Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0685
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         24   4.0  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         24   4.0  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   7.0  
DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist mic...    23   9.2  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   9.2  
AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.       23   9.2  
AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       23   9.2  
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       23   9.2  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
 Frame = +2

Query: 53  RDAPPSMFIQHSPQNTVHHNSVSVACATP----TTAKPRASADGISKAPRP 193
           + AP      HS Q+     +V++A A+P    TT     S  G S A  P
Sbjct: 10  QSAPSPPHHHHSSQSPTSTTTVTMATASPVPACTTTTSTTSTSGASAASSP 60


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
 Frame = +2

Query: 53  RDAPPSMFIQHSPQNTVHHNSVSVACATP----TTAKPRASADGISKAPRP 193
           + AP      HS Q+     +V++A A+P    TT     S  G S A  P
Sbjct: 10  QSAPSPPHHHHSSQSPTSTTTVTMATASPVPACTTTTSTTSTSGASAASSP 60


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 671 NVFVAPLIWFVAS 633
           N F+ P +WFVAS
Sbjct: 792 NTFLLPKLWFVAS 804


>DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist
           michelob_x protein.
          Length = 201

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 76  EHGGGRVPVEFP 41
           E GGGR+P+E P
Sbjct: 188 EGGGGRLPIETP 199


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 43  GTQPGRAPLHVHTALAAEHCPPQQRER 123
           G QP  + LH+    A  H P ++R +
Sbjct: 232 GKQPDYSNLHIFGCSAIVHVPAEKRSK 258


>AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 43  GTQPGRAPLHVHTALAAEHCPPQQRER 123
           G QP  + LH+    A  H P ++R +
Sbjct: 2   GKQPDYSNLHIFGCSAIVHVPAEKRSK 28


>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 43  GTQPGRAPLHVHTALAAEHCPPQQRER 123
           G QP  + LH+    A  H P ++R +
Sbjct: 2   GKQPDYSNLHIFGCSAIVHVPAEKRSK 28


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 43  GTQPGRAPLHVHTALAAEHCPPQQRER 123
           G QP  + LH+    A  H P ++R +
Sbjct: 2   GKQPDYSNLHIFGCSAIVHVPAEKRSK 28


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,946
Number of Sequences: 2352
Number of extensions: 11735
Number of successful extensions: 25
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)