Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0687
         (307 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY437926-1|AAR24077.1|  924|Drosophila melanogaster AMO protein.       28   2.6  
AY283154-1|AAQ18122.1|  924|Drosophila melanogaster polycystin-2...    28   2.6  
AE014134-2193|AAF53183.2|  924|Drosophila melanogaster CG6504-PA...    28   2.6  
M20936-1|AAA28984.1|  168|Drosophila melanogaster protein ( D.me...    27   4.5  
Z22959-1|CAA80535.1|  307|Drosophila melanogaster homeodomain-co...    27   6.0  
BT025203-1|ABF17894.1|  339|Drosophila melanogaster FI01111p pro...    27   6.0  
BT022127-1|AAY51522.1|  339|Drosophila melanogaster IP08859p pro...    27   6.0  
AE014297-3013|AAF55898.2|  339|Drosophila melanogaster CG7937-PA...    27   6.0  

>AY437926-1|AAR24077.1|  924|Drosophila melanogaster AMO protein.
          Length = 924

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -2

Query: 141 TLKQPDSKERPSRRDPPSLRAWHPLRENGPVQDELGQESSRRA 13
           T  +P + ++PS  D PS  A   +RE GP        S+R +
Sbjct: 107 TSDKPSTSDKPSTSDKPSTSARTTVREPGPSSSPSRPVSTRES 149


>AY283154-1|AAQ18122.1|  924|Drosophila melanogaster polycystin-2
           protein.
          Length = 924

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -2

Query: 141 TLKQPDSKERPSRRDPPSLRAWHPLRENGPVQDELGQESSRRA 13
           T  +P + ++PS  D PS  A   +RE GP        S+R +
Sbjct: 107 TSDKPSTSDKPSTSDKPSTSARTTVREPGPSSSPSRPVSTRES 149


>AE014134-2193|AAF53183.2|  924|Drosophila melanogaster CG6504-PA
           protein.
          Length = 924

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -2

Query: 141 TLKQPDSKERPSRRDPPSLRAWHPLRENGPVQDELGQESSRRA 13
           T  +P + ++PS  D PS  A   +RE GP        S+R +
Sbjct: 107 TSDKPSTSDKPSTSDKPSTSARTTVREPGPSSSPSRPVSTRES 149


>M20936-1|AAA28984.1|  168|Drosophila melanogaster protein (
           D.melanogaster TU-4mRNA encoding vitelline membrane
           protein, complete cds.).
          Length = 168

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -3

Query: 155 PLRAALSSNPTLRSVPLAATLRRYGPGTLYGKTAP 51
           P     S  P+L+ VPL+A  + YG    Y +  P
Sbjct: 124 PKNYLFSCQPSLQPVPLSAPAQSYGSAGAYSQYVP 158


>Z22959-1|CAA80535.1|  307|Drosophila melanogaster
           homeodomain-containing protein protein.
          Length = 307

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 6/66 (9%)
 Frame = -2

Query: 231 LFNFPSRYLFAIGLAVI------FSLRWSLPPA*GCTLKQPDSKERPSRRDPPSLRAWHP 70
           L+++P  Y  A G  V+        L W+LPP     L     K+R +   P + R  HP
Sbjct: 117 LYSYPHLYPSAAGGHVLRVPPQRTPLTWALPPLHHAALAHQAVKDRLAAAFPIARRIGHP 176

Query: 69  LRENGP 52
            +   P
Sbjct: 177 YQNRTP 182


>BT025203-1|ABF17894.1|  339|Drosophila melanogaster FI01111p
           protein.
          Length = 339

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 6/66 (9%)
 Frame = -2

Query: 231 LFNFPSRYLFAIGLAVI------FSLRWSLPPA*GCTLKQPDSKERPSRRDPPSLRAWHP 70
           L+++P  Y  A G  V+        L W+LPP     L     K+R +   P + R  HP
Sbjct: 149 LYSYPHLYPSAAGGHVLRVPPQRTPLTWALPPLHHAALAHQAVKDRLAAAFPIARRIGHP 208

Query: 69  LRENGP 52
            +   P
Sbjct: 209 YQNRTP 214


>BT022127-1|AAY51522.1|  339|Drosophila melanogaster IP08859p
           protein.
          Length = 339

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 6/66 (9%)
 Frame = -2

Query: 231 LFNFPSRYLFAIGLAVI------FSLRWSLPPA*GCTLKQPDSKERPSRRDPPSLRAWHP 70
           L+++P  Y  A G  V+        L W+LPP     L     K+R +   P + R  HP
Sbjct: 149 LYSYPHLYPSAAGGHVLRVPPQRTPLTWALPPLHHAALAHQAVKDRLAAAFPIARRIGHP 208

Query: 69  LRENGP 52
            +   P
Sbjct: 209 YQNRTP 214


>AE014297-3013|AAF55898.2|  339|Drosophila melanogaster CG7937-PA
           protein.
          Length = 339

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 6/66 (9%)
 Frame = -2

Query: 231 LFNFPSRYLFAIGLAVI------FSLRWSLPPA*GCTLKQPDSKERPSRRDPPSLRAWHP 70
           L+++P  Y  A G  V+        L W+LPP     L     K+R +   P + R  HP
Sbjct: 149 LYSYPHLYPSAAGGHVLRVPPQRTPLTWALPPLHHAALAHQAVKDRLAAAFPIARRIGHP 208

Query: 69  LRENGP 52
            +   P
Sbjct: 209 YQNRTP 214


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,748,732
Number of Sequences: 53049
Number of extensions: 248365
Number of successful extensions: 810
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 568694034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)