SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0686
         (540 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0779 - 28023735-28024058,28024520-28024618,28024704-280249...    32   0.34 
06_03_1295 + 29100322-29100391,29100774-29100781,29101571-291016...    31   0.44 
07_03_0332 + 16880184-16881017,16881334-16881462,16882685-168827...    31   0.59 
04_03_0890 + 20576843-20578119,20578563-20578806,20578890-20580002     30   1.0  
11_02_0133 + 8661030-8661141,8661727-8662031,8662158-8662331,866...    30   1.4  
10_04_0022 + 7687383-7687670,7688479-7688556,7689456-7689535,768...    30   1.4  
08_02_0473 + 17586507-17587004,17587146-17588145,17588314-175885...    30   1.4  
08_01_0941 - 9301603-9301788,9301866-9301958,9302060-9302120,930...    30   1.4  
05_07_0257 + 28719980-28720220,28721412-28721455,28722521-287225...    30   1.4  
03_05_0791 + 27736978-27737217,27737648-27739191,27739512-277397...    30   1.4  
02_03_0365 - 18198669-18198809,18198887-18198979,18199078-181991...    30   1.4  
12_02_0240 - 16174724-16174927,16175005-16175097,16175199-161752...    29   1.8  
12_01_0919 - 9086879-9087064,9087842-9087923,9088357-9089553,908...    29   1.8  
09_01_0027 - 469856-470773,470780-471261,471296-471408,471453-47...    29   1.8  
08_02_0236 + 14652034-14652225,14652311-14652527,14652561-146532...    29   1.8  
08_01_1064 + 10841095-10842326,10842412-10842663,10842942-108430...    29   1.8  
07_03_0316 + 16684100-16684339,16684425-16685132,16685241-166859...    29   1.8  
06_02_0050 - 10951725-10951910,10951988-10952021,10952521-109527...    29   1.8  
05_03_0470 + 14448243-14448482,14448568-14449181,14449508-144501...    29   1.8  
03_05_0594 + 25981587-25981826,25981912-25982160,25982257-259838...    29   1.8  
02_02_0129 + 7055896-7056135,7056404-7056771,7056816-7056928,705...    29   1.8  
01_02_0106 - 11175200-11175385,11175463-11175496,11175987-111762...    29   1.8  
05_03_0033 - 7585267-7586028                                           29   2.4  
11_04_0240 - 15246357-15246935,15247100-15247561                       28   4.1  
03_05_0190 - 21770610-21770641,21770741-21770811,21771058-217711...    28   4.1  
01_03_0230 - 14004159-14004344,14004422-14004514,14004613-140046...    28   4.1  
01_05_0137 + 18492866-18493105,18493191-18493481,18494006-184942...    27   7.2  
11_01_0678 - 5534879-5534883,5535430-5535529,5535638-5535799,553...    27   9.6  
08_01_0985 - 9960064-9960249,9960327-9960419,9960518-9960578,996...    27   9.6  
06_03_0923 - 25972063-25972840,25973549-25973620,25973711-259737...    27   9.6  
06_03_0625 + 22854341-22854431,22854527-22854777                       27   9.6  
05_07_0294 - 29038259-29038420,29038526-29038632,29038889-290390...    27   9.6  
03_02_0915 + 12360079-12360095,12360225-12361353                       27   9.6  
01_03_0167 - 13379143-13379988                                         27   9.6  
01_03_0093 - 12422558-12422607,12422679-12422935,12423565-124239...    27   9.6  

>04_04_0779 -
           28023735-28024058,28024520-28024618,28024704-28024940,
           28025227-28025334,28025427-28025486,28025813-28025888,
           28025984-28026144,28026374-28026436,28026543-28026630,
           28026872-28027612,28027695-28028239
          Length = 833

 Score = 31.9 bits (69), Expect = 0.34
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
 Frame = +1

Query: 94  NSVSVACATPTTAKPRASADGISK-----APRPLSNILPSGGIRPNSNVSTQTXXXXXXX 258
           +SV  +C + T ++P + +  +S+     A RP ++ LP  G+RP     T +       
Sbjct: 50  SSVEKSCRSTTVSRPTSPSKEVSRCQSFSADRPHAHPLPIPGVRP-PVTRTVSDITESKP 108

Query: 259 XXKQRGKPGVRSPAP 303
             ++RGKP +  P P
Sbjct: 109 ILEKRGKPPLLLPLP 123


>06_03_1295 +
           29100322-29100391,29100774-29100781,29101571-29101676,
           29101994-29102264,29102331-29103188,29103280-29103388
          Length = 473

 Score = 31.5 bits (68), Expect = 0.44
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
 Frame = +3

Query: 18  IHKGNSTGRAPLHVHTALAAEHCPPQQRE-------RSVCDAYYSKAACFCRWDFEGSSS 176
           IH+G   G  P  V  ALA +H P    E       RSV    +SK +  C ++  G +S
Sbjct: 256 IHQGYFIGNPPFDVTIALARQHPPKLGEEAITAIWLRSVKIGGWSKGSVRCDYEHSGLNS 315

Query: 177 VIEHPA-LWW 203
           +  H   L+W
Sbjct: 316 LTIHQGMLFW 325


>07_03_0332 +
           16880184-16881017,16881334-16881462,16882685-16882750,
           16883159-16883224,16884419-16884457,16884858-16885028
          Length = 434

 Score = 31.1 bits (67), Expect = 0.59
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +1

Query: 70  SPQNTVHHNSVSVACATPTTAKPRASADGISKAPRPLSNILPSGG 204
           +P N  HH   + AC  P  A   A+A G     +  S+ L SGG
Sbjct: 120 APPNHGHHVGGAAACDNPAVAAAMAAAHGGGNVKQSGSSFLDSGG 164


>04_03_0890 + 20576843-20578119,20578563-20578806,20578890-20580002
          Length = 877

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -3

Query: 118 SHTLRSRCCGGQCSAAS 68
           SH L SRCCGG CSAA+
Sbjct: 458 SHLL-SRCCGGDCSAAT 473


>11_02_0133 +
           8661030-8661141,8661727-8662031,8662158-8662331,
           8662469-8662783,8662886-8663456,8663474-8663786,
           8663870-8663968,8664202-8664315,8664403-8664463,
           8664565-8664657,8664742-8664927
          Length = 780

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +1

Query: 88  HHNSVSVACATPTTAKPRASADGISKAPRP 177
           H N +S    T  T KP     G+ K PRP
Sbjct: 339 HKNDISFELGTDATQKPMVPKPGLGKPPRP 368


>10_04_0022 +
           7687383-7687670,7688479-7688556,7689456-7689535,
           7689876-7690095,7690444-7690677
          Length = 299

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 19/48 (39%), Positives = 25/48 (52%)
 Frame = -2

Query: 155 PSAEARGFAVVGVAHATLTLLWWTVFCGECCMNMEGGASG*VPLMNIG 12
           PSA ARG   V V H  +T LW            +G A+G +P+M+IG
Sbjct: 86  PSATARGSQAVAVRHGCVTDLW------------QGNATGNLPVMHIG 121


>08_02_0473 +
           17586507-17587004,17587146-17588145,17588314-17588566,
           17588647-17588757,17588845-17588905,17588994-17589086,
           17589164-17589349
          Length = 733

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +1

Query: 88  HHNSVSVACATPTTAKPRASADGISKAPRP 177
           H N +S    T  T KP     G++K PRP
Sbjct: 267 HKNDISFGLGTDATRKPVVPKPGLAKPPRP 296


>08_01_0941 -
           9301603-9301788,9301866-9301958,9302060-9302120,
           9302397-9302648,9302903-9303720,9303993-9304490
          Length = 635

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +1

Query: 88  HHNSVSVACATPTTAKPRASADGISKAPRP 177
           H N +S    T  T KP     G+ K PRP
Sbjct: 226 HKNDISFGLGTDATRKPLVPKPGLGKPPRP 255


>05_07_0257 +
           28719980-28720220,28721412-28721455,28722521-28722590,
           28722693-28722816,28723420-28724060,28725100-28725364,
           28725434-28725713,28726042-28726209,28726867-28727358,
           28727432-28727689
          Length = 860

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +1

Query: 73  PQNTVHHNSVSVACATPTTAKPRASADGISKAPRPLSNILP 195
           P NT+++N  +   ATP+  +P +SA    +  R L NI P
Sbjct: 510 PNNTMYNNLSTSDYATPSAVQPDSSAHIYLQEHRQLQNISP 550


>03_05_0791 +
           27736978-27737217,27737648-27739191,27739512-27739763,
           27739844-27739954,27740042-27740102,27740373-27740558
          Length = 797

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +1

Query: 88  HHNSVSVACATPTTAKPRASADGISKAPRP 177
           H N +S    T  T KP     G+ K PRP
Sbjct: 410 HKNDISFGLGTDATQKPVVDKPGLGKPPRP 439


>02_03_0365 -
           18198669-18198809,18198887-18198979,18199078-18199138,
           18199291-18199336,18199417-18199682,18199766-18200744,
           18201012-18201564,18201661-18201909,18201995-18202234
          Length = 875

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = +1

Query: 88  HHNSVSVACATPTTAKPRASADGISKAPRP 177
           H N VS    T  T KP     G+ K PRP
Sbjct: 404 HKNDVSFGLGTDATEKPVVPKPGLGKPPRP 433


>12_02_0240 -
           16174724-16174927,16175005-16175097,16175199-16175258,
           16175708-16175789,16175873-16176075,16176222-16177226,
           16177371-16177643
          Length = 639

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +1

Query: 88  HHNSVSVACATPTTAKPRASADGISKAPRP 177
           H N +S    T  T KP     G+ K PRP
Sbjct: 265 HKNDISFGLGTDATQKPVVPKPGLGKPPRP 294


>12_01_0919 -
           9086879-9087064,9087842-9087923,9088357-9089553,
           9089598-9089961,9090086-9090188,9090234-9090479
          Length = 725

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +1

Query: 88  HHNSVSVACATPTTAKPRASADGISKAPRP 177
           H N +S    T  T KP     G+ K PRP
Sbjct: 484 HKNDISFGLGTDATQKPVVPKPGLGKPPRP 513


>09_01_0027 -
           469856-470773,470780-471261,471296-471408,471453-472003,
           472089-472328
          Length = 767

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +1

Query: 88  HHNSVSVACATPTTAKPRASADGISKAPRP 177
           H N +S    T  T KP     G+ K PRP
Sbjct: 497 HKNDISFGLGTDATEKPVVPKPGLGKPPRP 526


>08_02_0236 +
           14652034-14652225,14652311-14652527,14652561-14653208,
           14653374-14654364,14654532-14654703
          Length = 739

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +1

Query: 88  HHNSVSVACATPTTAKPRASADGISKAPRP 177
           H N +S    T  T KP     G+ K P+P
Sbjct: 443 HKNDISFGLGTDATRKPEVPKPGLGKPPKP 472


>08_01_1064 +
           10841095-10842326,10842412-10842663,10842942-10843020,
           10843274-10843459
          Length = 582

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +1

Query: 88  HHNSVSVACATPTTAKPRASADGISKAPRP 177
           H N +S    T  T KP     G+ K PRP
Sbjct: 141 HKNDISFGLGTDATQKPVVPKPGLGKPPRP 170


>07_03_0316 +
           16684100-16684339,16684425-16685132,16685241-16685939,
           16685992-16686053,16686096-16686368,16686622-16686873,
           16686954-16687064,16687152-16687212,16687312-16687404,
           16687482-16687667
          Length = 894

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +1

Query: 88  HHNSVSVACATPTTAKPRASADGISKAPRP 177
           H N +S    T  T KP     G+ K PRP
Sbjct: 489 HKNDISFGLGTDATRKPVVPKPGLGKPPRP 518


>06_02_0050 -
           10951725-10951910,10951988-10952021,10952521-10952772,
           10953093-10954114
          Length = 497

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +1

Query: 88  HHNSVSVACATPTTAKPRASADGISKAPRP 177
           H N +S    T  T KP     G+ K PRP
Sbjct: 141 HKNDISFGLGTDATQKPVVPKPGLGKPPRP 170


>05_03_0470 +
           14448243-14448482,14448568-14449181,14449508-14450135,
           14450217-14450827,14450911-14451162,14451243-14451353,
           14451441-14451501,14451603-14451695,14451773-14451940
          Length = 925

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +1

Query: 88  HHNSVSVACATPTTAKPRASADGISKAPRP 177
           H N +S    T  T KP     G+ K PRP
Sbjct: 461 HKNDISFGLGTDATQKPVVPKPGLGKPPRP 490


>03_05_0594 +
           25981587-25981826,25981912-25982160,25982257-25983818,
           25984139-25984390,25984471-25984581,25984669-25984729,
           25984829-25984921,25984999-25985184
          Length = 917

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +1

Query: 88  HHNSVSVACATPTTAKPRASADGISKAPRP 177
           H N +S    T  T KP     G+ K PRP
Sbjct: 493 HKNDISFGLGTDATQKPVVPKPGLGKPPRP 522


>02_02_0129 +
           7055896-7056135,7056404-7056771,7056816-7056928,
           7057014-7057118,7057283-7057860,7057889-7058346,
           7058430-7058681,7058762-7058872,7058960-7059020,
           7059122-7059214,7059292-7059477
          Length = 854

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +1

Query: 88  HHNSVSVACATPTTAKPRASADGISKAPRP 177
           H N +S    T  T KP     G+ K PRP
Sbjct: 366 HKNDISFGLGTDATQKPVVPKPGLGKPPRP 395


>01_02_0106 -
           11175200-11175385,11175463-11175496,11175987-11176247,
           11176501-11176831,11176899-11177589,11177611-11178156,
           11178441-11178680
          Length = 762

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +1

Query: 88  HHNSVSVACATPTTAKPRASADGISKAPRP 177
           H N +S    T  T KP     G+ K PRP
Sbjct: 403 HKNDISFGLGTDATQKPVVPKPGLGKPPRP 432


>05_03_0033 - 7585267-7586028
          Length = 253

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 21/108 (19%), Positives = 42/108 (38%)
 Frame = +1

Query: 7   PNPIFIRGTQPDAPPSMFIQHSPQNTVHHNSVSVACATPTTAKPRASADGISKAPRPLSN 186
           P P  +  +QP++ P+ + +  P++     S     A  +T +P A ++  S+ P+P S 
Sbjct: 85  PEPEAMSASQPESKPATYSESKPESKAEPESKPEPKA-ESTPQPEAKSEPKSE-PKPKSE 142

Query: 187 ILPSGGIRPNSNVSTQTXXXXXXXXXKQRGKPGVRSPAPANKQDAVNQ 330
           +       P S   ++           +        P P  +  A +Q
Sbjct: 143 LYAEPKSEPKSEPQSEPNPETKAEPKSEPKSEPKSEPTPQTEPKAESQ 190


>11_04_0240 - 15246357-15246935,15247100-15247561
          Length = 346

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
 Frame = -3

Query: 190 GCSITDEEP-SKSHRQKHXXXXXXASHTLRSRCCGGQCSAAS 68
           G  + D  P S    Q H       S   R RCCG QCS  S
Sbjct: 109 GWVVWDNVPVSTGAEQGHAEIMRALSQIQRKRCCGPQCSRYS 150


>03_05_0190 -
           21770610-21770641,21770741-21770811,21771058-21771168,
           21771249-21771500,21771584-21772086,21772188-21773234,
           21773361-21773768,21773814-21773956,21774020-21774053
          Length = 866

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +1

Query: 88  HHNSVSVACATPTTAKPRASADGISKAPRP 177
           H N +S    T  T KP     G+ K PRP
Sbjct: 475 HKNDISFGLGTDATQKPVVPKLGLGKPPRP 504


>01_03_0230 -
           14004159-14004344,14004422-14004514,14004613-14004673,
           14004761-14004874,14004955-14005206,14005293-14007037
          Length = 816

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +1

Query: 88  HHNSVSVACATPTTAKPRASADGISKAPRP 177
           H N +S    T  T KP     G+ K PRP
Sbjct: 314 HKNDISFGLGTDATQKPVVPKLGLGKPPRP 343


>01_05_0137 +
           18492866-18493105,18493191-18493481,18494006-18494208,
           18494308-18494512,18494525-18494743,18494748-18495085,
           18495408-18495669,18496339-18496524
          Length = 647

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 85  VHHNSVSVACATPTTAKPRASADGISKAPRP 177
           +H N +S    T    KP     G+ K PRP
Sbjct: 313 LHKNDISFGLGTDAMRKPVVPKPGLEKPPRP 343


>11_01_0678 -
           5534879-5534883,5535430-5535529,5535638-5535799,
           5536000-5536966,5537444-5537561,5538682-5538871,
           5538952-5539107,5539296-5540315
          Length = 905

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 428 CLARSLSAPSDRDEFITNNCCFD 360
           C     S P+ ++ + T NCCFD
Sbjct: 200 CFLNFSSCPALKELYFTKNCCFD 222


>08_01_0985 -
           9960064-9960249,9960327-9960419,9960518-9960578,
           9960667-9960774,9960921-9961106,9961427-9962421,
           9962626-9962988,9963085-9963333,9963419-9963574
          Length = 798

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +1

Query: 88  HHNSVSVACATPTTAKPRASADGISKAPRP 177
           H N +S    T    KP     G+ K PRP
Sbjct: 397 HKNDISFGLGTDAKQKPVVPKPGLGKPPRP 426


>06_03_0923 -
           25972063-25972840,25973549-25973620,25973711-25973747,
           25973852-25973910,25974011-25974295,25974653-25974954,
           25974986-25975116,25975209-25975296
          Length = 583

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 134 FAVVGVAHATLTLLWWTVFCGECCMNMEGGASG 36
           F V  V  A+L L  +   C  CC +  GG +G
Sbjct: 116 FVVAAVWFASLALAAFVACCCRCCCSGAGGGNG 148


>06_03_0625 + 22854341-22854431,22854527-22854777
          Length = 113

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = +1

Query: 34  QPDAPPSMFIQHSPQNTVHHNSVSVACATPTTAKPRASADGISKAPRPLSNI 189
           QP+ P S ++   P+     + V  A A      PRA+A  + + PR  + +
Sbjct: 41  QPNDPGSGWLDRVPRAAAGVDRVPRAAAAGVDRVPRAAAATVDRVPRAAAGV 92


>05_07_0294 -
           29038259-29038420,29038526-29038632,29038889-29039093,
           29039173-29039536,29039588-29039772,29039879-29040080,
           29040697-29041589
          Length = 705

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 154 GISKAPRPLSNILPSGGIRPNSNVST 231
           G S A  PL+N LP+G I P+  V++
Sbjct: 131 GGSTASSPLTNALPTGNICPSGRVAS 156


>03_02_0915 + 12360079-12360095,12360225-12361353
          Length = 381

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 19/65 (29%), Positives = 33/65 (50%)
 Frame = +1

Query: 40  DAPPSMFIQHSPQNTVHHNSVSVACATPTTAKPRASADGISKAPRPLSNILPSGGIRPNS 219
           D  P+  ++ +  N +   + + A A+  T K R+SA   S AP+P +   P+      S
Sbjct: 220 DLIPNTTLRTTIANLLATTTGAAASASSGTDKTRSSAG--SNAPQPAAPQSPAASQASRS 277

Query: 220 NVSTQ 234
           NVS++
Sbjct: 278 NVSSK 282


>01_03_0167 - 13379143-13379988
          Length = 281

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
 Frame = -2

Query: 170 GAFEIPSAEARGFAVV-GVAHAT----LTLLWWTVFCGECCM 60
           GAF +P+A   G A+V  V +A     + L W    CG CC+
Sbjct: 162 GAFLLPAAVRTGQALVYAVCYAARGAGVVLAWVLPRCGRCCV 203


>01_03_0093 -
           12422558-12422607,12422679-12422935,12423565-12423932,
           12423939-12424800,12425247-12425464
          Length = 584

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +1

Query: 88  HHNSVSVACATPTTAKPRASADGISKAPR 174
           H N +S    T  T KP     G+ K+PR
Sbjct: 395 HKNHISFGLGTDATQKPVVPKPGLGKSPR 423


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.308    0.124    0.354 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,471,857
Number of Sequences: 37544
Number of extensions: 284894
Number of successful extensions: 680
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1198356516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)

- SilkBase 1999-2023 -