Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0684
         (421 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   3.2  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   4.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   4.3  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   4.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   5.6  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   5.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   5.6  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    20   9.9  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    20   9.9  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    20   9.9  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    20   9.9  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 13  VCHRLLRWVPTDI 51
           VCH  + W+PT +
Sbjct: 807 VCHNGMNWMPTHL 819


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -2

Query: 183 VFGLCPALWAWERGAYESTD 124
           +  +C  LW W R  Y  T+
Sbjct: 51  ILPVCNGLWRWIRLTYGQTN 70


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -2

Query: 183 VFGLCPALWAWERGAYESTD 124
           +  +C  LW W R  Y  T+
Sbjct: 89  ILPVCNGLWRWIRLTYGQTN 108


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = -3

Query: 377 HTETAATTANTFLSNGLKVARGLQLVDTMALGLAISGTLSNWTLAATTSHT 225
           H  T+ T  N    + L VA     V     G+A+S   +N   +  TSH+
Sbjct: 225 HRLTSKTFDNDLRYSELAVAGESFTVHDGIFGMALSPVTNNLYYSPLTSHS 275


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 8/34 (23%), Positives = 13/34 (38%)
 Frame = +2

Query: 86   YAFFVACEGMAVPSVDSYAPRSQAHKAGQSPKTR 187
            Y  +   +    P+     P    H+A +  KTR
Sbjct: 1213 YTVYTKADNAEEPTSQKVPPNQLTHEASELDKTR 1246


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -2

Query: 177 GLCPALWAWERGAY 136
           GLCP++  ++RG +
Sbjct: 357 GLCPSMANYDRGVF 370


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -2

Query: 177 GLCPALWAWERGAY 136
           GLCP++  ++RG +
Sbjct: 447 GLCPSMANYDRGVF 460


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -1

Query: 157 GLGARCIRVN*RYCHTLTRNKKRI 86
           GL A+  RV  R   T+ RN+KR+
Sbjct: 385 GLEAQWSRVLGRVHATIERNEKRL 408


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = -3

Query: 134 SQLTVLPYPHTQQKTHNIAQFFPIQLL 54
           S + +L Y H    TH ++++  +  L
Sbjct: 311 STILILNYHHRNADTHEMSEWVKVVFL 337


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 126 QLTRMHRAPRPTRPDKARRLG 188
           QLT+++ A    RP+   R G
Sbjct: 219 QLTKLNNAVEEKRPELTNRKG 239


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = -2

Query: 255 LDACGHHVAH 226
           + AC HH+ H
Sbjct: 567 IQACSHHLTH 576


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,823
Number of Sequences: 438
Number of extensions: 2482
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10750329
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)