BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0683 (704 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 35 0.046 At2g46180.1 68415.m05742 intracellular protein transport protein... 34 0.11 At2g36340.1 68415.m04460 DNA-binding storekeeper protein-related... 33 0.18 At5g41220.1 68418.m05009 glutathione S-transferase, putative sim... 32 0.32 At1g66170.1 68414.m07511 PHD finger family protein (MMD1) contai... 32 0.43 At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 32 0.43 At3g61390.2 68416.m06872 U-box domain-containing protein several... 31 0.56 At2g30780.1 68415.m03753 pentatricopeptide (PPR) repeat-containi... 31 0.56 At5g65910.1 68418.m08296 BSD domain-containing protein contains ... 31 0.74 At5g60800.1 68418.m07628 heavy-metal-associated domain-containin... 31 0.74 At3g12980.1 68416.m01617 histone acetyltransferase 5 (HAC5) iden... 31 0.74 At5g44610.1 68418.m05466 DREPP plasma membrane polypeptide-relat... 31 0.98 At3g57390.2 68416.m06389 MADS-box protein (AGL18) agamous-like p... 30 1.3 At3g57390.1 68416.m06388 MADS-box protein (AGL18) agamous-like p... 30 1.3 At3g15920.1 68416.m02013 phox (PX) domain-containing protein wea... 30 1.3 At3g05110.1 68416.m00555 hypothetical protein 30 1.3 At3g19860.1 68416.m02515 basic helix-loop-helix (bHLH) family pr... 30 1.7 At1g27850.1 68414.m03413 expressed protein similar to En/Spm-lik... 30 1.7 At5g54050.1 68418.m06722 DC1 domain-containing protein 29 2.3 At5g29624.1 68418.m03640 DC1 domain-containing protein contains ... 29 2.3 At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 29 2.3 At4g27595.1 68417.m03964 protein transport protein-related low s... 29 2.3 At2g28620.1 68415.m03479 kinesin motor protein-related 29 2.3 At1g50750.1 68414.m05707 expressed protein 29 2.3 At5g42880.1 68418.m05226 hypothetical protein contains Pfam prof... 29 3.0 At1g51070.1 68414.m05741 basic helix-loop-helix (bHLH) family pr... 29 3.0 At4g16420.3 68417.m02486 transcriptional adaptor (ADA2b) identic... 29 4.0 At2g30410.1 68415.m03704 tubulin folding cofactor A (KIESEL) ide... 29 4.0 At1g12380.1 68414.m01431 expressed protein 29 4.0 At1g06230.2 68414.m00659 DNA-binding bromodomain-containing prot... 29 4.0 At1g06230.1 68414.m00658 DNA-binding bromodomain-containing prot... 29 4.0 At5g35604.1 68418.m04242 hypothetical protein 28 5.2 At3g04010.1 68416.m00422 glycosyl hydrolase family 17 protein si... 28 5.2 At2g36740.1 68415.m04507 YL1 nuclear family protein similar to Y... 28 5.2 At1g23710.1 68414.m02993 expressed protein 28 5.2 At1g04730.1 68414.m00469 AAA-type ATPase family protein contains... 28 5.2 At5g66150.1 68418.m08333 glycosyl hydrolase family 38 protein si... 28 6.9 At5g41020.1 68418.m04986 myb family transcription factor contain... 28 6.9 At5g01220.1 68418.m00027 UDP-sulfoquinovose:DAG sulfoquinovosylt... 28 6.9 At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial, p... 28 6.9 At4g03430.1 68417.m00470 pre-mRNA splicing factor-related simila... 28 6.9 At3g54670.1 68416.m06049 structural maintenance of chromosomes (... 28 6.9 At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profi... 28 6.9 At5g54030.1 68418.m06720 DC1 domain-containing protein contains ... 27 9.2 At3g01460.1 68416.m00070 PHD finger family protein / methyl-CpG ... 27 9.2 At1g34480.1 68414.m04285 DC1 domain-containing protein contains ... 27 9.2 At1g11670.1 68414.m01340 MATE efflux family protein similar to r... 27 9.2 >At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost identical to CIP1 (GI:836950) [Arabidopsis thaliana] Length = 1305 Score = 35.1 bits (77), Expect = 0.046 Identities = 49/216 (22%), Positives = 99/216 (45%), Gaps = 1/216 (0%) Frame = +3 Query: 21 TIFVLAARAASIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDI 200 TI L + + +K E E + ++V+ + + + ++ +K+++ + +++K V D Sbjct: 28 TIQELISELGEMKEKYKEKESEHSSLVELHKTHER--ESSSQVKELEAHIESSEKLVADF 85 Query: 201 PVKVIVEEIKPSLKSDLENVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEK 380 + E + L S + E+ +E +E + + +L + Q E H E+ Sbjct: 86 TQSLNNAEEEKKLLSQ-KIAELSNEIQEAQNTMQELMS--------ESGQLKESHSVKER 136 Query: 381 IVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASLQHFQENFGAQIQKLNE 560 + S++ DI+ EI R S+ + + +Q+++L ASL+ +E A K E Sbjct: 137 ELFSLR-DIH--EIHQRDSSTRASELEAQLESSKQQVSDLSASLKAAEEENKAISSKNVE 193 Query: 561 TLHFIKPA-DTIAAPSVEETQNKASFETIESGLKSL 665 T++ ++ +TI E + K S ES L SL Sbjct: 194 TMNKLEQTQNTIQELMAELGKLKDSHREKESELSSL 229 >At2g46180.1 68415.m05742 intracellular protein transport protein USO1-related similar to Intracellular protein transport protein USO1 (Swiss-Prot:P25386) [Saccharomyces cerevisiae] Length = 725 Score = 33.9 bits (74), Expect = 0.11 Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Frame = +3 Query: 114 SEQELIDQANTIKDIDNSLRANKKEVIDIPVKVI-VEEIKPSLKSDLENVEVPDENEEIK 290 ++++ + + +KD+D L ++KKE +I KV+ E I K+ + VE D+N +++ Sbjct: 493 AKEDAMKLSARLKDVDEQLESSKKEKEEITSKVLHAENIAAEWKNRVSKVE--DDNAKVR 550 Query: 291 RPL 299 R L Sbjct: 551 RVL 553 >At2g36340.1 68415.m04460 DNA-binding storekeeper protein-related contains similarity to storekeeper protein [Solanum tuberosum] gi|14268476|emb|CAC39398; contains PF04504: Protein of unknown function, DUF573 Length = 414 Score = 33.1 bits (72), Expect = 0.18 Identities = 20/81 (24%), Positives = 37/81 (45%) Frame = +3 Query: 42 RAASIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVE 221 +A +P PE D P D+ E ++AN +IDN +R + D+P Sbjct: 167 QAKDVPSGEPETNDVPCEEQDDRDVPCEEQERANI--EIDNGVREKLDQAKDVPCVEQES 224 Query: 222 EIKPSLKSDLENVEVPDENEE 284 E P ++ + ++E+ + +E Sbjct: 225 EDVPCVEQERVSIEIDNGEKE 245 >At5g41220.1 68418.m05009 glutathione S-transferase, putative similar to emb|CAA10662 Length = 590 Score = 32.3 bits (70), Expect = 0.32 Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Frame = +3 Query: 81 DKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLKSDLENV 260 D+ + N S +D+ + D+ ++++K++ + + +EE + S LEN+ Sbjct: 417 DRVYSSSSNPESVPIALDEEEQVMDLPLGVKSSKQKEKKVATIITIEEREADSGSRLENL 476 Query: 261 EVPDENEEI-KRPL 299 V DE E++ RPL Sbjct: 477 WVLDEEEQVMDRPL 490 >At1g66170.1 68414.m07511 PHD finger family protein (MMD1) contains Pfam profile: PF00628: PHD-finger Length = 704 Score = 31.9 bits (69), Expect = 0.43 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = -2 Query: 517 CCKLAWSSLICSVRAYHFPIPSDTSW 440 C WS+ S R YHF IP DT W Sbjct: 95 CRCTGWSNHFVSKRKYHFIIPIDTEW 120 >At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612: reticulocyte binding protein; similar to Myosin heavy chain, non-muscle (Zipper protein) (Myosin II) (SP:Q99323) {Drosophila melanogaster} similar to EST gb|T76116 Length = 1730 Score = 31.9 bits (69), Expect = 0.43 Identities = 44/206 (21%), Positives = 91/206 (44%), Gaps = 4/206 (1%) Frame = +3 Query: 99 VDNLSSEQELIDQ-ANTIKDIDNSLRANKKEVIDIPVKV-IVEEIKPSLKSDLENVEVP- 269 VD ++ +++ + K+++ L A K+E + + +++ + + +E + +P Sbjct: 768 VDGYKNQIDMLSRDLERTKELETELVATKEERDQLQQSLSLIDTLLQKVMKSVEIIALPV 827 Query: 270 DENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQ-GFQE 446 D E +D R G QE + E E+ EK+ S V D T+++A Q + Sbjct: 828 DLASEDPSEKID-RLAG--YIQEVQLARVEEQEEIEKVKSEV--DALTSKLAETQTALKL 882 Query: 447 VSDGIGKWYARTEQINELQASLQHFQENFGAQIQKLNETLHFIKPADTIAAPSVEETQNK 626 V D + ++ E ++Q +EN ++QK + A ++A+ E K Sbjct: 883 VEDALSTAEDNISRLTEENRNVQAAKENAELELQKA------VADASSVASELDEVLATK 936 Query: 627 ASFETIESGLKSLETNFNSGLNQLSE 704 + T+E+ L E N + +++ E Sbjct: 937 S---TLEAALMQAERNISDIISEKEE 959 >At3g61390.2 68416.m06872 U-box domain-containing protein several hypothetical proteins - Arabidopsis thaliana Length = 435 Score = 31.5 bits (68), Expect = 0.56 Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 1/80 (1%) Frame = +3 Query: 264 VPDENEEIKRPLVDLRN-PGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGF 440 + +E EE+K L ++ G + +E T N H E + + + +DI GF Sbjct: 319 IREEQEELKIKLREVSKLKGKREEEEASTSN--HREPPQYFICPITHDIMEDPHVAADGF 376 Query: 441 QEVSDGIGKWYARTEQINEL 500 + I +W+ R + + + Sbjct: 377 TYEGEAISRWFERGHETSPM 396 >At2g30780.1 68415.m03753 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat Length = 452 Score = 31.5 bits (68), Expect = 0.56 Identities = 17/46 (36%), Positives = 26/46 (56%) Frame = +3 Query: 345 TQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYART 482 T P HH D + VS +K+++ T + ++ FQ V D G+W RT Sbjct: 20 TSLPAHHTDLVQRVSILKDELLTIGNS-KEKFQNVLDQKGQWLFRT 64 >At5g65910.1 68418.m08296 BSD domain-containing protein contains Pfam profile PF03909: BSD domain Length = 432 Score = 31.1 bits (67), Expect = 0.74 Identities = 13/52 (25%), Positives = 23/52 (44%) Frame = +3 Query: 306 LRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGI 461 L P + Q P+H E+ E +++ +KND R G ++S + Sbjct: 64 LSQPSSSPDLQERNQTPDHPEEDEDLIAGIKNDFAEIGGRFRTGISKLSGNL 115 >At5g60800.1 68418.m07628 heavy-metal-associated domain-containing protein similar to farnesylated protein ATFP3 [GI:4097547]; contains Pfam profile PF00403: Heavy-metal-associated domain Length = 283 Score = 31.1 bits (67), Expect = 0.74 Identities = 19/61 (31%), Positives = 34/61 (55%) Frame = +3 Query: 228 KPSLKSDLENVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDI 407 K ++ L+ V++ ++ EE + VDL +P P + +E E +N ++ ED +K K D Sbjct: 64 KLTVTGALDPVKLREKLEEKTKKKVDLVSPQPKKEKEKENKN-KNDEDKKKSEEKKKPDN 122 Query: 408 N 410 N Sbjct: 123 N 123 >At3g12980.1 68416.m01617 histone acetyltransferase 5 (HAC5) identical to HAC5 (GI:21105780) [Arabidopsis thaliana]; similar to CREB-binding protein GB:S39162 from [Homo sapiens] Length = 1670 Score = 31.1 bits (67), Expect = 0.74 Identities = 13/46 (28%), Positives = 27/46 (58%) Frame = +3 Query: 423 ALRQGFQEVSDGIGKWYARTEQINELQASLQHFQENFGAQIQKLNE 560 +L G Q VS G+G+W++ ++ + + + +E+FG + K +E Sbjct: 524 SLSAGVQPVS-GLGQWHSSSQNLTPISKNSNEEREHFGVRFHKQHE 568 >At5g44610.1 68418.m05466 DREPP plasma membrane polypeptide-related contains Pfam profile: PF05558 DREPP plasma membrane polypeptide Length = 168 Score = 30.7 bits (66), Expect = 0.98 Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 3/92 (3%) Frame = +3 Query: 72 EAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLKSDL 251 E E KP ++ E E++++ + + + +++PV EE KP+++ + Sbjct: 50 EGETKPEEIIATGEKEIEIVEE-----------KKEEAKPVEVPVLAAAEEKKPAVEEEK 98 Query: 252 ENVEVPDEN---EEIKRPLVDLRNPGPPQHQE 338 + V ++ EE K+P V+ + P + +E Sbjct: 99 KTAPVEEKKPAVEEEKKPAVEEKKPVEEEKKE 130 >At3g57390.2 68416.m06389 MADS-box protein (AGL18) agamous-like protein 15 - Arabidopsis thaliana, PIR:S71200 Length = 195 Score = 30.3 bits (65), Expect = 1.3 Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 6/110 (5%) Frame = +3 Query: 60 DKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSL 239 +++ E + ++ D +S E +L + +++KD + N+ E I K +EE L Sbjct: 55 ERLKGKELEGMSFPDLISLENQLNESLHSVKDQKTQILLNQIERSRIQEKKALEE-NQIL 113 Query: 240 KSDLENV------EVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHED 371 + +E + +V +E + P D P +E E N EHH D Sbjct: 114 RKQVEMLGRGSGPKVLNERPQDSSPEAD---PESSSSEEDENDNEEHHSD 160 >At3g57390.1 68416.m06388 MADS-box protein (AGL18) agamous-like protein 15 - Arabidopsis thaliana, PIR:S71200 Length = 256 Score = 30.3 bits (65), Expect = 1.3 Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 6/110 (5%) Frame = +3 Query: 60 DKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSL 239 +++ E + ++ D +S E +L + +++KD + N+ E I K +EE L Sbjct: 116 ERLKGKELEGMSFPDLISLENQLNESLHSVKDQKTQILLNQIERSRIQEKKALEE-NQIL 174 Query: 240 KSDLENV------EVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHED 371 + +E + +V +E + P D P +E E N EHH D Sbjct: 175 RKQVEMLGRGSGPKVLNERPQDSSPEAD---PESSSSEEDENDNEEHHSD 221 >At3g15920.1 68416.m02013 phox (PX) domain-containing protein weak similarity to myosin heavy chain [Rana catesbeiana] GI:4249699; contains Pfam profile PF00787: PX domain Length = 755 Score = 30.3 bits (65), Expect = 1.3 Identities = 32/140 (22%), Positives = 66/140 (47%), Gaps = 2/140 (1%) Frame = +3 Query: 117 EQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLKSDLE--NVEVPDENEEIK 290 E+ ++D+ I + +K+ +++ + + IK K+ +E N + EN+ + Sbjct: 481 EKTVLDEKERFTQIQWDMEELRKQCMEM--ESFLNSIKDE-KTHIETANESLVQENQMLL 537 Query: 291 RPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKW 470 + + D+R H+EHE + + + +V VK+ + T + LR QE+S GI K Sbjct: 538 QQINDIRENFENFHKEHEELEVKAKAELKVLVKEVKS-LRTTQSDLR---QELS-GIMKE 592 Query: 471 YARTEQINELQASLQHFQEN 530 E+I + + + +N Sbjct: 593 KLEMERIVQREKDREETAKN 612 >At3g05110.1 68416.m00555 hypothetical protein Length = 372 Score = 30.3 bits (65), Expect = 1.3 Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 19/157 (12%) Frame = +3 Query: 102 DNLSSEQELIDQA-NTIKDIDNSLRA--NKKEVIDIPVKVIVEEIKP-SLKS-DLENVEV 266 + + E ELI+ + ++ +N LR K++ D+ K + E+ K LK ++ + Sbjct: 53 ERMRKETELIETSLKQLEARENELREVEAKRKFFDLKEKELEEKEKELELKQRQVQERSI 112 Query: 267 PDENEEIKRPLVDLRNPGPPQHQEHET----------QNPEHHEDAEKIVSSVKNDINTA 416 D PL RN ++ +N E HE +V S ND Sbjct: 113 QDGPSVDAEPLTQQRNHNDEDKEKDSASVLSASVQIIENDEDHEPVMCVVDSEFNDFRKT 172 Query: 417 EIALRQG----FQEVSDGIGKWYARTEQINELQASLQ 515 + G + D + + Y R +++N+ Q+SLQ Sbjct: 173 MSSFMAGQVWALYDGIDSMPRCYGRIKKVNKCQSSLQ 209 >At3g19860.1 68416.m02515 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain Length = 284 Score = 29.9 bits (64), Expect = 1.7 Identities = 19/62 (30%), Positives = 31/62 (50%) Frame = +3 Query: 81 DKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLKSDLENV 260 DK + D + +EL + N +K +L +E+ K + E K SLKSD+EN+ Sbjct: 40 DKATILTDTVQLLKELTSEVNKLKSEYTALTDESRELTQ--EKNDLREEKTSLKSDIENL 97 Query: 261 EV 266 + Sbjct: 98 NL 99 >At1g27850.1 68414.m03413 expressed protein similar to En/Spm-like transposon protein GB:AAB95292 GI:2088658 from [Arabidopsis thaliana] Length = 1148 Score = 29.9 bits (64), Expect = 1.7 Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Frame = +3 Query: 231 PSLKSDLENVEVPDENEE-IKRPLVDLRNPGPPQHQEHETQNPEHHEDAEK 380 P +S++EN+ PD++EE I +V+L N +H+ HE+ + D ++ Sbjct: 447 PVFQSEVENLAYPDKHEESIAFGMVNLSNES-SRHESHESSFSDQLGDMDQ 496 >At5g54050.1 68418.m06722 DC1 domain-containing protein Length = 580 Score = 29.5 bits (63), Expect = 2.3 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = +3 Query: 228 KPSLKSDLENVEVPDENEEIKRPLVDLRNPGPPQHQEHE 344 K + LE +VP+E EEIK P + G H HE Sbjct: 265 KKEVWDGLELEDVPEEEEEIKDPFKVINEKGDIVHFSHE 303 >At5g29624.1 68418.m03640 DC1 domain-containing protein contains Pfam PF03107: DC1 domain Length = 488 Score = 29.5 bits (63), Expect = 2.3 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = +3 Query: 246 DLENVEVPDENEEIKRPLVDLRNPGPPQHQEHE 344 DLE +VPDE EEIK P + G H HE Sbjct: 261 DLE--DVPDEEEEIKDPFKVINENGDIVHISHE 291 >At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type Length = 504 Score = 29.5 bits (63), Expect = 2.3 Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 7/104 (6%) Frame = +3 Query: 30 VLAARAASIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIK---DIDNSLRANKKEVIDI 200 VL+ R A K +DK +V D + + + D + K + N + + +KE+ D Sbjct: 256 VLSVREALNAKKEAAQKDKSFSVSDTVGNSDDDDDGEDETKFDAKMRNQVLSRRKEIGDT 315 Query: 201 PVKVIVEEIKPSLKSDLENVE----VPDENEEIKRPLVDLRNPG 320 P K ++ SLK E+ + V E+E+ + + L+ G Sbjct: 316 PSKPTQKKKSSSLKGREESTQRSDAVSSEDEKPRMEKLSLKKKG 359 >At4g27595.1 68417.m03964 protein transport protein-related low similarity to SP|P25386 Intracellular protein transport protein USO1 {Saccharomyces cerevisiae} Length = 1212 Score = 29.5 bits (63), Expect = 2.3 Identities = 20/93 (21%), Positives = 45/93 (48%), Gaps = 3/93 (3%) Frame = +3 Query: 150 KDIDNS--LRANKKEVIDIPVKVIVEEIKPSLKSDLENVEVPDENEEIKRPLVDLRNPGP 323 K ++ S L+ + E +D+ +K + E +++L N + ++ E + + R Sbjct: 321 KQVEESKELKTSASESLDLAMKQLEENNHALHEAELGNATLKEKVESLVTTIG--RQEND 378 Query: 324 PQHQEHETQ-NPEHHEDAEKIVSSVKNDINTAE 419 + +H+ + E EK+V S+K+D+ T + Sbjct: 379 LEESQHQVCISKEETSKLEKLVESIKSDLETTQ 411 >At2g28620.1 68415.m03479 kinesin motor protein-related Length = 1076 Score = 29.5 bits (63), Expect = 2.3 Identities = 45/209 (21%), Positives = 89/209 (42%), Gaps = 13/209 (6%) Frame = +3 Query: 117 EQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEE-IKPSLKSDLENVEVPDENEEIKR 293 E E A+ I+ ++ A K++ID+ E+ + L+ L+ E + E ++ Sbjct: 442 EAEKKAMADKIEQMEVEGEAKDKQIIDLQELYNSEQLVTAGLREKLDKTE--KKLYETEQ 499 Query: 294 PLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTA---EIALRQGFQEVSDGIG 464 L+DL +H++ E ++ S K ++ A + L +VS+ Sbjct: 500 ALLDLEE----KHRQAVATIKEKEYLISNLLKSEKTLVDRAVELQAELANAASDVSNLFA 555 Query: 465 KWYARTEQINELQASL-QHFQENFGAQIQKLNETL--------HFIKPADTIAAPSVEET 617 K R ++I + SL Q FQ Q++ LN ++ ++ + + V Sbjct: 556 K-IGRKDKIEDSNRSLIQDFQSQLLRQLELLNNSVAGSVSQQEKQLQDMENVMVSFVS-A 613 Query: 618 QNKASFETIESGLKSLETNFNSGLNQLSE 704 + KA+ ET+ L L+ +N+G+ L + Sbjct: 614 KTKAT-ETLRGSLAQLKEKYNTGIKSLDD 641 >At1g50750.1 68414.m05707 expressed protein Length = 816 Score = 29.5 bits (63), Expect = 2.3 Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 5/114 (4%) Frame = +3 Query: 210 VIVEEIKPSLKSDLENVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVS 389 + VEE PS L + E E E++ + N P HQ+H T+ E + S Sbjct: 653 IAVEE--PSSDEKLCSSEA--EKEDVVADDDTMNNIEPVPHQQHATRGTNRDETSRACKS 708 Query: 390 SV--KNDINTAEIALRQGFQEVSDGI---GKWYARTEQINELQASLQHFQENFG 536 V D + +IA+ +G Q G+ G T + NE L+ + +FG Sbjct: 709 VVLSPTDESNIQIAVGEGSQGQDCGLQDNGLGSDETSKSNEQLEDLEKRKNDFG 762 >At5g42880.1 68418.m05226 hypothetical protein contains Pfam profile PF05701: Plant protein of unknown function (DUF827) Length = 751 Score = 29.1 bits (62), Expect = 3.0 Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 3/106 (2%) Frame = +3 Query: 396 KNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASLQH--FQENFGAQIQKLNETLH 569 KNDI+ A + R+ +EV I K + +++ + SLQ +E + K E+ Sbjct: 411 KNDIHAAVESARRELEEVKANIEKAASEVKKLKIIAGSLQSELGRERQDLEETKQKESTG 470 Query: 570 FIKPADTIAAPSVEETQNKASFETIES-GLKSLETNFNSGLNQLSE 704 + D A + ET K T E+ K+L T L E Sbjct: 471 LARTNDKDAGEELVETAKKLEQATKEAEDAKALATASRDELRMAKE 516 >At1g51070.1 68414.m05741 basic helix-loop-helix (bHLH) family protein similar to bHLH transcription factor GI:3757520 from [Arabidopsis thaliana] Length = 226 Score = 29.1 bits (62), Expect = 3.0 Identities = 19/69 (27%), Positives = 36/69 (52%) Frame = +3 Query: 57 PDKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPS 236 P + P+ DK + D + + D+A +KD+++SL+ KE+ D K + + K Sbjct: 95 PGRTPKT-DKVAIINDAIRMVNQARDEAQKLKDLNSSLQEKIKELKD--EKNELRDEKQK 151 Query: 237 LKSDLENVE 263 LK + E ++ Sbjct: 152 LKVEKERID 160 >At4g16420.3 68417.m02486 transcriptional adaptor (ADA2b) identical to transcriptional adaptor ADA2b [Arabidopsis thaliana] gi|13591700|gb|AAK31320 Length = 486 Score = 28.7 bits (61), Expect = 4.0 Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 1/105 (0%) Frame = +3 Query: 87 PLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDI-PVKVIVEEIKPSLKSDLENVE 263 PL + +++ + QA ID+ N KE P KV VE+ + D Sbjct: 155 PLPDMSHVAGKNRKELQAMAKGRIDDKKEQNMKEEYPFSPPKVKVEDTQKESFVDRSFGG 214 Query: 264 VPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVK 398 + + LV+L N +Q+ E +PE+ DAE++++ ++ Sbjct: 215 KKPVSTSVNNSLVELSN----YNQKREEFDPEYDNDAEQLLAEME 255 >At2g30410.1 68415.m03704 tubulin folding cofactor A (KIESEL) identical to cDNA tubulin folding cofactor A, GI:20514256, SP|O04350 Tubulin-specific chaperone A (Tubulin-folding cofactor A) (CFA) (TCP1-chaperonin cofactor A homolog) {Arabidopsis thaliana} Length = 113 Score = 28.7 bits (61), Expect = 4.0 Identities = 15/52 (28%), Positives = 28/52 (53%) Frame = +3 Query: 264 VPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAE 419 +PD ++ ++ L DL++ + E + PE EDA+K V+ V+ T + Sbjct: 62 IPDCHKRLESALADLKSTLAELEETDEKEGPE-IEDAKKTVADVEKQFPTED 112 >At1g12380.1 68414.m01431 expressed protein Length = 793 Score = 28.7 bits (61), Expect = 4.0 Identities = 17/68 (25%), Positives = 35/68 (51%) Frame = +3 Query: 294 PLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWY 473 PL +R+ + +PE +D +K+++ + + + A IAL + + ++G+ Y Sbjct: 609 PLYLIRDSSGKYLPPFKCLSPEQEKDVDKLITRLVSR-DEAHIALMELMKWRTEGLDPMY 667 Query: 474 ARTEQINE 497 AR Q+ E Sbjct: 668 ARAVQMKE 675 >At1g06230.2 68414.m00659 DNA-binding bromodomain-containing protein contains bromodomain, INTERPRO:IPR001487 Length = 766 Score = 28.7 bits (61), Expect = 4.0 Identities = 19/116 (16%), Positives = 49/116 (42%) Frame = +3 Query: 75 AEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLKSDLE 254 A +KP +++N + ++ + ++ + K + + + K ++ E Sbjct: 43 AIEKPEGLLENENDNNDVSPAETLAPEFEDPIVVVKNSIEEAALGTNSHGDKNLTEAPSE 102 Query: 255 NVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEI 422 N+ D ++ I +PLV+ + PQ + + E+ + ++D+NT + Sbjct: 103 NLPGDDSDKVIDKPLVEAFSQAQPQ-DDASLAAMDKSEEVPSQIPKAQDDVNTVVV 157 >At1g06230.1 68414.m00658 DNA-binding bromodomain-containing protein contains bromodomain, INTERPRO:IPR001487 Length = 766 Score = 28.7 bits (61), Expect = 4.0 Identities = 19/116 (16%), Positives = 49/116 (42%) Frame = +3 Query: 75 AEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLKSDLE 254 A +KP +++N + ++ + ++ + K + + + K ++ E Sbjct: 43 AIEKPEGLLENENDNNDVSPAETLAPEFEDPIVVVKNSIEEAALGTNSHGDKNLTEAPSE 102 Query: 255 NVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEI 422 N+ D ++ I +PLV+ + PQ + + E+ + ++D+NT + Sbjct: 103 NLPGDDSDKVIDKPLVEAFSQAQPQ-DDASLAAMDKSEEVPSQIPKAQDDVNTVVV 157 >At5g35604.1 68418.m04242 hypothetical protein Length = 298 Score = 28.3 bits (60), Expect = 5.2 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = +1 Query: 31 CSPHAQPPSRTRSPRPKI 84 CSP PPSRT P P + Sbjct: 92 CSPRLSPPSRTMGPPPPV 109 >At3g04010.1 68416.m00422 glycosyl hydrolase family 17 protein similar to beta-1,3-glucanase GB:S12402 [Nicotiana sp], GB:CAA03908 [Citrus sinensis], GB:S44364 [Lycopersicon esculentum] Length = 491 Score = 28.3 bits (60), Expect = 5.2 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = -1 Query: 521 EMLQAGLELVNLLGTS-VPFSNTV*HFLEALTKSDFRCVNVIFDGRN 384 +++Q ++VN L + PF+ + FL SDF FDG+N Sbjct: 189 DIIQEMTQIVNFLAQNKAPFTVNIYPFLSLYLSSDFPFEYAFFDGQN 235 >At2g36740.1 68415.m04507 YL1 nuclear family protein similar to YL-1 protein (Transcription factor-like 1) (Swiss-Prot:Q15906) [Homo sapiens] Length = 379 Score = 28.3 bits (60), Expect = 5.2 Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 4/104 (3%) Frame = +3 Query: 162 NSLRANKKEVIDIPVKVIVEEIKPSLKSDLENVEVPDENEEI---KRPLVDLRNPGPPQH 332 +++ N+KE+ D+P K ++ K + K + +V + E I ++P +L N + Sbjct: 89 DAVAVNEKELRDLPKKRLIYPGKTASKKKKKKTKVVSQLEYIPGDEKPGEELGNKEQEEK 148 Query: 333 QEHETQNPEHHEDAEKIVSSVKNDINTAE-IALRQGFQEVSDGI 461 +E+E Q E + + + AE ALR Q + I Sbjct: 149 EENEAQEDMEGEKVIRKSTRTSVVVRQAERDALRAAIQATTKPI 192 >At1g23710.1 68414.m02993 expressed protein Length = 295 Score = 28.3 bits (60), Expect = 5.2 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +3 Query: 201 PVKVIVEEIKPSLKSDLENVEVPDENEEIKR 293 PVK I +E + D + P+E+EEIK+ Sbjct: 10 PVKCIADERLTEISMDFTKLGFPEEDEEIKK 40 >At1g04730.1 68414.m00469 AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family ('A'TPases 'A'ssociated with diverse cellular 'A'ctivities) Length = 954 Score = 28.3 bits (60), Expect = 5.2 Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Frame = +3 Query: 78 EDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSL-KSDLE 254 E + L+VV S + + I +ID +L + K +D+ +K+++ E K + K ++E Sbjct: 388 ETRILDVVQMNSVTADSRPKCLVIDEIDGAL-GDGKGAVDVILKMVLAERKHATGKENVE 446 Query: 255 NVEVPDENEEIKRPL 299 NV+ + + PL Sbjct: 447 NVKTSSKKDRRTAPL 461 >At5g66150.1 68418.m08333 glycosyl hydrolase family 38 protein similar to lysosomal alpha-mannosidase SP:O09159 from [Mus musculus] Length = 1047 Score = 27.9 bits (59), Expect = 6.9 Identities = 18/56 (32%), Positives = 29/56 (51%) Frame = +3 Query: 111 SSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLKSDLENVEVPDEN 278 S+E+ L Q + I NSL N+ E+I IPV ++ S + L+ +P +N Sbjct: 486 STEETLPGQKSLILVAYNSLGWNRTEIIRIPVNDAGLSVEDSSGNTLDAQYIPMDN 541 >At5g41020.1 68418.m04986 myb family transcription factor contains Pfam profile: PF00249 Myb DNA binding domain Length = 588 Score = 27.9 bits (59), Expect = 6.9 Identities = 20/67 (29%), Positives = 34/67 (50%) Frame = +3 Query: 93 NVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLKSDLENVEVPD 272 +V++N S + + K D L A +E ID VK + KPS+ SD+E++ + Sbjct: 149 DVIENTESSKVSDKKKGKRKRDDTDLGA--EENIDKEVKRKNNKKKPSVDSDVEDINLDS 206 Query: 273 ENEEIKR 293 N+ K+ Sbjct: 207 TNDGKKK 213 >At5g01220.1 68418.m00027 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase / sulfolipid synthase (SQD2) identical to GI:20302857 Length = 510 Score = 27.9 bits (59), Expect = 6.9 Identities = 12/40 (30%), Positives = 22/40 (55%) Frame = +3 Query: 30 VLAARAASIPDKVPEAEDKPLNVVDNLSSEQELIDQANTI 149 V+AARA IPD +PE ++ + N ++ + + T+ Sbjct: 403 VVAARAGGIPDIIPEDQEGKTGFLFNPGDVEDCVTKLRTL 442 >At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial, putative / HSP70, mitochondrial, putative strong similarity to SP|Q01899 Heat shock 70 kDa protein, mitochondrial precursor {Phaseolus vulgaris} Length = 682 Score = 27.9 bits (59), Expect = 6.9 Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 2/86 (2%) Frame = +3 Query: 249 LENVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIAL 428 ++ E+ + ++ K+ L+DLRN E E+ EKI + + ++I TA L Sbjct: 560 VKEAELNAQKDQEKKQLIDLRNSADTTIYSVEKSLSEYR---EKIPAEIASEIETAVSDL 616 Query: 429 RQGF--QEVSDGIGKWYARTEQINEL 500 R ++V D K A + ++++ Sbjct: 617 RTAMAGEDVEDIKAKVEAANKAVSKI 642 >At4g03430.1 68417.m00470 pre-mRNA splicing factor-related similar to pre-mRNA splicing factor pre-mRNA splicing factor prp1 (SP:Q12381) [Fission yeast] Length = 1029 Score = 27.9 bits (59), Expect = 6.9 Identities = 11/42 (26%), Positives = 21/42 (50%) Frame = +3 Query: 387 SSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASL 512 + +++D+ LR+G + + D + W A E NE A + Sbjct: 458 AKLEHDVENKSRVLRKGLEHIPDSVRLWKAVVELANEEDARI 499 >At3g54670.1 68416.m06049 structural maintenance of chromosomes (SMC) family protein similar to SMC1 protein [Bos taurus] GI:4235253, 14S cohesin SMC1 subunit (SMC protein) [Xenopus laevis] GI:3328231; contains Pfam profiles PF02483: SMC family C-terminal domain, PF02463: RecF/RecN/SMC N terminal domain Length = 1257 Score = 27.9 bits (59), Expect = 6.9 Identities = 25/124 (20%), Positives = 53/124 (42%), Gaps = 7/124 (5%) Frame = +3 Query: 51 SIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKDID------NSLRANKKEVIDIPVKV 212 SI DK+P+ E + N+++ + + + +A ++D N L E++D K Sbjct: 746 SIKDKLPQLEQEERNIIEEIDRIKPELSKAIARTEVDKRKTEMNKLEKRMNEIVDRIYKD 805 Query: 213 IVEEI-KPSLKSDLENVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVS 389 + + P+++ E ++ +E + L ++Q QN + KI S Sbjct: 806 FSQSVGVPNIRV-YEETQLKTAEKEAEERLELSNQLAKLKYQLEYEQNRDVGSRIRKIES 864 Query: 390 SVKN 401 S+ + Sbjct: 865 SISS 868 >At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profile: PF00076 RNA recognition motif Length = 636 Score = 27.9 bits (59), Expect = 6.9 Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 2/85 (2%) Frame = +3 Query: 150 KDIDNSL-RANKKEVIDIPVKVIVEEIKP-SLKSDLENVEVPDENEEIKRPLVDLRNPGP 323 +D+D + + KKE+ID+ K E+ P ++S + DE E+ K L++ Sbjct: 31 EDLDMQVTKKQKKELIDVVQKEKAEKTVPKKVESSSSDASDSDEEEKTKETPSKLKDESS 90 Query: 324 PQHQEHETQNPEHHEDAEKIVSSVK 398 + +E ++ + E A+K +K Sbjct: 91 SE-EEDDSSSDEEIAPAKKRPEPIK 114 >At5g54030.1 68418.m06720 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain Length = 419 Score = 27.5 bits (58), Expect = 9.2 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +3 Query: 249 LENVEVPDENEEIKRPLVDLRNPGPPQHQEHE 344 LE +VP+E EEI+ P + + G H HE Sbjct: 250 LELEDVPEEEEEIEDPFKVINDKGDIIHFSHE 281 >At3g01460.1 68416.m00070 PHD finger family protein / methyl-CpG binding domain-containing protein contains Pfam profiles PF00628: PHD-finger (2 copies), PF01429: Methyl-CpG binding domain Length = 2176 Score = 27.5 bits (58), Expect = 9.2 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = +3 Query: 228 KPSLKSDLENVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHED-AEKIVSSVKND 404 K SLKSD NV+ + + V + G ++QE E+ +P H E+ K V+ N Sbjct: 1847 KESLKSDYLNVKSSAGKDVAEISNVSELDSGLIRYQEEESISPYHFEEICSKFVTKDCNR 1906 Query: 405 INTAEIAL 428 EI L Sbjct: 1907 DLVKEIGL 1914 >At1g34480.1 68414.m04285 DC1 domain-containing protein contains Pfam protein PF03107 DC1 domain Length = 602 Score = 27.5 bits (58), Expect = 9.2 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -1 Query: 674 ICL*RLETRFDCFKRSFILRF 612 IC R +TRFDC K F+L F Sbjct: 445 ICKVRSQTRFDCGKCDFVLCF 465 >At1g11670.1 68414.m01340 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family; EST gb|W43487 comes from this gene Length = 503 Score = 27.5 bits (58), Expect = 9.2 Identities = 19/49 (38%), Positives = 25/49 (51%) Frame = -2 Query: 202 GMSMTSFLFARRLLSMSLMVLAWSMSSCSLDKLSTTFKGLSSASGTLSG 56 GMSM + +FA RL SM L + S ++ L G+ SA TL G Sbjct: 70 GMSMLTRIFAGRLGSMQLAAASLGNSGFNMFTLGLML-GMGSAVETLCG 117 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,090,558 Number of Sequences: 28952 Number of extensions: 260441 Number of successful extensions: 1215 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 1141 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1212 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1516419560 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -