Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0684
         (421 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094841-1|AAM11194.1|  204|Drosophila melanogaster RE01373p pro...   173   8e-44
AF030251-1|AAB84223.1|  204|Drosophila melanogaster ribosomal L1...   173   8e-44
BT011392-1|AAR96184.1|  504|Drosophila melanogaster AT28457p pro...    29   1.9  
Z98269-1|CAB10975.1| 1589|Drosophila melanogaster EG:87B1.5,FBgn...    28   4.4  
AL132797-4|CAB60096.1| 1359|Drosophila melanogaster EG:BACN25G24...    28   4.4  
AE014298-337|AAF45726.3| 1537|Drosophila melanogaster CG3895-PA ...    28   4.4  
AY122165-1|AAM52677.1|  387|Drosophila melanogaster LD24232p pro...    27   7.7  
AE014298-2749|AAF48868.1|  686|Drosophila melanogaster CG6632-PA...    27   7.7  

>AY094841-1|AAM11194.1|  204|Drosophila melanogaster RE01373p
           protein.
          Length = 204

 Score =  173 bits (421), Expect = 8e-44
 Identities = 82/129 (63%), Positives = 90/129 (69%)
 Frame = +3

Query: 33  MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 212
           MGAYRY+QELYRKK SDVMR+LLR+RVWQYRQLT++HR+PRPTRPDKARRLGYRAKQ   
Sbjct: 1   MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFV 60

Query: 213 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 392
                              TYGKPKSHGVNQLKP R LQSIAEE            +SYW
Sbjct: 61  IYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYW 120

Query: 393 VAQDCLYKY 419
           +AQD  YKY
Sbjct: 121 IAQDASYKY 129


>AF030251-1|AAB84223.1|  204|Drosophila melanogaster ribosomal L15
           (YL10) protein homologueprotein.
          Length = 204

 Score =  173 bits (421), Expect = 8e-44
 Identities = 82/129 (63%), Positives = 90/129 (69%)
 Frame = +3

Query: 33  MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 212
           MGAYRY+QELYRKK SDVMR+LLR+RVWQYRQLT++HR+PRPTRPDKARRLGYRAKQ   
Sbjct: 1   MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFV 60

Query: 213 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 392
                              TYGKPKSHGVNQLKP R LQSIAEE            +SYW
Sbjct: 61  IYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYW 120

Query: 393 VAQDCLYKY 419
           +AQD  YKY
Sbjct: 121 IAQDASYKY 129


>BT011392-1|AAR96184.1|  504|Drosophila melanogaster AT28457p
           protein.
          Length = 504

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 26/102 (25%), Positives = 38/102 (37%), Gaps = 2/102 (1%)
 Frame = -3

Query: 383 AQHTETAATTANTFLSNGLKVARGLQLVDTMALGLAISGTLS-NWTLAATTSHTDSEYNI 207
           A+  ETA  T  T   +   VARG+   D     +A S +     T  AT   T+++   
Sbjct: 32  AETAETAPPTEATSSWSSTAVARGMSSADGAGEAIATSQSAQIGLTTQATVRQTEAQTAS 91

Query: 206 TLFSTVA*SSGFVRPCGPGSAVHTSQLTVLPYP-HTQQKTHN 84
           T     A +S  +      +      L    YP  T+   HN
Sbjct: 92  TATQAAAATSAAIASAAAATETAAEMLISTIYPASTETDLHN 133


>Z98269-1|CAB10975.1| 1589|Drosophila melanogaster
            EG:87B1.5,FBgn0004861;ph-p protein.
          Length = 1589

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = -3

Query: 374  TETAATTANTFLSNGLKVAR--GLQLVDTMALGLAISGTLSNWTLAATTSHTDSEYN 210
            T   +T+  T ++NG+ VAR      V T +     SGT +    + TT+ T S  N
Sbjct: 1235 TSATSTSTTTTITNGIGVARTTASTAVSTASTTTTSSGTFTTSCTSTTTTTTSSISN 1291


>AL132797-4|CAB60096.1| 1359|Drosophila melanogaster
            EG:BACN25G24.3,FBgn0004860;ph-d protein.
          Length = 1359

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = -3

Query: 374  TETAATTANTFLSNGLKVAR--GLQLVDTMALGLAISGTLSNWTLAATTSHTDSEYN 210
            T   +T+  T ++NG+ VAR      V T +     SGT +    + TT+ T S  N
Sbjct: 1005 TSATSTSTTTTITNGIGVARTTASTAVSTASTTTTSSGTFTTSCTSTTTTTTSSISN 1061


>AE014298-337|AAF45726.3| 1537|Drosophila melanogaster CG3895-PA
            protein.
          Length = 1537

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = -3

Query: 374  TETAATTANTFLSNGLKVAR--GLQLVDTMALGLAISGTLSNWTLAATTSHTDSEYN 210
            T   +T+  T ++NG+ VAR      V T +     SGT +    + TT+ T S  N
Sbjct: 1183 TSATSTSTTTTITNGIGVARTTASTAVSTASTTTTSSGTFTTSCTSTTTTTTSSISN 1239


>AY122165-1|AAM52677.1|  387|Drosophila melanogaster LD24232p
           protein.
          Length = 387

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
 Frame = -3

Query: 365 AATTANTFLSNGLKVARGLQLVDTMALGLA-ISGTLSNWTLAATTSHTDSEYNITLFSTV 189
           +ATTA T +SN +       L   +A+G+A  S +L++ +LA  T     +    L  TV
Sbjct: 258 SATTAQTHVSNHIGSIAATHLTLPVAMGVAGGSSSLASSSLATGTGSLVRQLPTNLTHTV 317

Query: 188 A*SSGFVRPCGPGSAVHTSQLTV-LPYPHTQQKTHNIA 78
             +SG            TS +     + H     H+ A
Sbjct: 318 LSTSGGATAAAAAGGNSTSVVAAGTAHGHAHVSGHSAA 355


>AE014298-2749|AAF48868.1|  686|Drosophila melanogaster CG6632-PA
           protein.
          Length = 686

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
 Frame = -3

Query: 365 AATTANTFLSNGLKVARGLQLVDTMALGLA-ISGTLSNWTLAATTSHTDSEYNITLFSTV 189
           +ATTA T +SN +       L   +A+G+A  S +L++ +LA  T     +    L  TV
Sbjct: 258 SATTAQTHVSNHIGSIAATHLTLPVAMGVAGGSSSLASSSLATGTGSLVRQLPTNLTHTV 317

Query: 188 A*SSGFVRPCGPGSAVHTSQLTV-LPYPHTQQKTHNIA 78
             +SG            TS +     + H     H+ A
Sbjct: 318 LSTSGGATAAAAAGGNSTSVVAAGTAHGHAHVSGHSAA 355


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,227,823
Number of Sequences: 53049
Number of extensions: 433983
Number of successful extensions: 1308
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1306
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)