Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0680
         (730 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    26   0.27 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    24   1.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.4  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   5.8  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   5.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.8  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    22   5.8  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    22   5.8  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   5.8  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   7.7  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +3

Query: 237 LLSNSIEQFERTTPGTSMPSLEPVPLTVDTRPTSKLNIMIKTSPKSPP 380
           +LSN   + E     +++ S  P+P T  T   + L     T P + P
Sbjct: 138 ILSNRFGENEEADAASNVISSTPLPPTTSTTTRTTLTTKFTTKPSTKP 185


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 474 TLSRRGQALRVQHCKDQLVGTQIFCAV 394
           TLS+  Q + +Q C   +V  Q FC V
Sbjct: 172 TLSKMSQVMLIQFCAFVVVLKQKFCVV 198


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 5/18 (27%), Positives = 13/18 (72%)
 Frame = -3

Query: 533 ILWTFFDLFHESLFR*CT 480
           ++WT ++++H ++   CT
Sbjct: 244 LIWTIYEMYHLAILWSCT 261


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -2

Query: 327 SYLQSTGPALRKACLCRELSFQIVQCCL 244
           S L+S  PA R +CL    S  +   CL
Sbjct: 226 SALESPNPASRSSCLGSNTSSMLSLNCL 253


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/34 (23%), Positives = 19/34 (55%)
 Frame = +3

Query: 522 SPQNNLSISSRPFVKNEPLHSPAVRDRDRHREYD 623
           +P++     ++P+V+N  + +  V    R R+Y+
Sbjct: 318 NPEHTTVNEAQPYVRNTTVPTQGVARMSRGRQYN 351


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 15/68 (22%), Positives = 29/68 (42%)
 Frame = -2

Query: 720 LLCHDSFFFFFH*TNLDLYAYAFLFYSRIGLVYRIPCVYLCLSQQDCVKVHS*RTDGKIW 541
           LLC +  F F   TNL +     +F S    V +   ++  L   D    +  + + K+ 
Sbjct: 75  LLCTEKIFLFAIYTNLSILTTVTIFKSAFWDVDKWRTLFTNLQYIDINLQNKGKKESKLM 134

Query: 540 TDYFVDFL 517
            +++  F+
Sbjct: 135 KNFYFWFV 142


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -2

Query: 327 SYLQSTGPALRKACLCRELSFQIVQCCL 244
           S L+S  PA R +CL    S  +   CL
Sbjct: 15  SALESPNPASRSSCLGSNTSSMLSLNCL 42


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -2

Query: 327 SYLQSTGPALRKACLCRELSFQIVQCCL 244
           S L+S  PA R +CL    S  +   CL
Sbjct: 15  SALESPNPASRSSCLGSNTSSMLSLNCL 42


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/34 (23%), Positives = 19/34 (55%)
 Frame = +3

Query: 522 SPQNNLSISSRPFVKNEPLHSPAVRDRDRHREYD 623
           +P++     ++P+V+N  + +  V    R R+Y+
Sbjct: 266 NPEHTTVNEAQPYVRNTTVPTQGVARMSRGRQYN 299


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +3

Query: 357 KTSPKSPPRTEAEPHRRFEFPPADPCNAEP 446
           +T P     T   PH  +   P  P N+EP
Sbjct: 84  QTQPARFYSTPIVPHFAYNHNPLTPPNSEP 113


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,124
Number of Sequences: 336
Number of extensions: 3468
Number of successful extensions: 24
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)