Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0685
         (698 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR381696-3|CAI95411.1|  266|Homo sapiens dehydrogenase/reductase...    33   0.74 
BX649443-3|CAI95432.1|  266|Homo sapiens dehydrogenase/reductase...    33   0.74 
X72861-1|CAA51383.1|  408|Homo sapiens beta-3-adrenergic recepto...    30   9.1  
X70811-1|CAA50141.1|  408|Homo sapiens Beta 3 adrenergic recepto...    30   9.1  
M29932-1|AAA35550.1|  402|Homo sapiens protein ( Human beta-3-ad...    30   9.1  
DQ104441-1|AAY88743.1|  408|Homo sapiens adrenergic, beta-3-, re...    30   9.1  
BC075017-1|AAH75017.1|  408|Homo sapiens adrenergic, beta-3-, re...    30   9.1  
AY487247-1|AAR37414.1|  408|Homo sapiens adrenergic receptor bet...    30   9.1  

>CR381696-3|CAI95411.1|  266|Homo sapiens dehydrogenase/reductase
           (SDR family) X-linked protein.
          Length = 266

 Score = 33.5 bits (73), Expect = 0.74
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +2

Query: 83  HSPQNTVHHNSVSVACATPTTAKPRASADGISKAPRPLSNILP 211
           H+P+   H  ++  AC  P TA+PR + +G S  PR L    P
Sbjct: 71  HAPRPR-HQAALPAACGRPVTARPRQAPEGRSGRPRDLDPYPP 112


>BX649443-3|CAI95432.1|  266|Homo sapiens dehydrogenase/reductase
           (SDR family) X-linked protein.
          Length = 266

 Score = 33.5 bits (73), Expect = 0.74
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +2

Query: 83  HSPQNTVHHNSVSVACATPTTAKPRASADGISKAPRPLSNILP 211
           H+P+   H  ++  AC  P TA+PR + +G S  PR L    P
Sbjct: 71  HAPRPR-HQAALPAACGRPVTARPRQAPEGRSGRPRDLDPYPP 112


>X72861-1|CAA51383.1|  408|Homo sapiens beta-3-adrenergic receptor
           protein.
          Length = 408

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 19/60 (31%), Positives = 24/60 (40%)
 Frame = -3

Query: 219 PPEGRMFDNGRGAFEIPSAEARGFAVVGVAHATLTLLWWTVFCGECCMNMEGGASRLSSP 40
           PPEG      R A  +P  E R    +G+   T TL W   F     +   GG S +  P
Sbjct: 268 PPEGVPACGRRPARLLPLREHRALCTLGLIMGTFTLCWLPFFLAN-VLRALGGPSLVPGP 326


>X70811-1|CAA50141.1|  408|Homo sapiens Beta 3 adrenergic receptor
           protein.
          Length = 408

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 19/60 (31%), Positives = 24/60 (40%)
 Frame = -3

Query: 219 PPEGRMFDNGRGAFEIPSAEARGFAVVGVAHATLTLLWWTVFCGECCMNMEGGASRLSSP 40
           PPEG      R A  +P  E R    +G+   T TL W   F     +   GG S +  P
Sbjct: 268 PPEGVPACGRRPARLLPLREHRALCTLGLIMGTFTLCWLPFFLAN-VLRALGGPSLVPGP 326


>M29932-1|AAA35550.1|  402|Homo sapiens protein ( Human
           beta-3-adrenergic receptor gene. ).
          Length = 402

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 19/60 (31%), Positives = 24/60 (40%)
 Frame = -3

Query: 219 PPEGRMFDNGRGAFEIPSAEARGFAVVGVAHATLTLLWWTVFCGECCMNMEGGASRLSSP 40
           PPEG      R A  +P  E R    +G+   T TL W   F     +   GG S +  P
Sbjct: 268 PPEGVPACGRRPARLLPLREHRALCTLGLIMGTFTLCWLPFFLAN-VLRALGGPSLVPGP 326


>DQ104441-1|AAY88743.1|  408|Homo sapiens adrenergic, beta-3-,
           receptor protein.
          Length = 408

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 19/60 (31%), Positives = 24/60 (40%)
 Frame = -3

Query: 219 PPEGRMFDNGRGAFEIPSAEARGFAVVGVAHATLTLLWWTVFCGECCMNMEGGASRLSSP 40
           PPEG      R A  +P  E R    +G+   T TL W   F     +   GG S +  P
Sbjct: 268 PPEGVPACGRRPARLLPLREHRALCTLGLIMGTFTLCWLPFFLAN-VLRALGGPSLVPGP 326


>BC075017-1|AAH75017.1|  408|Homo sapiens adrenergic, beta-3-,
           receptor protein.
          Length = 408

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 19/60 (31%), Positives = 24/60 (40%)
 Frame = -3

Query: 219 PPEGRMFDNGRGAFEIPSAEARGFAVVGVAHATLTLLWWTVFCGECCMNMEGGASRLSSP 40
           PPEG      R A  +P  E R    +G+   T TL W   F     +   GG S +  P
Sbjct: 268 PPEGVPACGRRPARLLPLREHRALCTLGLIMGTFTLCWLPFFLAN-VLRALGGPSLVPGP 326


>AY487247-1|AAR37414.1|  408|Homo sapiens adrenergic receptor beta 3
           protein.
          Length = 408

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 19/60 (31%), Positives = 24/60 (40%)
 Frame = -3

Query: 219 PPEGRMFDNGRGAFEIPSAEARGFAVVGVAHATLTLLWWTVFCGECCMNMEGGASRLSSP 40
           PPEG      R A  +P  E R    +G+   T TL W   F     +   GG S +  P
Sbjct: 268 PPEGVPACGRRPARLLPLREHRALCTLGLIMGTFTLCWLPFFLAN-VLRALGGPSLVPGP 326


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,999,543
Number of Sequences: 237096
Number of extensions: 1872491
Number of successful extensions: 5075
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5075
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)