Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0680
(730 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24733| Best HMM Match : Shugoshin_C (HMM E-Value=4.2) 37 0.019
SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8) 33 0.24
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 32 0.41
SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41) 31 0.96
SB_24117| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_11512| Best HMM Match : E-MAP-115 (HMM E-Value=1.4) 30 1.7
SB_37674| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_29635| Best HMM Match : E-MAP-115 (HMM E-Value=1.2) 30 1.7
SB_8334| Best HMM Match : MIB_HERC2 (HMM E-Value=0) 30 1.7
SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_9024| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_105| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_48388| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_37086| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_22224| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_9755| Best HMM Match : Sushi (HMM E-Value=0) 28 8.9
SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0) 28 8.9
SB_41711| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_40655| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036) 28 8.9
SB_9147| Best HMM Match : Sushi (HMM E-Value=0) 28 8.9
>SB_24733| Best HMM Match : Shugoshin_C (HMM E-Value=4.2)
Length = 689
Score = 36.7 bits (81), Expect = 0.019
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Frame = +3
Query: 30 ESSSEGLTNSVMVGAVEKAIDAIERDDTMDNLSSGGSTNELVIDTARATPVPQVTPQSAR 209
ES GL N +V K D IE +DN+ +G S NE ++ +P+V S R
Sbjct: 514 ESRVSGLENVAF--SVSKEADDIELRP-LDNVPNG-SENETERVPGNSSQLPEVA--SKR 567
Query: 210 PPV-DLSGLELLSNSIEQFERTTPGTSMPSLEPVPLTVDTRPTSKLN 347
P + D+ G + NS + + PG S+ +++ +P PTS ++
Sbjct: 568 PEILDIEGAKNPGNSRFNVKPSAPGESVVTVQRLPRRFQVSPTSPVS 614
>SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8)
Length = 361
Score = 33.1 bits (72), Expect = 0.24
Identities = 24/79 (30%), Positives = 33/79 (41%)
Frame = +3
Query: 219 DLSGLELLSNSIEQFERTTPGTSMPSLEPVPLTVDTRPTSKLNIMIKTSPKSPPRTEAEP 398
DL G L SN + T+P + P+ P + T+PT+ T P SPP A
Sbjct: 7 DLFGSSLRSNKTPS-KATSPKPTAPATRPT--STSTKPTTA-----STKPTSPPSQAART 58
Query: 399 HRRFEFPPADPCNAEPAKP 455
E P P ++ A P
Sbjct: 59 RNTAEKPEEKPASSGAASP 77
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 32.3 bits (70), Expect = 0.41
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
Frame = +3
Query: 78 EKAIDAIERDDTMDNLSSGGSTNELVIDTARATPVPQVTPQSARPPVDLSGLELLSNSIE 257
EK +D D DN N + P+ P+ ++ E N E
Sbjct: 255 EKKLDDKSEDKPEDNADEKPEDNPEDKPEDKTEDRPEDKPEDK---LEDKPKENQQNKPE 311
Query: 258 QFERTTPGTSMPSLEPVPLTVDTRPTSKLNIM--IKTSPKSPPRT 386
++TTP TS + + L + + K ++ +KTSPK+ P+T
Sbjct: 312 DKQQTTPKTSRKTSQKTSLNASRKTSRKTSLKRSLKTSPKTSPKT 356
Score = 28.3 bits (60), Expect = 6.7
Identities = 27/125 (21%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Frame = +3
Query: 240 LSNSIEQFERTTPGTSM-PSLEPVPLT-VDTRPTSKLNIMIKTSPKSPPRTEAEPHRRFE 413
L S++ +T+ TS SL+ P T ++T ++LN KTSP++ P + R+
Sbjct: 169 LKTSLKTSMKTSLKTSRRTSLKTCPKTSLETSMKTRLNTSQKTSPETSPEISPKTGRKTS 228
Query: 414 FPPADPCNAEPAKPXXXXXXXXXXXXEQRFMEEVEESPQNNLSISSRPFVKNEPLHSPAV 593
+ + + E++ ++ E+ P++N +P ++ P P
Sbjct: 229 RKTSRKTSLNRSLTTNKPEDNADEKPEKKLDDKSEDKPEDN--ADEKP--EDNPEDKPED 284
Query: 594 RDRDR 608
+ DR
Sbjct: 285 KTEDR 289
>SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41)
Length = 1093
Score = 31.1 bits (67), Expect = 0.96
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +3
Query: 255 EQFERTTPGTSMPSLEPVPLTVDTRPTSKLNIMIKTSPKSPPRTEAEPHRRFEFPPADPC 434
++ R+T S+ SL+PV + + TS + + P+ A P+ RFE P
Sbjct: 129 QRIPRSTASLSVSSLKPVDKQISKQATSTATVPLSGDEVQIPKIPAIPYPRFE-QCGQPS 187
Query: 435 NAEP 446
A+P
Sbjct: 188 PAKP 191
>SB_24117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1276
Score = 30.3 bits (65), Expect = 1.7
Identities = 25/100 (25%), Positives = 42/100 (42%)
Frame = +3
Query: 78 EKAIDAIERDDTMDNLSSGGSTNELVIDTARATPVPQVTPQSARPPVDLSGLELLSNSIE 257
EK D I+ + N+ G S +V A P+ ++ S P+ L +SN+
Sbjct: 805 EKKSDIIDPFQYLHNMPEGASMQPIV-----ARPLASLSGASHSSPLILFKNSQISNAAA 859
Query: 258 QFERTTPGTSMPSLEPVPLTVDTRPTSKLNIMIKTSPKSP 377
+ + P + +P TV+TR L I I+ + P
Sbjct: 860 MKKNSIPKPKKGEIRLLPHTVETRGLLLLTITIEPNMFKP 899
>SB_11512| Best HMM Match : E-MAP-115 (HMM E-Value=1.4)
Length = 639
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 117 DNLSSGGSTNELVIDTARATPVPQVTPQSARPPVD 221
D ++ GS E +DT + TP+ TP+SARPP D
Sbjct: 548 DEITIKGSDAETAVDTLQ-TPI--ATPRSARPPSD 579
>SB_37674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 30.3 bits (65), Expect = 1.7
Identities = 37/166 (22%), Positives = 57/166 (34%), Gaps = 1/166 (0%)
Frame = +3
Query: 18 DSAEESSSEGLTNSVMVGAVEKAIDAIERDDTMDNLSSGGSTNELVIDTARATPVPQVTP 197
++A S E + S G A + +D + S + E V T +T T
Sbjct: 423 ENANGGSDEAKSTSSNSGNTPAPKPAPDAEDKPKSSSGTSTPKEGVPKTIGSTTAADTTA 482
Query: 198 QSARPPVDLSGLELLSNSIEQFERTTPGTSMPSLEPVPL-TVDTRPTSKLNIMIKTSPKS 374
Q A P D++ + + + E P + EP + T + P + + IK
Sbjct: 483 Q-ASPAQDVNR----KSPVSEAEAPKPSAAKEEAEPEQMDTSEPEPAKEPSSEIKPEASK 537
Query: 375 PPRTEAEPHRRFEFPPADPCNAEPAKPXXXXXXXXXXXXEQRFMEE 512
P + E P + EPAKP E MEE
Sbjct: 538 PETAKPEA--------TSPTDGEPAKPEPAEESSAKPSEEAEIMEE 575
>SB_29635| Best HMM Match : E-MAP-115 (HMM E-Value=1.2)
Length = 2658
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 117 DNLSSGGSTNELVIDTARATPVPQVTPQSARPPVD 221
D ++ GS E +DT + TP+ TP+SARPP D
Sbjct: 2567 DEITIKGSDAETAVDTLQ-TPI--ATPRSARPPSD 2598
>SB_8334| Best HMM Match : MIB_HERC2 (HMM E-Value=0)
Length = 636
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +3
Query: 129 SGGSTNELVIDTARATPVPQVTPQSARPPVDLSGLEL---LSNSI-EQFERTTPGTSMPS 296
+ S+++L+ + P P VTP+ AR + L+L SN+ E +T P + S
Sbjct: 367 TSSSSDQLIEHSVAGRPSPSVTPEVAREDCTQASLQLEERPSNTDGEGSGQTLPNEQLSS 426
Query: 297 LEPVPLTVDTRPTS 338
L + DT+PTS
Sbjct: 427 LH-ISQEDDTKPTS 439
>SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1107
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +3
Query: 270 TTPGTSMPSLEPVPLTVDTRPTSKLNIMIKTSPKSPPRTEAEPHRRFEFPPADP 431
T PGT+ +P+P T P + T P +PP TE PP DP
Sbjct: 1007 TNPGTTTNVPDPLPTDPPTEPPTDPPTPPPTEPPTPPPTEPPTP-----PPTDP 1055
Score = 29.1 bits (62), Expect = 3.9
Identities = 23/107 (21%), Positives = 44/107 (41%), Gaps = 3/107 (2%)
Frame = +3
Query: 144 NELVIDTARATPVPQVT-PQSARPPVDLSGLELLSNSIEQFERTTPGTSMPSLEPVPLTV 320
++ V+ + T V Q+ P + +P + G + + + Q + + +E +P +
Sbjct: 946 SKCVVQNDKPTCVCQLNCPNTGQPVLASDGAQYDNECLMQLNACSANKDITVVEFLPTSG 1005
Query: 321 DTRPTSKLNI--MIKTSPKSPPRTEAEPHRRFEFPPADPCNAEPAKP 455
T P + N+ + T P + P T+ E PP P P P
Sbjct: 1006 PTNPGTTTNVPDPLPTDPPTEPPTDPPTPPPTE-PPTPPPTEPPTPP 1051
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 29.5 bits (63), Expect = 2.9
Identities = 33/116 (28%), Positives = 42/116 (36%), Gaps = 7/116 (6%)
Frame = +3
Query: 129 SGGSTNELVIDTARATPVPQVTPQSARPPVDLSG--LELLSNSIEQFERTTPGTSMPSLE 302
S GST L + AT P + S +PP +G NSI E T T S
Sbjct: 138 SSGST--LPTSSTPATQNPTDSSLSTKPPTKKTGETQSPTENSISTEESATTPTPSGSTS 195
Query: 303 PV-PLTVD----TRPTSKLNIMIKTSPKSPPRTEAEPHRRFEFPPADPCNAEPAKP 455
P P TRP I +T P PP + + E P + + P P
Sbjct: 196 PTSPNNASPQSSTRPGETTAIPKQTGPTQPPGSTKITTPQHETKPGETTVSTPKAP 251
>SB_9024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -1
Query: 391 ASVLGGDFGEVLIMMLSFDVG-LVSTVNGTGSKEGMLVPGVVLSNCSMLFERSSNPLRST 215
A + G + V ++ + D G LVS +NGT + P ++ C F +P R+
Sbjct: 192 ACLSNGSWSGVSVICKAHDCGPLVSPLNGTKTGSLTTFPNIITFKCDPGFNLIGSPKRTC 251
Query: 214 GGLALW 197
A W
Sbjct: 252 QSNARW 257
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 29.1 bits (62), Expect = 3.9
Identities = 25/112 (22%), Positives = 40/112 (35%), Gaps = 3/112 (2%)
Frame = +3
Query: 129 SGGSTNELVIDTARATPVPQVTPQSARPPVDLSGLELLSNSIEQFERTTPGTSMPSLEPV 308
S S ++ V DT +A +P + ++ P+ + + +P L+P
Sbjct: 961 SKDSESKTVPDTVKAESMPVPASRQSKAPIPHPSPPMQPAKPPRQHTQCSIDPVPHLKPP 1020
Query: 309 PLTVDTRPTSKLNIMIKTSPKSPPRTEAEPHRRFEFPP---ADPCNAEPAKP 455
T P + P PPR + P PP P +EPA P
Sbjct: 1021 GPTEQPVPPKRKASPPSAQPLPPPRKPSPPPSAVPIPPPRKPSPPPSEPAPP 1072
>SB_105| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2982
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/75 (28%), Positives = 30/75 (40%)
Frame = +3
Query: 135 GSTNELVIDTARATPVPQVTPQSARPPVDLSGLELLSNSIEQFERTTPGTSMPSLEPVPL 314
G+ N+ V T VP TP + P +G L+ TTP S+P P+
Sbjct: 2042 GAVNKQVPLTTHTGSVPSTTPIGSVPVTAPTGSVALTAPNGSVALTTPIGSVPLTAPIGK 2101
Query: 315 TVDTRPTSKLNIMIK 359
+ T K I +K
Sbjct: 2102 EIKTVGKMKNKITVK 2116
>SB_48388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 283
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = -1
Query: 454 GFAGSALQGSAGGNSNLLCGSASVLGGDF----GEVLIMMLS 341
G GS GSAGG + GSA D G+V+I MLS
Sbjct: 242 GIEGSETTGSAGGGGSFNSGSAQESEADVNEGDGKVIITMLS 283
>SB_37086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 28.3 bits (60), Expect = 6.7
Identities = 23/88 (26%), Positives = 40/88 (45%)
Frame = +3
Query: 114 MDNLSSGGSTNELVIDTARATPVPQVTPQSARPPVDLSGLELLSNSIEQFERTTPGTSMP 293
M N SSGGST + +I T VP+ P P +S + ++ T P T +P
Sbjct: 291 MINSSSGGSTVQFLI--PEGTAVPKNVPIFI-PNFVVSSTASGTTPVQMSSMTLPTTGIP 347
Query: 294 SLEPVPLTVDTRPTSKLNIMIKTSPKSP 377
++ + +++ + I K + +SP
Sbjct: 348 AIPTSTIHINSGLVTSPIIASKVAGESP 375
>SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1240
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/69 (28%), Positives = 27/69 (39%), Gaps = 3/69 (4%)
Frame = +3
Query: 162 TARATPVPQVTPQSARPPVDLSGLELLSNSIEQF---ERTTPGTSMPSLEPVPLTVDTRP 332
T A P T +S P + + L S E + T P T PS+ P P
Sbjct: 828 TTEANTPPVQTTESYNTPTETTALPYQETSTESSTTAQPTQPPTFAPSIAPTQPPTPKPP 887
Query: 333 TSKLNIMIK 359
T++ N IK
Sbjct: 888 TTEPNFDIK 896
>SB_22224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1106
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/64 (26%), Positives = 38/64 (59%)
Frame = +1
Query: 523 VHKIICPYLPVRSLRMNLYTVLL*ETEIDTGNTIYKPNPRVKKKSIGIEIEIRLVKEEEK 702
++K++ PY+ RSLR Y +L+ E +D N++ P +K++ + ++++ V+
Sbjct: 228 LNKLLTPYVLRRSLRFEKYALLV-EPRLDDCNSLL---PGLKQEHV---LKLQSVQNSAA 280
Query: 703 RVMT 714
R++T
Sbjct: 281 RILT 284
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 27.9 bits (59), Expect = 8.9
Identities = 22/75 (29%), Positives = 29/75 (38%)
Frame = +3
Query: 174 TPVPQVTPQSARPPVDLSGLELLSNSIEQFERTTPGTSMPSLEPVPLTVDTRPTSKLNIM 353
TP TP + P+ S L S R+TP T P L++ + P S N
Sbjct: 167 TPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTP-SMPNTP 225
Query: 354 IKTSPKSPPRTEAEP 398
S S P T + P
Sbjct: 226 STPSTPSTPSTLSTP 240
Score = 27.9 bits (59), Expect = 8.9
Identities = 22/75 (29%), Positives = 29/75 (38%)
Frame = +3
Query: 174 TPVPQVTPQSARPPVDLSGLELLSNSIEQFERTTPGTSMPSLEPVPLTVDTRPTSKLNIM 353
TP TP + P+ S L S R+TP T P L++ + P S N
Sbjct: 717 TPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTP-SMPNTP 775
Query: 354 IKTSPKSPPRTEAEP 398
S S P T + P
Sbjct: 776 STPSTPSTPSTLSTP 790
>SB_9755| Best HMM Match : Sushi (HMM E-Value=0)
Length = 1351
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -1
Query: 337 DVGLVST-VNGTGSKEGMLVPGVVLSNCSMLFERSSNPLRSTGGLALWGVTCGTGVALAV 161
D G + T +NG+ + + P + +C F+ +P+RS W T + +++
Sbjct: 838 DCGPLETPLNGSSAGNLTVFPNTIAFSCDEGFDLFGSPVRSCTSRGAWSGTVTSCNGMSL 897
Query: 160 SITSSLV 140
S+ S+ +
Sbjct: 898 SLVSNSI 904
>SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0)
Length = 942
Score = 27.9 bits (59), Expect = 8.9
Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 2/94 (2%)
Frame = +3
Query: 156 IDTARATPVPQVTP-QSARPPVDLSGLELLSNSIEQFERTTPG-TSMPSLEPVPLTVDTR 329
++T Q+TP SA PP L GL+ + +R+TP SM +L
Sbjct: 245 VNTPPNAQAQQMTPPSSAAPPQSLPGLQTSPSLQPPSQRSTPSPQSMSALHSGKPKRPGM 304
Query: 330 PTSKLNIMIKTSPKSPPRTEAEPHRRFEFPPADP 431
P S ++ ++ P PP P P P
Sbjct: 305 PPSP-SVPHQSQPAVPPAFATPPRSGASTPSGAP 337
>SB_41711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1662
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +3
Query: 177 PVPQVTPQSARPPVDLSG--LELLSNSIEQFERTTP 278
PV ++TP S PP +S +LLS E F R P
Sbjct: 654 PVKKITPVSTEPPTKISSERRQLLSQLEENFFRIQP 689
>SB_40655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1074
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 628 KPNPRVKKKSIGIEIEIRLVKEEEK 702
KPNP+V+++ I +E R + +E+K
Sbjct: 25 KPNPQVRQRKISLEERHRKISKEDK 49
>SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036)
Length = 362
Score = 27.9 bits (59), Expect = 8.9
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +3
Query: 138 STNELVIDTARATPVPQVTPQSARPPVDLSGLELLSNSIEQFERTTPGTSMPSLEPVPL- 314
+T L++ T P P + + P+ + L + F TT M + P+P
Sbjct: 90 TTTPLLMVTTSPLPSPTIPFLATTTPLLMVTTSPLPSPTIPFLATTAPLLMVTTSPLPPP 149
Query: 315 TVDTRPTSKLNIMIKTSPKSPP 380
T+ T+ +M+ TSP PP
Sbjct: 150 TIPFLATTTPLLMVTTSPLPPP 171
>SB_9147| Best HMM Match : Sushi (HMM E-Value=0)
Length = 1656
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -1
Query: 337 DVGLVST-VNGTGSKEGMLVPGVVLSNCSMLFERSSNPLRSTGGLALWGVTCGTGVALAV 161
D G + T +NG+ + + P + +C F+ +P+RS W T + +++
Sbjct: 385 DCGPLETPLNGSSAGNLTVFPNTIAFSCDEGFDLFGSPVRSCTSRGAWSGTVTSCNGMSL 444
Query: 160 SITSSLV 140
S+ S+ +
Sbjct: 445 SLVSNSI 451
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,460,736
Number of Sequences: 59808
Number of extensions: 449382
Number of successful extensions: 1651
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1636
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1949964354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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