Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0687
(307 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70037-3|CAC42352.1| 902|Caenorhabditis elegans Hypothetical pr... 27 2.6
Z70037-2|CAA93879.2| 906|Caenorhabditis elegans Hypothetical pr... 27 2.6
D84668-1|BAA86913.1| 902|Caenorhabditis elegans CLH-1 protein. 27 2.6
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 27 2.6
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 2.6
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 2.6
AF173170-1|AAF13163.1| 868|Caenorhabditis elegans CLC chloride ... 27 2.6
Z49968-12|CAA90264.1| 880|Caenorhabditis elegans Hypothetical p... 27 3.4
Z49966-8|CAA90246.1| 880|Caenorhabditis elegans Hypothetical pr... 27 3.4
U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated p... 27 3.4
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 27 3.4
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 27 3.4
U25119-1|AAA85728.1| 1053|Caenorhabditis elegans Unc-2 protein. 27 3.4
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 27 3.4
Z75710-1|CAB00023.1| 327|Caenorhabditis elegans Hypothetical pr... 26 4.5
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 26 4.5
AY954523-1|AAX34431.1| 729|Caenorhabditis elegans anion transpo... 26 4.5
AY887907-1|AAX34419.1| 729|Caenorhabditis elegans anion transpo... 26 4.5
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 26 4.5
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 26 4.5
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 26 4.5
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 26 4.5
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 26 4.5
AC006625-1|AAK68277.2| 729|Caenorhabditis elegans Sulfate perme... 26 4.5
U40029-15|ABD94114.1| 1824|Caenorhabditis elegans Hypothetical p... 26 6.0
U40029-14|ABD94112.1| 2025|Caenorhabditis elegans Hypothetical p... 26 6.0
U40029-13|ABD94113.1| 1884|Caenorhabditis elegans Hypothetical p... 26 6.0
AC006729-4|AAK84600.1| 265|Caenorhabditis elegans Ribosomal pro... 26 6.0
AC006729-3|AAM15612.1| 245|Caenorhabditis elegans Ribosomal pro... 26 6.0
U41031-4|AAA82621.3| 482|Caenorhabditis elegans Hypothetical pr... 25 7.9
AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical ... 25 7.9
>Z70037-3|CAC42352.1| 902|Caenorhabditis elegans Hypothetical
protein T27D12.2b protein.
Length = 902
Score = 27.1 bits (57), Expect = 2.6
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -3
Query: 182 YLALDGVYHPLRAALSSNPTLRSVPLAATLRRYGPGTLYGKTA 54
Y+ + Y LR L +PTLRS P R TL G A
Sbjct: 630 YITRETTYRELREMLLESPTLRSYPFVTDSRSM---TLLGSVA 669
>Z70037-2|CAA93879.2| 906|Caenorhabditis elegans Hypothetical
protein T27D12.2a protein.
Length = 906
Score = 27.1 bits (57), Expect = 2.6
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -3
Query: 182 YLALDGVYHPLRAALSSNPTLRSVPLAATLRRYGPGTLYGKTA 54
Y+ + Y LR L +PTLRS P R TL G A
Sbjct: 630 YITRETTYRELREMLLESPTLRSYPFVTDSRSM---TLLGSVA 669
>D84668-1|BAA86913.1| 902|Caenorhabditis elegans CLH-1 protein.
Length = 902
Score = 27.1 bits (57), Expect = 2.6
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -3
Query: 182 YLALDGVYHPLRAALSSNPTLRSVPLAATLRRYGPGTLYGKTA 54
Y+ + Y LR L +PTLRS P R TL G A
Sbjct: 630 YITRETTYRELREMLLESPTLRSYPFVTDSRSM---TLLGSVA 669
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3
Query: 131 NPTLRSVPLAATLRRYGPGTLYGKTAPFKTNLDRSRRDEPRAE 3
N L SVP ++L P TL A K++L + DE E
Sbjct: 2586 NVELHSVPSLSSLVEVNPNTLMQTLASEKSSLKAAEEDEKEGE 2628
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3
Query: 131 NPTLRSVPLAATLRRYGPGTLYGKTAPFKTNLDRSRRDEPRAE 3
N L SVP ++L P TL A K++L + DE E
Sbjct: 2586 NVELHSVPSLSSLVEVNPNTLMQTLASEKSSLKAAEEDEKEGE 2628
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3
Query: 131 NPTLRSVPLAATLRRYGPGTLYGKTAPFKTNLDRSRRDEPRAE 3
N L SVP ++L P TL A K++L + DE E
Sbjct: 2586 NVELHSVPSLSSLVEVNPNTLMQTLASEKSSLKAAEEDEKEGE 2628
>AF173170-1|AAF13163.1| 868|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 868
Score = 27.1 bits (57), Expect = 2.6
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -3
Query: 182 YLALDGVYHPLRAALSSNPTLRSVPLAATLRRYGPGTLYGKTA 54
Y+ + Y LR L +PTLRS P R TL G A
Sbjct: 592 YITRETTYRELREMLLESPTLRSYPFVTDSRSM---TLLGSVA 631
>Z49968-12|CAA90264.1| 880|Caenorhabditis elegans Hypothetical
protein M110.7 protein.
Length = 880
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 163 TPSKAKYDRETDSEQVP*GKVEKNFEERVQEYVKP 267
TP K + E S+Q P E N +E+V ++KP
Sbjct: 2 TPDKKRDSSEKISKQPPRELFEPNEQEQVPSHIKP 36
>Z49966-8|CAA90246.1| 880|Caenorhabditis elegans Hypothetical
protein M110.7 protein.
Length = 880
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 163 TPSKAKYDRETDSEQVP*GKVEKNFEERVQEYVKP 267
TP K + E S+Q P E N +E+V ++KP
Sbjct: 2 TPDKKRDSSEKISKQPPRELFEPNEQEQVPSHIKP 36
>U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated
protein 2, isoform a protein.
Length = 1538
Score = 26.6 bits (56), Expect = 3.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 232 NFEERVQEYVKPWGGPVPNSPYS 300
+ +E +E P+GGP P PYS
Sbjct: 691 DLDEECEEEESPFGGPKPMVPYS 713
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 26.6 bits (56), Expect = 3.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 232 NFEERVQEYVKPWGGPVPNSPYS 300
+ +E +E P+GGP P PYS
Sbjct: 691 DLDEECEEEESPFGGPKPMVPYS 713
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 26.6 bits (56), Expect = 3.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 232 NFEERVQEYVKPWGGPVPNSPYS 300
+ +E +E P+GGP P PYS
Sbjct: 810 DLDEECEEEESPFGGPKPMVPYS 832
>U25119-1|AAA85728.1| 1053|Caenorhabditis elegans Unc-2 protein.
Length = 1053
Score = 26.6 bits (56), Expect = 3.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 232 NFEERVQEYVKPWGGPVPNSPYS 300
+ +E +E P+GGP P PYS
Sbjct: 297 DLDEECEEEESPFGGPKPMVPYS 319
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 26.6 bits (56), Expect = 3.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 232 NFEERVQEYVKPWGGPVPNSPYS 300
+ +E +E P+GGP P PYS
Sbjct: 810 DLDEECEEEESPFGGPKPMVPYS 832
>Z75710-1|CAB00023.1| 327|Caenorhabditis elegans Hypothetical
protein D1081.2 protein.
Length = 327
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 118 GASLSPRPSVATGLAPSTGKRPRSR 44
G S +P PS +TGL P+ GK+ + R
Sbjct: 24 GTSSTPTPSSSTGLLPN-GKKTKGR 47
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = -3
Query: 218 PHGTCSLSVSRSYLALDGVY 159
P G+CSL+V+ S ++ +G+Y
Sbjct: 5539 PDGSCSLTVNESTMSDEGIY 5558
>AY954523-1|AAX34431.1| 729|Caenorhabditis elegans anion
transporter SULP-1b protein.
Length = 729
Score = 26.2 bits (55), Expect = 4.5
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = -2
Query: 306 RLTIGRIGYRAPPRFHVLLNSLFKVLFNFP---SRYLFAIGLAVIFSLRWSLP 157
R I +IG+ AP F VLL + F P S+ I L++ W+LP
Sbjct: 269 RFLISKIGFSAPHEFFVLLTVTLIIFFFQPDVASQASSRIDLSIPKIGLWTLP 321
>AY887907-1|AAX34419.1| 729|Caenorhabditis elegans anion
transporter SULP-1a protein.
Length = 729
Score = 26.2 bits (55), Expect = 4.5
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = -2
Query: 306 RLTIGRIGYRAPPRFHVLLNSLFKVLFNFP---SRYLFAIGLAVIFSLRWSLP 157
R I +IG+ AP F VLL + F P S+ I L++ W+LP
Sbjct: 269 RFLISKIGFSAPHEFFVLLTVTLIIFFFQPDVASQASSRIDLSIPKIGLWTLP 321
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = -3
Query: 218 PHGTCSLSVSRSYLALDGVY 159
P G+CSL+V+ S ++ +G+Y
Sbjct: 4899 PDGSCSLTVNESTMSDEGIY 4918
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = -3
Query: 218 PHGTCSLSVSRSYLALDGVY 159
P G+CSL+V+ S ++ +G+Y
Sbjct: 5539 PDGSCSLTVNESTMSDEGIY 5558
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = -3
Query: 218 PHGTCSLSVSRSYLALDGVY 159
P G+CSL+V+ S ++ +G+Y
Sbjct: 5539 PDGSCSLTVNESTMSDEGIY 5558
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = -3
Query: 218 PHGTCSLSVSRSYLALDGVY 159
P G+CSL+V+ S ++ +G+Y
Sbjct: 4899 PDGSCSLTVNESTMSDEGIY 4918
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = -3
Query: 218 PHGTCSLSVSRSYLALDGVY 159
P G+CSL+V+ S ++ +G+Y
Sbjct: 5539 PDGSCSLTVNESTMSDEGIY 5558
>AC006625-1|AAK68277.2| 729|Caenorhabditis elegans Sulfate permease
family protein 1 protein.
Length = 729
Score = 26.2 bits (55), Expect = 4.5
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = -2
Query: 306 RLTIGRIGYRAPPRFHVLLNSLFKVLFNFP---SRYLFAIGLAVIFSLRWSLP 157
R I +IG+ AP F VLL + F P S+ I L++ W+LP
Sbjct: 269 RFLISKIGFSAPHEFFVLLTVTLIIFFFQPDVASQASSRIDLSIPKIGLWTLP 321
>U40029-15|ABD94114.1| 1824|Caenorhabditis elegans Hypothetical
protein F10G7.10c protein.
Length = 1824
Score = 25.8 bits (54), Expect = 6.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 194 PIANKYREGKLKRTLKREFKST*NRGGARYPIRPI 298
P+A + EGKLKR R K + N+ + P+ P+
Sbjct: 1218 PVARQIIEGKLKREELRISKHSRNQEKMKAPMDPV 1252
>U40029-14|ABD94112.1| 2025|Caenorhabditis elegans Hypothetical
protein F10G7.10a protein.
Length = 2025
Score = 25.8 bits (54), Expect = 6.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 194 PIANKYREGKLKRTLKREFKST*NRGGARYPIRPI 298
P+A + EGKLKR R K + N+ + P+ P+
Sbjct: 1218 PVARQIIEGKLKREELRISKHSRNQEKMKAPMDPV 1252
>U40029-13|ABD94113.1| 1884|Caenorhabditis elegans Hypothetical
protein F10G7.10b protein.
Length = 1884
Score = 25.8 bits (54), Expect = 6.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 194 PIANKYREGKLKRTLKREFKST*NRGGARYPIRPI 298
P+A + EGKLKR R K + N+ + P+ P+
Sbjct: 1218 PVARQIIEGKLKREELRISKHSRNQEKMKAPMDPV 1252
>AC006729-4|AAK84600.1| 265|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 7A, isoform a protein.
Length = 265
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 223 VEKNFEERVQEYVKPWGGPV 282
V NF ER +E K WGG V
Sbjct: 223 VNNNFSERHEEIRKHWGGGV 242
>AC006729-3|AAM15612.1| 245|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 7A, isoform c protein.
Length = 245
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 223 VEKNFEERVQEYVKPWGGPV 282
V NF ER +E K WGG V
Sbjct: 203 VNNNFSERHEEIRKHWGGGV 222
>U41031-4|AAA82621.3| 482|Caenorhabditis elegans Hypothetical
protein C16B8.4 protein.
Length = 482
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -3
Query: 197 SVSRSYLALDGVYHPLRAALSSNPTLRSVPLAATLRRYGPGTLYGK 60
S+ S+L D Y +ALSS+ + P++ + +YGK
Sbjct: 284 SILLSHLEFDSSYAVTFSALSSDQNTATTPISVRFNSFQCKQVYGK 329
>AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical
protein Y34B4A.8 protein.
Length = 604
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -2
Query: 180 FSLRWSLPPA*GCTLKQPDSKERPSRRDPPSLRA 79
FS S P G +L + ++ RP+R PPS RA
Sbjct: 483 FSDDQSPSPFNGGSLTRSHTEHRPNRPPPPSFRA 516
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,649,003
Number of Sequences: 27780
Number of extensions: 118074
Number of successful extensions: 417
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 417
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 323034540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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