Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0688
         (694 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    75   3e-15
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.56 
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   1.7  
AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8...    25   3.0  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   5.2  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    24   5.2  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   5.2  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   9.1  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   9.1  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 74.5 bits (175), Expect = 3e-15
 Identities = 34/62 (54%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
 Frame = +2

Query: 95  EEWEPEGHTHT---EHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQ 265
           +E +  GH H+   E +K   V V +K+GVP+PHPV ++VP YVKV IPQPYP+ V VEQ
Sbjct: 147 KEAQAAGHLHSSVSEKSKTVPVPVFQKVGVPVPHPVPIAVPHYVKVYIPQPYPLQVNVEQ 206

Query: 266 PI 271
           PI
Sbjct: 207 PI 208



 Score = 39.1 bits (87), Expect = 1e-04
 Identities = 19/45 (42%), Positives = 26/45 (57%)
 Frame = +2

Query: 137 KPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 271
           KP   TV K   + +  P  V V +  +VP+P+PYPV VTV + I
Sbjct: 222 KPVPYTVEKPYPIEVEKPFPVEVLKKFEVPVPKPYPVPVTVYKHI 266



 Score = 33.1 bits (72), Expect = 0.009
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = +2

Query: 131 HTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 271
           H  P  V    K+ +P P+P+ V+V Q +K+PI +  P    +E+P+
Sbjct: 180 HPVPIAVPHYVKVYIPQPYPLQVNVEQPIKIPIYKVIP--KVIEKPV 224



 Score = 30.7 bits (66), Expect = 0.046
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +2

Query: 128 EHTKPYHVTVVKKIGVPIPHPVAVSVPQY 214
           E  KP+ V V+KK  VP+P P  V V  Y
Sbjct: 235 EVEKPFPVEVLKKFEVPVPKPYPVPVTVY 263



 Score = 27.5 bits (58), Expect = 0.42
 Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
 Frame = +2

Query: 137 KPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP----QPYPVHVTVEQPI 271
           +PY + V   +  PI  P+   +P+ ++ P+P    +PYP+ V    P+
Sbjct: 196 QPYPLQV--NVEQPIKIPIYKVIPKVIEKPVPYTVEKPYPIEVEKPFPV 242



 Score = 27.1 bits (57), Expect = 0.56
 Identities = 18/42 (42%), Positives = 18/42 (42%)
 Frame = +2

Query: 128 EHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHV 253
           E   PY V     I V  P PV V     V VP P P PV V
Sbjct: 221 EKPVPYTVEKPYPIEVEKPFPVEVLKKFEVPVPKPYPVPVTV 262


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.1 bits (57), Expect = 0.56
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 188 PVAVSVPQYVKVPIPQPYPVHVTV 259
           PV + VP  + +P+P P PV + V
Sbjct: 625 PVTILVPYPIIIPLPLPIPVPIPV 648



 Score = 24.6 bits (51), Expect = 3.0
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +2

Query: 167 IGVPIPHPVAVSVPQYVKVPIP 232
           + + +P+P+ + +P  + VPIP
Sbjct: 626 VTILVPYPIIIPLPLPIPVPIP 647


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 109  RRPHAHRTHEAVPCDRGEEDRSSDSPSGGCV 201
            RR  AH T    PC + ++ + + S +GG V
Sbjct: 1037 RRKGAHTTFAPGPCQQQQQQQYAGSNAGGTV 1067



 Score = 23.0 bits (47), Expect = 9.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 214  REGAHTSTLPGP 249
            R+GAHT+  PGP
Sbjct: 1038 RKGAHTTFAPGP 1049


>AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8
           protein.
          Length = 700

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -1

Query: 145 VRLRVFCVRVAFGLPFFRRPSAGER 71
           +R RV+  R A G PF RR S G R
Sbjct: 645 LRDRVYPSRRAMGFPFDRRASNGVR 669


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = -3

Query: 215 RTAGPTQPPDGESELRSSSPRSHGTASCVLCAC 117
           R +  T  P G  EL S     HGT  C  C C
Sbjct: 630 RASNETCMPPGGGELCSG----HGTCECGTCRC 658


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 396 CPSLSPIPSMYPCTNTST 449
           CP + P P+M+P   + T
Sbjct: 345 CPDIPPAPNMWPSMTSQT 362


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 401 WAPLLFFRPQRDKAFRLHRALVFR 330
           WA +L  +  R  A R+HR L  R
Sbjct: 769 WAHVLVLKENRQLANRVHRLLAMR 792


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +3

Query: 177 RFPIRWLCRSRST*RCPYLNPTRSTSQWS 263
           + P  W  RS    R  Y+N    T+QWS
Sbjct: 162 QLPRGWEERSAQNGRTYYVNHYTKTTQWS 190


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 329 PCTVLVFQQLGGQP 288
           PC  +V QQLG QP
Sbjct: 895 PCLRIVIQQLGYQP 908


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,037
Number of Sequences: 2352
Number of extensions: 17281
Number of successful extensions: 94
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 87
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)