Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0687
(307 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 6e-13
SB_41016| Best HMM Match : RPEL (HMM E-Value=8.9) 67 2e-12
SB_39882| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 2e-12
SB_28599| Best HMM Match : MSSP (HMM E-Value=6.8) 67 2e-12
SB_10424| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 2e-12
SB_52707| Best HMM Match : RPEL (HMM E-Value=8.9) 67 2e-12
SB_34424| Best HMM Match : RNase_U2 (HMM E-Value=7.5) 67 2e-12
SB_30254| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 2e-12
SB_45856| Best HMM Match : DUF755 (HMM E-Value=4.7) 66 5e-12
SB_12256| Best HMM Match : TP1 (HMM E-Value=8.5) 66 7e-12
SB_18779| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 5e-10
SB_10239| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 5e-10
SB_42346| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 5e-10
SB_6264| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 5e-10
SB_22121| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 6e-10
SB_36138| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 6e-09
SB_15035| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 6e-09
SB_25175| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-08
SB_49084| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 4e-07
SB_34898| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 3e-06
SB_46955| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.007
SB_25877| Best HMM Match : TP1 (HMM E-Value=8.5) 33 0.035
SB_34518| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.046
SB_26769| Best HMM Match : Popeye (HMM E-Value=1.8) 33 0.046
SB_45983| Best HMM Match : HLH (HMM E-Value=1.3) 31 0.14
SB_45914| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.19
SB_33268| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.43
SB_6379| Best HMM Match : Proteasome (HMM E-Value=0) 29 0.57
SB_5107| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.3
SB_13309| Best HMM Match : EGF (HMM E-Value=0) 26 7.0
SB_31883| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.0
SB_38542| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.2
SB_7131| Best HMM Match : Tetraspannin (HMM E-Value=0.17) 25 9.2
SB_5196| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.2
SB_3204| Best HMM Match : FGF (HMM E-Value=0.17) 25 9.2
SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31) 25 9.2
>SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3408
Score = 69.3 bits (162), Expect = 6e-13
Identities = 32/46 (69%), Positives = 36/46 (78%)
Frame = +2
Query: 131 CLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFKST*NR 268
CL +QP GGKLHL+LN+ RPIANKYREGK+K TLKRE KS R
Sbjct: 725 CLGMQPKMGGKLHLKLNIGTRPIANKYREGKMKSTLKRELKSARQR 770
>SB_41016| Best HMM Match : RPEL (HMM E-Value=8.9)
Length = 148
Score = 67.3 bits (157), Expect = 2e-12
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = +2
Query: 131 CLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFK 253
CL +QP GGKLHL+LN+ RPIANKYREGK+K TLKRE K
Sbjct: 62 CLGMQPKMGGKLHLKLNIGTRPIANKYREGKMKSTLKRELK 102
>SB_39882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 67.3 bits (157), Expect = 2e-12
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = +2
Query: 131 CLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFK 253
CL +QP GGKLHL+LN+ RPIANKYREGK+K TLKRE K
Sbjct: 8 CLGMQPKMGGKLHLKLNIGTRPIANKYREGKMKSTLKRELK 48
>SB_28599| Best HMM Match : MSSP (HMM E-Value=6.8)
Length = 148
Score = 67.3 bits (157), Expect = 2e-12
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = +2
Query: 131 CLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFK 253
CL +QP GGKLHL+LN+ RPIANKYREGK+K TLKRE K
Sbjct: 62 CLGMQPKMGGKLHLKLNIGTRPIANKYREGKMKSTLKRELK 102
>SB_10424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 67.3 bits (157), Expect = 2e-12
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = +2
Query: 131 CLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFK 253
CL +QP GGKLHL+LN+ RPIANKYREGK+K TLKRE K
Sbjct: 36 CLGMQPKMGGKLHLKLNIGTRPIANKYREGKMKSTLKRELK 76
>SB_52707| Best HMM Match : RPEL (HMM E-Value=8.9)
Length = 147
Score = 67.3 bits (157), Expect = 2e-12
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = +2
Query: 131 CLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFK 253
CL +QP GGKLHL+LN+ RPIANKYREGK+K TLKRE K
Sbjct: 61 CLGMQPKMGGKLHLKLNIGTRPIANKYREGKMKSTLKRELK 101
>SB_34424| Best HMM Match : RNase_U2 (HMM E-Value=7.5)
Length = 206
Score = 67.3 bits (157), Expect = 2e-12
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = +2
Query: 131 CLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFK 253
CL +QP GGKLHL+LN+ RPIANKYREGK+K TLKRE K
Sbjct: 120 CLGMQPKMGGKLHLKLNIGTRPIANKYREGKMKSTLKRELK 160
>SB_30254| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 67.3 bits (157), Expect = 2e-12
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = +2
Query: 131 CLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFK 253
CL +QP GGKLHL+LN+ RPIANKYREGK+K TLKRE K
Sbjct: 19 CLGMQPKMGGKLHLKLNIGTRPIANKYREGKMKSTLKRELK 59
>SB_45856| Best HMM Match : DUF755 (HMM E-Value=4.7)
Length = 187
Score = 66.1 bits (154), Expect = 5e-12
Identities = 37/75 (49%), Positives = 41/75 (54%)
Frame = -2
Query: 234 VLFNFPSRYLFAIGLAVIFSLRWSLPPA*GCTLKQPDSKERPSRRDPPSLRAWHPLRENG 55
VLF FPSRYLFAIGL IFS RWSLPP GC KQPDS + R + P
Sbjct: 89 VLFIFPSRYLFAIGLVPIFSFRWSLPPILGCIPKQPDSSKAHRERPRSPQTGFSP--STT 146
Query: 54 PVQDELGQESSRRAS 10
+LG+ RR S
Sbjct: 147 CCSKQLGRPRIRRES 161
>SB_12256| Best HMM Match : TP1 (HMM E-Value=8.5)
Length = 156
Score = 65.7 bits (153), Expect = 7e-12
Identities = 33/46 (71%), Positives = 34/46 (73%), Gaps = 4/46 (8%)
Frame = -2
Query: 234 VLFNFPSRYLFAIGLAVIFSLRWSLPPA*GCTLKQPDS----KERP 109
VLF FPSRYLFAIGL IFS RWSLPP GC KQPDS +ERP
Sbjct: 58 VLFIFPSRYLFAIGLVPIFSFRWSLPPILGCIPKQPDSSKAHRERP 103
>SB_18779| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 59.7 bits (138), Expect = 5e-10
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +2
Query: 155 GGKLHLRLNMTARPIANKYREGKLKRTLKREFK 253
GGKLHL+LN+ RPIANKYREGK+K TLKRE K
Sbjct: 2 GGKLHLKLNIGTRPIANKYREGKMKSTLKRELK 34
>SB_10239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 59.7 bits (138), Expect = 5e-10
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +2
Query: 155 GGKLHLRLNMTARPIANKYREGKLKRTLKREFK 253
GGKLHL+LN+ RPIANKYREGK+K TLKRE K
Sbjct: 2 GGKLHLKLNIGTRPIANKYREGKMKSTLKRELK 34
>SB_42346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 59.7 bits (138), Expect = 5e-10
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +2
Query: 155 GGKLHLRLNMTARPIANKYREGKLKRTLKREFK 253
GGKLHL+LN+ RPIANKYREGK+K TLKRE K
Sbjct: 2 GGKLHLKLNIGTRPIANKYREGKMKSTLKRELK 34
>SB_6264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 59.7 bits (138), Expect = 5e-10
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +2
Query: 155 GGKLHLRLNMTARPIANKYREGKLKRTLKREFK 253
GGKLHL+LN+ RPIANKYREGK+K TLKRE K
Sbjct: 2 GGKLHLKLNIGTRPIANKYREGKMKSTLKRELK 34
>SB_22121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 59.3 bits (137), Expect = 6e-10
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +2
Query: 155 GGKLHLRLNMTARPIANKYREGKLKRTLKREFK 253
GGKLHL+LN+ RPIANKYREGK+K TLKRE K
Sbjct: 2 GGKLHLKLNIGKRPIANKYREGKMKSTLKRELK 34
>SB_36138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 56.0 bits (129), Expect = 6e-09
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = +2
Query: 155 GGKLHLRLNMTARPIANKYREGKLKRTLKREFK 253
GGKLHL+LN+ RPIANKYREGK+K TLK+ K
Sbjct: 2 GGKLHLKLNIGTRPIANKYREGKMKSTLKKRVK 34
>SB_15035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 56.0 bits (129), Expect = 6e-09
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = +2
Query: 155 GGKLHLRLNMTARPIANKYREGKLKRTLKREFK 253
GGKLHL+LN+ RPIANKYREGK+K TLK+ K
Sbjct: 2 GGKLHLKLNIGTRPIANKYREGKMKSTLKKRVK 34
>SB_25175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 54.4 bits (125), Expect = 2e-08
Identities = 23/33 (69%), Positives = 28/33 (84%)
Frame = +2
Query: 155 GGKLHLRLNMTARPIANKYREGKLKRTLKREFK 253
GGKLHL+LN+ RPIANKYREGK+K TL++ K
Sbjct: 2 GGKLHLKLNIGTRPIANKYREGKMKSTLEKRVK 34
Score = 26.2 bits (55), Expect = 5.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 217 GKVEKNFEERVQEYVKPWGG 276
GK++ E+RV++YVKP G
Sbjct: 23 GKMKSTLEKRVKKYVKPLKG 42
>SB_49084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 50.0 bits (114), Expect = 4e-07
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +2
Query: 155 GGKLHLRLNMTARPIANKYREGKLKRTL 238
GGKLHL+LN+ RPIANKYREG++K TL
Sbjct: 2 GGKLHLKLNIGTRPIANKYREGQMKSTL 29
>SB_34898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 47.2 bits (107), Expect = 3e-06
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = +2
Query: 155 GGKLHLRLNMTARPIANKYREGKLKRTLKREFK 253
GGKLHL+LN+ RPIANKYREGK ++ ++ K
Sbjct: 2 GGKLHLKLNIGTRPIANKYREGKDEKHFEKRVK 34
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 217 GKVEKNFEERVQEYVKPWGG 276
GK EK+FE+RV++YVK G
Sbjct: 23 GKDEKHFEKRVKKYVKTLKG 42
>SB_46955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 35.9 bits (79), Expect = 0.007
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = -2
Query: 207 LFAIGLAVIFSLRWSLPPA*GCTLKQPDSKERPSRRDPPSLRAWHPLRENGPVQDELGQE 28
+ I + ++ + RWSLPP GC KQPDS + +R + P +LG+
Sbjct: 23 IIIIIIILLHTRRWSLPPILGCIPKQPDSSKAHRKRPRSPQTGFSP--STTCCSKQLGRP 80
Query: 27 SSRRAS 10
RR S
Sbjct: 81 RIRRES 86
>SB_25877| Best HMM Match : TP1 (HMM E-Value=8.5)
Length = 139
Score = 33.5 bits (73), Expect = 0.035
Identities = 16/25 (64%), Positives = 17/25 (68%), Gaps = 4/25 (16%)
Frame = -2
Query: 171 RWSLPPA*GCTLKQPDS----KERP 109
RWSLPP GC KQPDS +ERP
Sbjct: 62 RWSLPPILGCIPKQPDSSKAHRERP 86
>SB_34518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 33.1 bits (72), Expect = 0.046
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -3
Query: 176 ALDGVYHPLRAALSSNPTLR 117
ALDGVYHP AA +NPT R
Sbjct: 58 ALDGVYHPFWAAFPNNPTRR 77
>SB_26769| Best HMM Match : Popeye (HMM E-Value=1.8)
Length = 411
Score = 33.1 bits (72), Expect = 0.046
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -3
Query: 176 ALDGVYHPLRAALSSNPTLR 117
ALDGVYHP AA +NPT R
Sbjct: 344 ALDGVYHPFWAAFPNNPTRR 363
>SB_45983| Best HMM Match : HLH (HMM E-Value=1.3)
Length = 68
Score = 31.5 bits (68), Expect = 0.14
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -3
Query: 173 LDGVYHPLRAALSSNPTLR 117
LDGVYHP AA +NPT R
Sbjct: 2 LDGVYHPFWAAFPNNPTRR 20
>SB_45914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 31.1 bits (67), Expect = 0.19
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -3
Query: 176 ALDGVYHPLRAALSSNPTLR 117
ALDG YHP AA +NPT R
Sbjct: 58 ALDGFYHPFWAAFPNNPTRR 77
>SB_33268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 29.9 bits (64), Expect = 0.43
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +2
Query: 212 REGKLKRTLKREFKST*NRGGAR-YPIRP 295
+EGK KRTL+REF S+ G + Y I+P
Sbjct: 40 QEGKSKRTLEREFSSSFGSGATQIYIIKP 68
>SB_6379| Best HMM Match : Proteasome (HMM E-Value=0)
Length = 909
Score = 29.5 bits (63), Expect = 0.57
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = -3
Query: 206 CSLSVSRSYLALDGVYHPLRAALSSNPTLRSVPLAATLRRYGPGTLYGKTAPFKTNL 36
C L S D + + +R+A ++ P LR P AA L R+G G T P + +L
Sbjct: 765 CKLFPSAPLGVADPLPYTIRSAGATQPGLRLRPYAADLARHGEGA--ALTEPLEVHL 819
>SB_5107| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 27.5 bits (58), Expect = 2.3
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1
Query: 169 MEFTTRLGLHSQAT 128
MEFTT GLHSQ T
Sbjct: 1 MEFTTHFGLHSQTT 14
>SB_13309| Best HMM Match : EGF (HMM E-Value=0)
Length = 718
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 75 HPLRENGPVQDELGQESSRRASCR 4
+P G D+LGQ+S R CR
Sbjct: 348 NPCENGGKCADDLGQDSGYRCVCR 371
>SB_31883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 57 RFPVEGARPVATEGRGERDAP 119
R PV G R + T+G G+ AP
Sbjct: 27 RLPVRGVRHLGTDGHGDYRAP 47
>SB_38542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 606
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 117 ERPSRRDPPSLRAWHPLRENG 55
+R + PP LR+W P E G
Sbjct: 114 QRKGKEQPPILRSWTPHTEEG 134
>SB_7131| Best HMM Match : Tetraspannin (HMM E-Value=0.17)
Length = 173
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 100 RPSVATGLAPSTGKRPRSRRTWTGVV 23
RP +A GL S G+ R+R+T T V
Sbjct: 148 RPGLADGLDDSDGEEDRTRKTRTVAV 173
>SB_5196| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 412
Score = 25.4 bits (53), Expect = 9.2
Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Frame = -2
Query: 300 TIGRIGYRAPPRFHVL--LNSLFKVLFNFPSRYLFAIGLAVIFSLRWSLPPA*GCTLKQP 127
+I R Y +P F L L F+ + P + + L +F LPP + P
Sbjct: 198 SISRPAYSSPLVFRGLPQLPQYFEACHSSPQYFEACLQLPPVFRGLPQLPPVFRGLPQLP 257
Query: 126 DSKERPSRRDPPSLRAWH 73
S RP+ P A H
Sbjct: 258 PSISRPANSSPQYFEACH 275
>SB_3204| Best HMM Match : FGF (HMM E-Value=0.17)
Length = 249
Score = 25.4 bits (53), Expect = 9.2
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 158 GKLHLRLNMTARPIANKYREGKLKRTLKREFKS--T*NRGGARYPIRP 295
GK+++RLN + R GK+ L R K NR G Y +RP
Sbjct: 143 GKMYIRLNRHGKMYVRPNRHGKMYFRLNRHGKMYVRLNRHGKMY-VRP 189
>SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31)
Length = 892
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2
Query: 135 KQPDSKERPSRRDPPSLRAWHPLRE 61
K+ + P RR P RAW LRE
Sbjct: 67 KEAQTDPLPKRRGNPVTRAWRRLRE 91
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,418,932
Number of Sequences: 59808
Number of extensions: 176697
Number of successful extensions: 540
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 16,821,457
effective HSP length: 71
effective length of database: 12,575,089
effective search space used: 377252670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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