SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0686
         (540 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR381696-3|CAI95411.1|  266|Homo sapiens dehydrogenase/reductase...    33   0.48 
BX649443-3|CAI95432.1|  266|Homo sapiens dehydrogenase/reductase...    33   0.48 
AF453950-1|AAL41025.1|  389|Homo sapiens unknown protein.              32   1.1  
BC030578-1|AAH30578.1|  515|Homo sapiens EIF4G3 protein protein.       30   4.5  
AL672037-2|CAI16194.1|  630|Homo sapiens eukaryotic translation ...    30   4.5  
AL627311-2|CAI14553.1| 1585|Homo sapiens eukaryotic translation ...    30   4.5  
AL627311-1|CAI14552.1|  630|Homo sapiens eukaryotic translation ...    30   4.5  
AL606477-7|CAI12534.1| 1585|Homo sapiens eukaryotic translation ...    30   4.5  
AL358392-2|CAI12155.1| 1585|Homo sapiens eukaryotic translation ...    30   4.5  
AL358392-1|CAI12154.1|  630|Homo sapiens eukaryotic translation ...    30   4.5  
AF012072-1|AAC02903.2| 1585|Homo sapiens eIF4GII protein.              30   4.5  
Z93024-1|CAI18789.1|  720|Homo sapiens G-2 and S-phase expressed...    30   6.0  
CT841519-1|CAJ86449.1|  720|Homo sapiens GTSE1 protein.                30   6.0  
BC075828-1|AAH75828.1|  720|Homo sapiens G-2 and S-phase express...    30   6.0  
BC006325-1|AAH06325.1|  720|Homo sapiens G-2 and S-phase express...    30   6.0  
AL031588-1|CAI19318.1|  720|Homo sapiens G-2 and S-phase express...    30   6.0  
AK222806-1|BAD96526.1|  720|Homo sapiens G-2 and S-phase express...    30   6.0  
AF223408-1|AAF31459.1|  720|Homo sapiens B99 protein.                  30   6.0  
AB209119-1|BAD92356.1| 1780|Homo sapiens eukaryotic translation ...    29   7.9  

>CR381696-3|CAI95411.1|  266|Homo sapiens dehydrogenase/reductase
           (SDR family) X-linked protein.
          Length = 266

 Score = 33.5 bits (73), Expect = 0.48
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +1

Query: 67  HSPQNTVHHNSVSVACATPTTAKPRASADGISKAPRPLSNILP 195
           H+P+   H  ++  AC  P TA+PR + +G S  PR L    P
Sbjct: 71  HAPRPR-HQAALPAACGRPVTARPRQAPEGRSGRPRDLDPYPP 112


>BX649443-3|CAI95432.1|  266|Homo sapiens dehydrogenase/reductase
           (SDR family) X-linked protein.
          Length = 266

 Score = 33.5 bits (73), Expect = 0.48
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +1

Query: 67  HSPQNTVHHNSVSVACATPTTAKPRASADGISKAPRPLSNILP 195
           H+P+   H  ++  AC  P TA+PR + +G S  PR L    P
Sbjct: 71  HAPRPR-HQAALPAACGRPVTARPRQAPEGRSGRPRDLDPYPP 112


>AF453950-1|AAL41025.1|  389|Homo sapiens unknown protein.
          Length = 389

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
 Frame = +1

Query: 1   LTPNPIFIRGTQPDAPPSMFIQHSPQNTVHHNSVSVACATPTTAKPRASADGISKA---P 171
           L P P F+  + P A P     H P +   H    V  ++PT  +P     G S     P
Sbjct: 204 LHPRP-FVHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHP 262

Query: 172 RPLSNILPSGGIRP 213
           RP  +      +RP
Sbjct: 263 RPFLHASSPTALRP 276



 Score = 30.7 bits (66), Expect = 3.4
 Identities = 17/57 (29%), Positives = 23/57 (40%)
 Frame = +1

Query: 1   LTPNPIFIRGTQPDAPPSMFIQHSPQNTVHHNSVSVACATPTTAKPRASADGISKAP 171
           L P P F+  + P A P     H P +   H    V  ++PT  +P     G S  P
Sbjct: 148 LHPRP-FLHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMP 203



 Score = 29.9 bits (64), Expect = 6.0
 Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 3/74 (4%)
 Frame = +1

Query: 1   LTPNPIFIRGTQPDAPPSMFIQHSPQNTVHHNSVSVACATPTTAKPRASADGISKA---P 171
           L P P F+  + P A P     H P +   H    +  ++PT   P     G S     P
Sbjct: 120 LHPRP-FVHASSPTALPPCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTHGPSSMPLHP 178

Query: 172 RPLSNILPSGGIRP 213
           RP  +      +RP
Sbjct: 179 RPFVHASSPTALRP 192


>BC030578-1|AAH30578.1|  515|Homo sapiens EIF4G3 protein protein.
          Length = 515

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
 Frame = +1

Query: 31  TQPDAPPSMFIQHSPQNTVHHNSVSVACATPTTA------KPRASADGISKAPRPLSNIL 192
           T P   PS   +HSP       S  +A +TP TA      + +   D + K+P P+  ++
Sbjct: 190 TPPQQLPSQVPEHSPVVYGTVESAHLAASTPVTAASDQKQEEKPKPDPVLKSPSPVLRLV 249

Query: 193 PSGGIRPNSNVSTQT 237
            SG  +     +++T
Sbjct: 250 LSGEKKEQEGQTSET 264


>AL672037-2|CAI16194.1|  630|Homo sapiens eukaryotic translation
           initiation factor 4 gamma,udogene 1 protein.
          Length = 630

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
 Frame = +1

Query: 31  TQPDAPPSMFIQHSPQNTVHHNSVSVACATPTTA------KPRASADGISKAPRPLSNIL 192
           T P   PS   +HSP       S  +A +TP TA      + +   D + K+P P+  ++
Sbjct: 305 TPPQQLPSQVPEHSPVVYGTVESAHLAASTPVTAASDQKQEEKPKPDPVLKSPSPVLRLV 364

Query: 193 PSGGIRPNSNVSTQT 237
            SG  +     +++T
Sbjct: 365 LSGEKKEQEGQTSET 379


>AL627311-2|CAI14553.1| 1585|Homo sapiens eukaryotic translation
           initiation factor 4 gamma,actor receptor 3 (achondroplas
           protein.
          Length = 1585

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
 Frame = +1

Query: 31  TQPDAPPSMFIQHSPQNTVHHNSVSVACATPTTA------KPRASADGISKAPRPLSNIL 192
           T P   PS   +HSP       S  +A +TP TA      + +   D + K+P P+  ++
Sbjct: 179 TPPQQLPSQVPEHSPVVYGTVESAHLAASTPVTAASDQKQEEKPKPDPVLKSPSPVLRLV 238

Query: 193 PSGGIRPNSNVSTQT 237
            SG  +     +++T
Sbjct: 239 LSGEKKEQEGQTSET 253


>AL627311-1|CAI14552.1|  630|Homo sapiens eukaryotic translation
           initiation factor 4 gamma,-Asp/His) box polypeptide 11 (
           protein.
          Length = 630

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
 Frame = +1

Query: 31  TQPDAPPSMFIQHSPQNTVHHNSVSVACATPTTA------KPRASADGISKAPRPLSNIL 192
           T P   PS   +HSP       S  +A +TP TA      + +   D + K+P P+  ++
Sbjct: 305 TPPQQLPSQVPEHSPVVYGTVESAHLAASTPVTAASDQKQEEKPKPDPVLKSPSPVLRLV 364

Query: 193 PSGGIRPNSNVSTQT 237
            SG  +     +++T
Sbjct: 365 LSGEKKEQEGQTSET 379


>AL606477-7|CAI12534.1| 1585|Homo sapiens eukaryotic translation
           initiation factor 4 gamma,(S. cerevisiae) protein.
          Length = 1585

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
 Frame = +1

Query: 31  TQPDAPPSMFIQHSPQNTVHHNSVSVACATPTTA------KPRASADGISKAPRPLSNIL 192
           T P   PS   +HSP       S  +A +TP TA      + +   D + K+P P+  ++
Sbjct: 179 TPPQQLPSQVPEHSPVVYGTVESAHLAASTPVTAASDQKQEEKPKPDPVLKSPSPVLRLV 238

Query: 193 PSGGIRPNSNVSTQT 237
            SG  +     +++T
Sbjct: 239 LSGEKKEQEGQTSET 253


>AL358392-2|CAI12155.1| 1585|Homo sapiens eukaryotic translation
           initiation factor 4 gamma,fluid) protein.
          Length = 1585

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
 Frame = +1

Query: 31  TQPDAPPSMFIQHSPQNTVHHNSVSVACATPTTA------KPRASADGISKAPRPLSNIL 192
           T P   PS   +HSP       S  +A +TP TA      + +   D + K+P P+  ++
Sbjct: 179 TPPQQLPSQVPEHSPVVYGTVESAHLAASTPVTAASDQKQEEKPKPDPVLKSPSPVLRLV 238

Query: 193 PSGGIRPNSNVSTQT 237
            SG  +     +++T
Sbjct: 239 LSGEKKEQEGQTSET 253


>AL358392-1|CAI12154.1|  630|Homo sapiens eukaryotic translation
           initiation factor 4 gamma,e protein.
          Length = 630

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
 Frame = +1

Query: 31  TQPDAPPSMFIQHSPQNTVHHNSVSVACATPTTA------KPRASADGISKAPRPLSNIL 192
           T P   PS   +HSP       S  +A +TP TA      + +   D + K+P P+  ++
Sbjct: 305 TPPQQLPSQVPEHSPVVYGTVESAHLAASTPVTAASDQKQEEKPKPDPVLKSPSPVLRLV 364

Query: 193 PSGGIRPNSNVSTQT 237
            SG  +     +++T
Sbjct: 365 LSGEKKEQEGQTSET 379


>AF012072-1|AAC02903.2| 1585|Homo sapiens eIF4GII protein.
          Length = 1585

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
 Frame = +1

Query: 31  TQPDAPPSMFIQHSPQNTVHHNSVSVACATPTTA------KPRASADGISKAPRPLSNIL 192
           T P   PS   +HSP       S  +A +TP TA      + +   D + K+P P+  ++
Sbjct: 179 TPPQQLPSQVPEHSPVVYGTVESAHLAASTPVTAASDQKQEEKPKPDPVLKSPSPVLRLV 238

Query: 193 PSGGIRPNSNVSTQT 237
            SG  +     +++T
Sbjct: 239 LSGEKKEQEGQTSET 253


>Z93024-1|CAI18789.1|  720|Homo sapiens G-2 and S-phase expressed 1
           protein.
          Length = 720

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
 Frame = +1

Query: 7   PNPIFIRGTQPDAPPSMF-IQHSPQNTVHHNSVSVACATPTTAKPRAS--ADGISKAPRP 177
           PN + ++ T   AP S   +     +    +  S AC +P   K ++S  A   + + RP
Sbjct: 288 PNKLGLKKTLLKAPGSTSNLARKSSSGPVWSGASSACTSPAVGKAKSSEFASIPANSSRP 347

Query: 178 LSNILPSGGIRP 213
           LSNI  SG + P
Sbjct: 348 LSNISKSGRMGP 359


>CT841519-1|CAJ86449.1|  720|Homo sapiens GTSE1 protein.
          Length = 720

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
 Frame = +1

Query: 7   PNPIFIRGTQPDAPPSMF-IQHSPQNTVHHNSVSVACATPTTAKPRAS--ADGISKAPRP 177
           PN + ++ T   AP S   +     +    +  S AC +P   K ++S  A   + + RP
Sbjct: 288 PNKLGLKKTLLKAPGSTSNLARKSSSGPVWSGASSACTSPAVGKAKSSEFASIPANSSRP 347

Query: 178 LSNILPSGGIRP 213
           LSNI  SG + P
Sbjct: 348 LSNISKSGRMGP 359


>BC075828-1|AAH75828.1|  720|Homo sapiens G-2 and S-phase expressed
           1 protein.
          Length = 720

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
 Frame = +1

Query: 7   PNPIFIRGTQPDAPPSMF-IQHSPQNTVHHNSVSVACATPTTAKPRAS--ADGISKAPRP 177
           PN + ++ T   AP S   +     +    +  S AC +P   K ++S  A   + + RP
Sbjct: 288 PNKLGLKKTLLKAPGSTSNLARKSSSGPVWSGASSACTSPAVGKAKSSEFASIPANSSRP 347

Query: 178 LSNILPSGGIRP 213
           LSNI  SG + P
Sbjct: 348 LSNISKSGRMGP 359


>BC006325-1|AAH06325.1|  720|Homo sapiens G-2 and S-phase expressed
           1 protein.
          Length = 720

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
 Frame = +1

Query: 7   PNPIFIRGTQPDAPPSMF-IQHSPQNTVHHNSVSVACATPTTAKPRAS--ADGISKAPRP 177
           PN + ++ T   AP S   +     +    +  S AC +P   K ++S  A   + + RP
Sbjct: 288 PNKLGLKKTLLKAPGSTSNLARKSSSGPVWSGASSACTSPAVGKAKSSEFASIPANSSRP 347

Query: 178 LSNILPSGGIRP 213
           LSNI  SG + P
Sbjct: 348 LSNISKSGRMGP 359


>AL031588-1|CAI19318.1|  720|Homo sapiens G-2 and S-phase expressed
           1 protein.
          Length = 720

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
 Frame = +1

Query: 7   PNPIFIRGTQPDAPPSMF-IQHSPQNTVHHNSVSVACATPTTAKPRAS--ADGISKAPRP 177
           PN + ++ T   AP S   +     +    +  S AC +P   K ++S  A   + + RP
Sbjct: 288 PNKLGLKKTLLKAPGSTSNLARKSSSGPVWSGASSACTSPAVGKAKSSEFASIPANSSRP 347

Query: 178 LSNILPSGGIRP 213
           LSNI  SG + P
Sbjct: 348 LSNISKSGRMGP 359


>AK222806-1|BAD96526.1|  720|Homo sapiens G-2 and S-phase expressed
           1 variant protein.
          Length = 720

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
 Frame = +1

Query: 7   PNPIFIRGTQPDAPPSMF-IQHSPQNTVHHNSVSVACATPTTAKPRAS--ADGISKAPRP 177
           PN + ++ T   AP S   +     +    +  S AC +P   K ++S  A   + + RP
Sbjct: 288 PNKLGLKKTLLKAPGSTSDLARKSSSGPVWSGASSACTSPAVGKAKSSEFASIPANSSRP 347

Query: 178 LSNILPSGGIRP 213
           LSNI  SG + P
Sbjct: 348 LSNISKSGRMGP 359


>AF223408-1|AAF31459.1|  720|Homo sapiens B99 protein.
          Length = 720

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
 Frame = +1

Query: 7   PNPIFIRGTQPDAPPSMF-IQHSPQNTVHHNSVSVACATPTTAKPRAS--ADGISKAPRP 177
           PN + ++ T   AP S   +     +    +  S AC +P   K ++S  A   + + RP
Sbjct: 288 PNKLGLKKTLLKAPGSTSNLARKSSSGPVWSGASSACTSPAVGKAKSSEFASIPANSSRP 347

Query: 178 LSNILPSGGIRP 213
           LSNI  SG + P
Sbjct: 348 LSNISKSGRMGP 359


>AB209119-1|BAD92356.1| 1780|Homo sapiens eukaryotic translation
           initiation factor 4 gamma, 3 variant protein.
          Length = 1780

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
 Frame = +1

Query: 7   PNPIFIRGTQPDAP---PSMFIQHSPQNTVHHNSVSVACATPTTA------KPRASADGI 159
           P P   R T    P   PS   +HSP       S  +A +TP TA      + +   D +
Sbjct: 363 PTPPIGRPTSTPTPPQLPSQVPEHSPVVYGTVESAHLAASTPVTAASDQKQEEKPKPDPV 422

Query: 160 SKAPRPLSNILPSGGIRPNSNVSTQT 237
            K+P P+  ++ SG  +     +++T
Sbjct: 423 LKSPSPVLRLVLSGEKKEQEGQTSET 448


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.308    0.124    0.354 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,686,028
Number of Sequences: 237096
Number of extensions: 1472103
Number of successful extensions: 6722
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6712
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)

- SilkBase 1999-2023 -