Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0688
         (694 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U46675-2|AAB52644.1|  125|Caenorhabditis elegans Hypothetical pr...    36   0.027
AF016448-12|AAB65959.1|  316|Caenorhabditis elegans Hypothetical...    35   0.048
L15313-8|AAA28196.1|  469|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z37983-4|CAA86057.1|  803|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U53151-2|AAN73859.1|  385|Caenorhabditis elegans Serpentine rece...    30   1.8  
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p...    29   2.4  
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p...    29   2.4  
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical p...    28   5.5  
Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical p...    28   5.5  
AC087081-8|AAY55899.1|  499|Caenorhabditis elegans Hypothetical ...    28   5.5  

>U46675-2|AAB52644.1|  125|Caenorhabditis elegans Hypothetical
           protein F35A5.5 protein.
          Length = 125

 Score = 35.9 bits (79), Expect = 0.027
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +2

Query: 167 IGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 271
           I +P P PV   VPQ V VP+P P P+ + +  P+
Sbjct: 7   IPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPV 41



 Score = 35.1 bits (77), Expect = 0.048
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 140 PYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVE 262
           P  +     +  P+P PV V +P  + +P+P P PV V V+
Sbjct: 6   PIPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPVPVQ 46



 Score = 34.7 bits (76), Expect = 0.063
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +2

Query: 167 IGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 271
           I +PIP PV V  P    VP+P P P+ + +  P+
Sbjct: 5   IPIPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPV 39



 Score = 33.9 bits (74), Expect = 0.11
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 173 VPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 271
           VP+P PV   VP  + +P+P P P+ V V  P+
Sbjct: 13  VPVPAPVPQPVPVPMPMPMPMPMPMPVPVPVPV 45



 Score = 33.5 bits (73), Expect = 0.15
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 140 PYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTV 259
           P  + +   + VP P P  V VP  + +P+P P PV V V
Sbjct: 4   PIPIPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPV 43



 Score = 32.3 bits (70), Expect = 0.34
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +2

Query: 173 VPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 271
           +P P P+ +  P  V  P+PQP PV + +  P+
Sbjct: 1   MPPPIPIPIPAPVPVPAPVPQPVPVPMPMPMPM 33


>AF016448-12|AAB65959.1|  316|Caenorhabditis elegans Hypothetical
           protein F41E6.11 protein.
          Length = 316

 Score = 35.1 bits (77), Expect = 0.048
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = +2

Query: 173 VPIPHPVAVSVPQYVKVPIPQPYPVH 250
           VP+P PV V VP  V VP+P P PV+
Sbjct: 156 VPVPVPVQVPVPIRVPVPVPVPTPVY 181



 Score = 29.9 bits (64), Expect = 1.8
 Identities = 17/46 (36%), Positives = 20/46 (43%)
 Frame = +2

Query: 122 HTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTV 259
           H     P  V V  ++ VP+P P  V  P Y  VP P P P    V
Sbjct: 155 HVPVPVPVQVPVPIRVPVPVPVPTPVYQPTYCAVP-PCPAPAATPV 199



 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
 Frame = +2

Query: 176 PIPHPVAVS-VPQYVKVPIPQ--PYPVHVTVEQPI 271
           P P PVA   V Q+V VP+P   P P+ V V  P+
Sbjct: 142 PCPAPVAPQPVIQHVPVPVPVQVPVPIRVPVPVPV 176


>L15313-8|AAA28196.1|  469|Caenorhabditis elegans Hypothetical
           protein ZK353.8 protein.
          Length = 469

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +2

Query: 164 KIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVE 262
           ++  P P P  V VP     PIP P PV   ++
Sbjct: 125 QLSTPSPSPAPVQVPASTDAPIPAPTPVTAPIQ 157


>Z37983-4|CAA86057.1|  803|Caenorhabditis elegans Hypothetical
           protein B0393.4 protein.
          Length = 803

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 149 VTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPV 247
           V V   +  P+P PV   VP+    PI +P PV
Sbjct: 108 VAVTLPVPEPVPEPVPEPVPESTPEPISEPLPV 140



 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +2

Query: 167 IGVPIPHPVAVSVPQYVKVPIPQPY--PVHVTVEQP 268
           + +P+P PV   VP+ V    P+P   P+ V  E+P
Sbjct: 110 VTLPVPEPVPEPVPEPVPESTPEPISEPLPVVQEEP 145


>U53151-2|AAN73859.1|  385|Caenorhabditis elegans Serpentine
           receptor, class r protein10 protein.
          Length = 385

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -2

Query: 189 GWGIGTPIFFTTVTWYGFVCSVCVW 115
           GWG G   FF     +GFVCS+CV+
Sbjct: 72  GWGEGN--FFGYSALFGFVCSLCVF 94


>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
            protein R11A8.7b protein.
          Length = 2584

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 176  PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 268
            P P P  V  P+ V +  P P PV + VE+P
Sbjct: 1639 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 1669


>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
            protein R11A8.7a protein.
          Length = 2606

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 176  PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 268
            P P P  V  P+ V +  P P PV + VE+P
Sbjct: 1639 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 1669


>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
           protein R11A8.7d protein.
          Length = 1427

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 176 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 268
           P P P  V  P+ V +  P P PV + VE+P
Sbjct: 460 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 490


>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
           protein R11A8.7c protein.
          Length = 1405

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 176 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 268
           P P P  V  P+ V +  P P PV + VE+P
Sbjct: 460 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 490


>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
            R11A8.7b protein.
          Length = 2584

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 176  PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 268
            P P P  V  P+ V +  P P PV + VE+P
Sbjct: 1639 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 1669


>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
            R11A8.7a protein.
          Length = 2606

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 176  PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 268
            P P P  V  P+ V +  P P PV + VE+P
Sbjct: 1639 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 1669


>Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical
           protein T12D8.9b protein.
          Length = 1183

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 98  EWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 232
           E EPE  +  E  K    ++ KK+  P P P     P  V VP+P
Sbjct: 749 EQEPESESEPEPAKKTKRSL-KKVKEPEPEPEEYEQPTPVPVPVP 792


>Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical
           protein T12D8.9a protein.
          Length = 1181

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 98  EWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 232
           E EPE  +  E  K    ++ KK+  P P P     P  V VP+P
Sbjct: 747 EQEPESESEPEPAKKTKRSL-KKVKEPEPEPEEYEQPTPVPVPVP 790


>Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical
           protein T12D8.9b protein.
          Length = 1183

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 98  EWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 232
           E EPE  +  E  K    ++ KK+  P P P     P  V VP+P
Sbjct: 749 EQEPESESEPEPAKKTKRSL-KKVKEPEPEPEEYEQPTPVPVPVP 792


>Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical
           protein T12D8.9a protein.
          Length = 1181

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 98  EWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 232
           E EPE  +  E  K    ++ KK+  P P P     P  V VP+P
Sbjct: 747 EQEPESESEPEPAKKTKRSL-KKVKEPEPEPEEYEQPTPVPVPVP 790


>AC087081-8|AAY55899.1|  499|Caenorhabditis elegans Hypothetical
           protein Y82E9BL.18 protein.
          Length = 499

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -1

Query: 298 VDNLINRYMDRLLHCDVDRVGLRYGHLHVLRDR 200
           VD L+ R + R     VDR G+R  HL++  +R
Sbjct: 22  VDRLVLRKVSRRFRIQVDRHGIRPRHLYICLNR 54


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,260,338
Number of Sequences: 27780
Number of extensions: 351800
Number of successful extensions: 1275
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)