BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0685 (698 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 24 4.0 U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 24 4.0 AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 23 7.0 DQ383732-1|ABD47743.1| 201|Anopheles gambiae IAP-antagonist mic... 23 9.2 AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein pr... 23 9.2 AF387858-1|AAL58708.1| 209|Anopheles gambiae integrase protein. 23 9.2 AF387857-1|AAL58707.1| 215|Anopheles gambiae integrase protein. 23 9.2 AF387850-1|AAL58705.1| 209|Anopheles gambiae integrase protein. 23 9.2 >U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. Length = 596 Score = 24.2 bits (50), Expect = 4.0 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 4/51 (7%) Frame = +2 Query: 53 RDAPPSMFIQHSPQNTVHHNSVSVACATP----TTAKPRASADGISKAPRP 193 + AP HS Q+ +V++A A+P TT S G S A P Sbjct: 10 QSAPSPPHHHHSSQSPTSTTTVTMATASPVPACTTTTSTTSTSGASAASSP 60 >U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. Length = 596 Score = 24.2 bits (50), Expect = 4.0 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 4/51 (7%) Frame = +2 Query: 53 RDAPPSMFIQHSPQNTVHHNSVSVACATP----TTAKPRASADGISKAPRP 193 + AP HS Q+ +V++A A+P TT S G S A P Sbjct: 10 QSAPSPPHHHHSSQSPTSTTTVTMATASPVPACTTTTSTTSTSGASAASSP 60 >AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein protein. Length = 1077 Score = 23.4 bits (48), Expect = 7.0 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = -1 Query: 671 NVFVAPLIWFVAS 633 N F+ P +WFVAS Sbjct: 792 NTFLLPKLWFVAS 804 >DQ383732-1|ABD47743.1| 201|Anopheles gambiae IAP-antagonist michelob_x protein. Length = 201 Score = 23.0 bits (47), Expect = 9.2 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = -2 Query: 76 EHGGGRVPVEFP 41 E GGGR+P+E P Sbjct: 188 EGGGGRLPIETP 199 >AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein protein. Length = 942 Score = 23.0 bits (47), Expect = 9.2 Identities = 9/27 (33%), Positives = 14/27 (51%) Frame = +1 Query: 43 GTQPGRAPLHVHTALAAEHCPPQQRER 123 G QP + LH+ A H P ++R + Sbjct: 232 GKQPDYSNLHIFGCSAIVHVPAEKRSK 258 >AF387858-1|AAL58708.1| 209|Anopheles gambiae integrase protein. Length = 209 Score = 23.0 bits (47), Expect = 9.2 Identities = 9/27 (33%), Positives = 14/27 (51%) Frame = +1 Query: 43 GTQPGRAPLHVHTALAAEHCPPQQRER 123 G QP + LH+ A H P ++R + Sbjct: 2 GKQPDYSNLHIFGCSAIVHVPAEKRSK 28 >AF387857-1|AAL58707.1| 215|Anopheles gambiae integrase protein. Length = 215 Score = 23.0 bits (47), Expect = 9.2 Identities = 9/27 (33%), Positives = 14/27 (51%) Frame = +1 Query: 43 GTQPGRAPLHVHTALAAEHCPPQQRER 123 G QP + LH+ A H P ++R + Sbjct: 2 GKQPDYSNLHIFGCSAIVHVPAEKRSK 28 >AF387850-1|AAL58705.1| 209|Anopheles gambiae integrase protein. Length = 209 Score = 23.0 bits (47), Expect = 9.2 Identities = 9/27 (33%), Positives = 14/27 (51%) Frame = +1 Query: 43 GTQPGRAPLHVHTALAAEHCPPQQRER 123 G QP + LH+ A H P ++R + Sbjct: 2 GKQPDYSNLHIFGCSAIVHVPAEKRSK 28 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 633,946 Number of Sequences: 2352 Number of extensions: 11735 Number of successful extensions: 25 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 25 length of database: 563,979 effective HSP length: 62 effective length of database: 418,155 effective search space used: 71086350 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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