Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0687
         (307 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   0.18 
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    23   0.54 
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   0.54 
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   2.9  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   2.9  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   3.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   3.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   6.7  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    20   6.7  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    19   8.8  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    19   8.8  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    19   8.8  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    19   8.8  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 25.0 bits (52), Expect = 0.18
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -1

Query: 106 SPRPSVATGLAPSTGKRPRSRRTWTGVVATSLVPN 2
           +P P+   G  P     PRS+R +TG  AT   PN
Sbjct: 262 APSPTAGAGGLPPQVPSPRSQRRYTG-RATCDCPN 295


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 23.4 bits (48), Expect = 0.54
 Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = -2

Query: 159 PPA*GCTLKQPDSKERPSRRDPPSLRAWHPLRE-NGPVQDELGQESSRR 16
           P   G   + P S++     DP ++  W P RE + P       +++RR
Sbjct: 92  PGTPGPLSQAPASQQSLDASDPDAMGKWCPRREWSSPPDARAASDAARR 140


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 0.54
 Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = -2

Query: 159 PPA*GCTLKQPDSKERPSRRDPPSLRAWHPLRE-NGPVQDELGQESSRR 16
           P   G   + P S++     DP ++  W P RE + P       +++RR
Sbjct: 248 PGTPGPLSQAPASQQSLDASDPDAMGKWCPRREWSSPPDARAASDAARR 296


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -1

Query: 73  PSTGKRPRSRR 41
           PS+G+ PR+RR
Sbjct: 203 PSSGRSPRTRR 213


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 267 RFHVLLNSLFKVLFNFPSRYLF 202
           R  V+L  L  +LF+ P+ +LF
Sbjct: 162 RVLVMLAWLLSILFSLPTVFLF 183


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 127 GLLESAALSGW*TPSKAKYD 186
           GL+ SAA+SG     K  YD
Sbjct: 174 GLILSAAVSGGIASCKLSYD 193


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 303 LTIGRIGYRAPPRFHVLLNSLFKVLFNF 220
           L I  +GY    +F  LL +L+ + +NF
Sbjct: 102 LDIEILGYVNKAKFGKLLINLYTINYNF 129


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +1

Query: 127  GLLESAALSGW*TPSKAKYDR 189
            G+  S AL GW      KY R
Sbjct: 1468 GIKVSLALGGWNDSQGDKYSR 1488


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 127 GLLESAALSGW*TPSKAKYD 186
           G++ SAA+SG     K  YD
Sbjct: 174 GMILSAAVSGGIASCKLSYD 193


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 235 FEERVQEYVKPWG 273
           F + V E+VK WG
Sbjct: 121 FIKSVVEFVKTWG 133


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 212 GTCSLSVSRSYL 177
           G C  S+SR YL
Sbjct: 102 GQCIYSISRDYL 113


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 212 GTCSLSVSRSYL 177
           G C  S+SR YL
Sbjct: 102 GQCIYSISRDYL 113


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 212 GTCSLSVSRSYL 177
           G C  S+SR YL
Sbjct: 102 GQCIYSISRDYL 113


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,954
Number of Sequences: 336
Number of extensions: 1180
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5518292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)