = +2
Query: 437 SADIKVEEPAAQPEDSKTEVQATVAEIS----KEEKPSATDAEGSADSAAIIPNMVKKID 604
+AD P A P S T+ A + S K P A + D +A P+ +
Sbjct: 20 AADAPSAAPTASPTKSPTKAPAAAPKSSAAAPKASSPVAEEPTPEDDYSAASPSDSAE-- 77
Query: 605 LAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDKP 712
APTV S A PE P ++D P +D P + P
Sbjct: 78 -APTVSSPPAPTPEADGP-SSDGPS-SDGPAAAESP 110
>At4g29060.1 68417.m04157 elongation factor Ts family protein
similar to SP|P35019 Elongation factor Ts (EF-Ts)
{Galdieria sulphuraria}; contains Pfam profiles PF00627:
UBA/TS-N domain, PF00889: Elongation factor TS, PF00575:
S1 RNA binding domain
Length = 953
Score = 32.7 bits (71), Expect = 0.29
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 25/135 (18%)
Frame = +2
Query: 419 PDAEAKSADIKVEEPAAQPED--------SKT------EVQATVAEISKEEKPSATDA-E 553
P+AEA +VEE P + S+T EV AT AE EK T+
Sbjct: 373 PEAEASVTSAEVEESVCVPAEVTSEEVPSSETPKVVEEEVIATKAEDDSPEKEEQTETLA 432
Query: 554 GSADSAAIIPNMVKKIDLAPTVESDA---AAVPEIKTPEAADAPK------LADNPVDED 706
+A++ ++P + + VE+ +A E+ +PEA + + +A+ PVDE
Sbjct: 433 AAAEAEEVVPPIPETKSEEEIVENSIPPNSATDEVSSPEALASEEVEKEQVVAETPVDEV 492
Query: 707 K-PADISPDAPKAEA 748
K PA + +A E+
Sbjct: 493 KTPAPVVTEASSEES 507
>At3g49990.1 68416.m05466 expressed protein
Length = 502
Score = 32.3 bits (70), Expect = 0.38
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = +2
Query: 416 IPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVK 595
+P A+ D+K E P A+P KT Q + E K+E+ +A AE A II K
Sbjct: 422 LPGRRAEQTDVKAEIPKAEPIKRKTHGQESKEE--KKERKNAVKAE--KREARIIKKQTK 477
Query: 596 KIDLAPTVESDAA 634
+ T + A
Sbjct: 478 MLYCGETQRAQRA 490
>At5g26200.1 68418.m03118 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 342
Score = 31.9 bits (69), Expect = 0.50
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = -1
Query: 225 LTESSILGATSRIG*AGTTSFSSATGIAKLTAAKA 121
+T+SS+ AT R+G + TTS + A G A LT+A A
Sbjct: 112 ITKSSVGQATVRLGLSDTTSLAVANGAAGLTSAVA 146
>At4g31880.1 68417.m04531 expressed protein
Length = 873
Score = 31.1 bits (67), Expect = 0.87
Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 7/111 (6%)
Frame = +2
Query: 404 KSSEIPDAEAK-SADIKVEEPAAQPEDSKTEVQATVAE---ISKEEKPSATDAEGSADSA 571
K E E K SA I EE + +P S+ +V + S + KP+ ++ S
Sbjct: 456 KKKESSTEEVKPSASIATEEVSEEPNTSEPQVTKKSGKKVASSSKTKPTVPPSKKSTSET 515
Query: 572 AIIPNMVKKIDLAPTVESDAAAVPEIKTP---EAADAPKLADNPVDEDKPA 715
+ KK+ + + E K P +A D L + D +KPA
Sbjct: 516 KVAKQSEKKVVGSDNAQESTKPKEEKKKPGRGKAIDEESLHTSSGDNEKPA 566
>At5g63550.1 68418.m07976 expressed protein
Length = 530
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +2
Query: 413 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 592
E D + + +++VE+P+ + SK V+ + K+++PS A+GSA S +
Sbjct: 320 EKTDTDDEKDEVEVEKPSKKKSSSKKTVEESSGSKGKDKQPS---AKGSARSGEKSSKQI 376
Query: 593 KKIDLAP 613
K +P
Sbjct: 377 AKSTSSP 383
>At1g12080.2 68414.m01397 expressed protein
Length = 138
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/88 (25%), Positives = 43/88 (48%)
Frame = +2
Query: 407 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPN 586
+ E+ EA+ D + E+ + +D KTEV + +EEK AE ++ A++
Sbjct: 57 NEEVVVEEAEKKDEETEKKTEE-KDEKTEVITETPVVEEEEK----KAEEVTETPAVVEE 111
Query: 587 MVKKIDLAPTVESDAAAVPEIKTPEAAD 670
KK ++ +++ AA E+ +A +
Sbjct: 112 -EKKTEVVEEKQTEVAAAEEVAVEKAEE 138
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats, Pfam:PF00560;
contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/116 (21%), Positives = 46/116 (39%)
Frame = +2
Query: 407 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPN 586
SSE S+ + P P + T VQA + P+ + + S A P
Sbjct: 696 SSEPTQVPTPSSSESYQAPNLSPVQAPTPVQAPTTSSETSQVPTPSSESNQSPSQA--PT 753
Query: 587 MVKKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKS 754
+ + APT S P + E +P+ ++ V+ +P ++P + + + S
Sbjct: 754 PILEPVHAPTPNSKPVQSP-TPSSEPVSSPEQSEE-VEAPEPTPVNPSSVPSSSPS 807
>At1g34590.1 68414.m04299 hypothetical protein
Length = 820
Score = 29.9 bits (64), Expect = 2.0
Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = +2
Query: 416 IPDAEAKSADIKVEEPAAQPEDSKT-EVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 592
IPDA A D + P A PE S+ V A S DA ++ +IP+
Sbjct: 436 IPDAAAP-VDAGLISPRAAPEASRDGNVIPDAAAPVDAGLISLRDAPEASRDGNVIPDAA 494
Query: 593 KKIDLAPTVESDAAAVPEIKTPEAADAPKLAD 688
+D AP+ +A P + EA A ++D
Sbjct: 495 APVDAAPSEAQEAE--PSVAASEAVVALPVSD 524
>At5g03380.1 68418.m00291 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP2
[GI:4097545]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 392
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +2
Query: 506 VAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLA 685
V ++ + K + G+ D + + KI P A P+ +TP ++ +
Sbjct: 51 VEDVKIDYKSNKLTVIGNVDPVEVRDKVADKIK-RPVELVSTVAPPKKETPPSSGGAEKK 109
Query: 686 DNPVDEDKPADISPDA 733
+P E+KPA+ P A
Sbjct: 110 PSPAAEEKPAEKKPAA 125
>At2g02790.1 68415.m00222 calmodulin-binding family protein very low
similarity to SP|P12036 Neurofilament triplet H protein
{Homo sapiens}; contains Pfam profile PF00612: IQ
calmodulin-binding motif
Length = 636
Score = 29.5 bits (63), Expect = 2.7
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 8/119 (6%)
Frame = +2
Query: 404 KSSEIPDAEAKSADIKVEEPAAQ----PEDSKTE-VQATVA---EISKEEKPSATDAEGS 559
K EI DA K ++ +EE + PED K + T++ ++ K+EK D +
Sbjct: 375 KKKEIADAVQK--ELPIEEVSVSLVDAPEDEKMNLIPVTISKESDLDKDEKSLVLD-KPE 431
Query: 560 ADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAP 736
D K + T E D +A +I+ P+A + + + + KP+D P
Sbjct: 432 QDELRTAERDDKAEEELKTAERDDSAEEKIQEPDAQISSENGNVASENTKPSDRRASLP 490
>At1g62480.1 68414.m07050 vacuolar calcium-binding protein-related
contains weak similarity to vacuolar calcium binding
protein [Raphanus sativus] gi|9049359|dbj|BAA99394
Length = 152
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +2
Query: 290 EVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKV-EEPA 466
E P + E KKD+ AP ++ + K E+ + + + A + V EE
Sbjct: 73 ETPEVVEIKKDEEAPVETPVV---VEDESKTEEVVEAKKEEEVEEKKTEEAPVVVEEEKK 129
Query: 467 AQPEDSKTEVQATV-AEISKEEK 532
+ E+ K V+A+V A + K ++
Sbjct: 130 PEAEEEKPAVEASVTAPVEKADE 152
>At3g10660.1 68416.m01282 calcium-dependent protein kinase isoform 2
(CPK2) identical to calcium-dependent protein kinase
isoform 2 [Arabidopsis thaliana] gi|9837343|gb|AAG00535;
contains protein kinase domain, Pfam:PF00069; contains
EF hand domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 646
Score = 27.1 bits (57), Expect(2) = 3.1
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 413 EIPDAEAKSADIKVEEPAAQPED-SKTEVQATVAEISKEEKPSATDAE 553
E+P E+K ++ V+ +A+PE S+++ + T E + E KP T AE
Sbjct: 109 EVPPEESKR-EVVVQPESAKPETKSESKPETTKPETTSETKPE-TKAE 154
Score = 20.6 bits (41), Expect(2) = 3.1
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +2
Query: 302 IPEAKKDDIAPEDS 343
+PE K ++ PE+S
Sbjct: 102 VPEESKQEVPPEES 115
>At3g43530.1 68416.m04621 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 615
Score = 29.1 bits (62), Expect = 3.5
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 10/121 (8%)
Frame = +2
Query: 422 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDA-EGS---------ADSA 571
+ E + + ++++ AQ D++ EV EI KE +D +G+ A+S
Sbjct: 441 EREVREKETEIDKEVAQG-DNEREVGEKETEIDKEVGQGDSDIFDGNKDMELNKEVAEST 499
Query: 572 AIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAK 751
+ K ++ + + A EI PE+ ++AD+ D++ P D D K
Sbjct: 500 IGVAESEKDKEVTESEKDKEVAESEIGVPESEKDIEVADSEKDKEVPQDDEMDGGKVTEP 559
Query: 752 S 754
S
Sbjct: 560 S 560
>At3g20280.2 68416.m02570 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 482
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +2
Query: 449 KVEEPAAQPEDSKTE-VQATVAEISKEEKPSATDAEG--SADSAAIIPNMVKKIDLAPTV 619
K E + P+ + + V E SK+ K + + +A A ++P+ I AP+V
Sbjct: 344 KPSESTSHPDSLNDKTISENVQESSKDAKVDSEACQNHPTASPATVVPDQDSTITAAPSV 403
Query: 620 ESDAAAVPEIKTP 658
+ +A KTP
Sbjct: 404 TQEDSAFNTEKTP 416
>At3g20280.1 68416.m02569 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 743
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +2
Query: 449 KVEEPAAQPEDSKTE-VQATVAEISKEEKPSATDAEG--SADSAAIIPNMVKKIDLAPTV 619
K E + P+ + + V E SK+ K + + +A A ++P+ I AP+V
Sbjct: 605 KPSESTSHPDSLNDKTISENVQESSKDAKVDSEACQNHPTASPATVVPDQDSTITAAPSV 664
Query: 620 ESDAAAVPEIKTP 658
+ +A KTP
Sbjct: 665 TQEDSAFNTEKTP 677
>At2g45800.1 68415.m05696 LIM domain-containing protein similar to
PGPS/D1 [Petunia x hybrida] GI:4105772, LIM domain
protein PLIM1 [Nicotiana tabacum] GI:5932418; contains
Pfam profile PF00412: LIM domain
Length = 226
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2
Query: 287 DEVPAIPEAKKDDIAPE 337
D+ +IPEAK+DD APE
Sbjct: 197 DDTASIPEAKEDDAAPE 213
>At2g43680.2 68415.m05430 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 669
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = +2
Query: 605 LAPTVESDAAAVPEIKTPEA----ADAPK-LADNPVDEDKPADISPDAP 736
L+P S A VP +P+ AD P+ L+ P D KP+ S +AP
Sbjct: 127 LSPKPPSPRAEVPRSLSPKPPSPRADLPRSLSPKPFDRSKPSSASANAP 175
>At2g43680.1 68415.m05429 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 668
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = +2
Query: 605 LAPTVESDAAAVPEIKTPEA----ADAPK-LADNPVDEDKPADISPDAP 736
L+P S A VP +P+ AD P+ L+ P D KP+ S +AP
Sbjct: 126 LSPKPPSPRAEVPRSLSPKPPSPRADLPRSLSPKPFDRSKPSSASANAP 174
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Frame = +2
Query: 401 AKSSEIPDAEAKSADIKVEEPAAQPED-------SKTEVQATVAEISKEEKPSATDAEGS 559
A E P AE ++ VEE AAQPE + E + A K++K + E
Sbjct: 308 AALGETPAAERPASSTPVEEKAAQPEPVAPVENAGEKEGEEETAAAKKKKKKKEKEKEKK 367
Query: 560 ADSAAIIPNMVK 595
A +AA + V+
Sbjct: 368 AAAAAAATSSVE 379
>At1g76710.2 68414.m08928 SET domain-containing protein (ASHH1) low
similarity to huntingtin interacting protein 1 [Homo
sapiens] GI:12697196; contains Pfam profile PF00856: SET
domain; identical to cDNA ASH1-like protein 1 (ASHH1)
partial cds GI:15488417
Length = 492
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = +2
Query: 518 SKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPV 697
+ EEK E +S A+ N+ ++ D PT + +KT + D L+ N
Sbjct: 276 TNEEKEKDISTENHLESTAL--NIQQQSDSTPTPMEEDVVTETVKTETSEDMKLLSQNSQ 333
Query: 698 DEDKP 712
++ P
Sbjct: 334 EDSSP 338
>At1g76710.1 68414.m08927 SET domain-containing protein (ASHH1) low
similarity to huntingtin interacting protein 1 [Homo
sapiens] GI:12697196; contains Pfam profile PF00856: SET
domain; identical to cDNA ASH1-like protein 1 (ASHH1)
partial cds GI:15488417
Length = 492
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = +2
Query: 518 SKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPV 697
+ EEK E +S A+ N+ ++ D PT + +KT + D L+ N
Sbjct: 276 TNEEKEKDISTENHLESTAL--NIQQQSDSTPTPMEEDVVTETVKTETSEDMKLLSQNSQ 333
Query: 698 DEDKP 712
++ P
Sbjct: 334 EDSSP 338
>At1g12080.1 68414.m01396 expressed protein
Length = 104
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/89 (24%), Positives = 42/89 (47%)
Frame = +2
Query: 404 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 583
K+ E E + D + E+ + +D KTEV + +EEK AE ++ A++
Sbjct: 22 KTVEETVVETEKKDEETEKKTEE-KDEKTEVITETPVVEEEEK----KAEEVTETPAVVE 76
Query: 584 NMVKKIDLAPTVESDAAAVPEIKTPEAAD 670
KK ++ +++ AA E+ +A +
Sbjct: 77 E-EKKTEVVEEKQTEVAAAEEVAVEKAEE 104
>At4g11860.1 68417.m01887 expressed protein contains Pfam domain
PF04424: Protein of unknown function (DUF544)
Length = 682
Score = 28.3 bits (60), Expect = 6.1
Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = +2
Query: 434 KSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 613
KS D+ ++ +++ +T SKE T +E + + + +
Sbjct: 336 KSEDLNHDQLSSKQSGGETACDVENVSSSKEAIVDVTSSEALSVDKGNLESAKSESSSES 395
Query: 614 TVESDAAAV-PEIK-TPEAADAPKLADNPVDEDKP 712
++SDAA++ P++ + DAP PV D+P
Sbjct: 396 VLKSDAASIDPDLSCRSQHDDAPNAFIPPVSTDEP 430
>At2g22450.1 68415.m02662 riboflavin biosynthesis protein, putative
similar to SP|P50855 Riboflavin biosynthesis protein
ribA [Includes: GTP cyclohydrolase II (EC 3.5.4.25);
3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP
synthase)] {Actinobacillus pleuropneumoniae}; contains
Pfam profiles PF00925: GTP cyclohydrolase II, PF00926:
3,4-dihydroxy-2-butanone 4-phosphate synthase
Length = 476
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +2
Query: 551 EGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPD 730
EG S++ I+L P + S E+ P D+P++ D D D+P D
Sbjct: 50 EGDVFSSSKSNGSSMGIELQPDLVSFGTLAAEM-IPTTMDSPEVEDEEFDLDRPTDGFAS 108
Query: 731 APKA 742
P+A
Sbjct: 109 IPQA 112
>At1g03100.1 68414.m00285 pentatricopeptide (PPR) repeat-containing
protein low similarity to CRP1 [Zea mays] GI:3289002;
contains Pfam profile PF01535: PPR repeat
Length = 793
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 423 MLKQNLLILKWKNQLLSLKIQKLKYKLPSLKFQKKKNL 536
M K+N+ + K+K ++L LK K YK + K Q + L
Sbjct: 740 MEKKNMFVDKYKYRMLFLKYHKTAYKGKAPKVQSESQL 777
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 27.9 bits (59), Expect = 8.1
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Frame = +2
Query: 401 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQ------ATVAEISKEEKPSATDAEGSA 562
A SS+ E K K EE ++Q E + E + ++ E SKEE+P + E S+
Sbjct: 322 ASSSQDESKEEKPERKKKEESSSQGEGKEEEPEKREKEDSSSQEESKEEEPENKEKEASS 381
Query: 563 DSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPE 661
N +K+ ++ ES + E K E
Sbjct: 382 SQE---ENEIKETEIKEKEESSSQEGNENKETE 411
>At2g02170.1 68415.m00153 remorin family protein contains Pfam
domain, PF03763: Remorin, C-terminal region
Length = 486
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +2
Query: 422 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSA 571
+AE K ++KVE + +D + AT+ E EEK +A +A+ +A
Sbjct: 411 EAEMKKTEVKVERIKGRAQDRLMKKLATI-ERKAEEKRAAAEAKKDHQAA 459
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,106,695
Number of Sequences: 28952
Number of extensions: 196083
Number of successful extensions: 720
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1775300800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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