Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0680
(730 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 36 0.036
At1g23540.1 68414.m02960 protein kinase family protein contains ... 35 0.048
At4g00890.1 68417.m00120 proline-rich family protein contains pr... 34 0.11
At3g03300.1 68416.m00327 DEAD/DEAH box helicase carpel factory-r... 33 0.19
At4g16280.3 68417.m02471 flowering time control protein / FCA ga... 33 0.26
At4g16280.2 68417.m02470 flowering time control protein / FCA ga... 33 0.26
At4g16280.1 68417.m02469 flowering time control protein / FCA ga... 33 0.26
At3g24540.1 68416.m03082 protein kinase family protein contains ... 32 0.34
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 31 0.78
At4g32010.1 68417.m04557 transcriptional factor B3 family protei... 31 0.78
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 31 0.78
At1g20750.1 68414.m02599 helicase-related similar to BRCA1-bindi... 31 0.78
At3g60920.1 68416.m06815 beige/BEACH domain-containing protein c... 30 1.4
At1g26150.1 68414.m03192 protein kinase family protein similar t... 30 1.4
At3g07100.1 68416.m00845 protein transport protein Sec24, putati... 30 1.8
At2g46420.1 68415.m05777 expressed protein 30 1.8
At1g61080.1 68414.m06877 proline-rich family protein 30 1.8
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 29 2.4
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 29 2.4
At3g28110.1 68416.m03508 hypothetical protein 29 2.4
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 29 2.4
At2g22680.1 68415.m02688 zinc finger (C3HC4-type RING finger) fa... 29 2.4
At4g34440.1 68417.m04894 protein kinase family protein contains ... 29 3.2
At4g16980.1 68417.m02560 arabinogalactan-protein family similar ... 29 3.2
At2g39530.1 68415.m04850 integral membrane protein, putative con... 29 4.2
At2g27380.1 68415.m03302 proline-rich family protein contains pr... 29 4.2
At1g67290.1 68414.m07658 glyoxal oxidase-related contains simila... 29 4.2
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 28 5.5
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 28 5.5
At2g47030.1 68415.m05876 pectinesterase family protein contains ... 28 5.5
At1g64830.1 68414.m07350 aspartyl protease family protein contai... 28 5.5
At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-relate... 28 5.5
At1g02640.1 68414.m00214 glycosyl hydrolase family 3 protein sim... 28 5.5
At5g55020.1 68418.m06853 myb family transcription factor (MYB120... 28 7.3
At1g70460.1 68414.m08107 protein kinase, putative contains Pfam ... 28 7.3
At1g16710.1 68414.m02003 TAZ zinc finger family protein / zinc f... 28 7.3
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 28 7.3
At5g66050.1 68418.m08319 expressed protein 27 9.6
At5g45275.1 68418.m05557 expressed protein Requires functional a... 27 9.6
At4g30260.1 68417.m04302 integral membrane Yip1 family protein c... 27 9.6
At3g56860.3 68416.m06325 UBP1 interacting protein 2a (UBA2a) ide... 27 9.6
At3g56860.2 68416.m06324 UBP1 interacting protein 2a (UBA2a) ide... 27 9.6
At3g56860.1 68416.m06323 UBP1 interacting protein 2a (UBA2a) ide... 27 9.6
At2g33290.1 68415.m04080 SET domain-containing protein (SUVH2) i... 27 9.6
At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearl... 27 9.6
At1g13470.1 68414.m01578 expressed protein 27 9.6
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 35.5 bits (78), Expect = 0.036
Identities = 27/93 (29%), Positives = 37/93 (39%)
Frame = +3
Query: 174 TPVPQVTPQSARPPVDLSGLELLSNSIEQFERTTPGTSMPSLEPVPLTVDTRPTSKLNIM 353
TP P VTP S PP + + +P S P++ P P++ PTS
Sbjct: 72 TPPPAVTPTS--PPAPKVAPVISPATPPPQPPQSPPASAPTVSPPPVSPPPAPTSP---- 125
Query: 354 IKTSPKSPPRTEAEPHRRFEFPPADPCNAEPAK 452
+P SPP A P PP P + P +
Sbjct: 126 -PPTPASPPPAPASPPPAPASPPPAPVSPPPVQ 157
>At1g23540.1 68414.m02960 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 720
Score = 35.1 bits (77), Expect = 0.048
Identities = 35/124 (28%), Positives = 48/124 (38%), Gaps = 10/124 (8%)
Frame = +3
Query: 114 MDNLSSGGSTNELVIDTARATPVPQVTPQSARPPVDLSGLELLSNSIEQFERTTPGTSMP 293
M +L S++ A P + SA PPVD S ++S + P T P
Sbjct: 1 MSDLGESPSSSPPAPPADTAPPPETPSENSALPPVDSSPPSPPADSSSTPPLSEPSTPPP 60
Query: 294 --SLEPV-----PLTVDTRPTSKLNIMIKTSPKSPPRTEAE---PHRRFEFPPADPCNAE 443
L P+ PLT P S + + ++P PP T E P E PPA P +
Sbjct: 61 DSQLPPLPSILPPLTDSPPPPSDSSPPVDSTPSPPPPTSNESPSPPEDSETPPAPPNESN 120
Query: 444 PAKP 455
P
Sbjct: 121 DNNP 124
>At4g00890.1 68417.m00120 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 431
Score = 33.9 bits (74), Expect = 0.11
Identities = 26/91 (28%), Positives = 38/91 (41%)
Frame = +3
Query: 159 DTARATPVPQVTPQSARPPVDLSGLELLSNSIEQFERTTPGTSMPSLEPVPLTVDTRPTS 338
+T T +P PQ A+ P S ++ N+ E+FE P L P +TR S
Sbjct: 165 ETGDETQLPIPPPQEAKTPP--SSPSMMLNATEEFE----SQPKPPLLPSKSIDETRLRS 218
Query: 339 KLNIMIKTSPKSPPRTEAEPHRRFEFPPADP 431
L + P P ++ E R + PP P
Sbjct: 219 PLMSQASSPPPLPSKSIDENETRSQSPPISP 249
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 345 NIMIKTSPKSPPRTEAEPHRRFEFPPADPCNAEPAKP 455
N++I++ PKSPP + + P P EP P
Sbjct: 91 NLLIQSPPKSPPESTESQQQFLASVPLRPLTTEPKTP 127
>At3g03300.1 68416.m00327 DEAD/DEAH box helicase carpel
factory-related similar to RNA helicase GB:AAF03534
Length = 1317
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -2
Query: 666 YAYAFLFYSRIGLVYRIPCVYLCLSQQDCVKVHS*RTDGKIWTDYFVDF 520
YAY F S V+ +P V L Q + +K+H+ G W D VDF
Sbjct: 59 YAYLFRKPSPCFCVFLVPQVVLVTQQAEALKMHTDLKVGMYWGDMGVDF 107
>At4g16280.3 68417.m02471 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 533
Score = 32.7 bits (71), Expect = 0.26
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Frame = +3
Query: 183 PQVTPQSARPPVDLSGLELLSNSIEQFERTTPGTSMPSLEPVPLTVDTRPTSKLNIMIKT 362
PQ P RP + G + + + P + +P + + T P + LNI ++
Sbjct: 421 PQGLPLPLRPQTNFPGAQAPLQNPYAYSSQLPTSQLPPQQNISRA--TAPQTPLNINLRP 478
Query: 363 SPKS------PPRTEAEPHRRFEFPPAD 428
+ S PPR++ +P ++ + PP++
Sbjct: 479 TTVSSATVQFPPRSQQQPLQKMQHPPSE 506
>At4g16280.2 68417.m02470 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 747
Score = 32.7 bits (71), Expect = 0.26
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Frame = +3
Query: 183 PQVTPQSARPPVDLSGLELLSNSIEQFERTTPGTSMPSLEPVPLTVDTRPTSKLNIMIKT 362
PQ P RP + G + + + P + +P + + T P + LNI ++
Sbjct: 421 PQGLPLPLRPQTNFPGAQAPLQNPYAYSSQLPTSQLPPQQNISRA--TAPQTPLNINLRP 478
Query: 363 SPKS------PPRTEAEPHRRFEFPPAD 428
+ S PPR++ +P ++ + PP++
Sbjct: 479 TTVSSATVQFPPRSQQQPLQKMQHPPSE 506
>At4g16280.1 68417.m02469 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 505
Score = 32.7 bits (71), Expect = 0.26
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Frame = +3
Query: 183 PQVTPQSARPPVDLSGLELLSNSIEQFERTTPGTSMPSLEPVPLTVDTRPTSKLNIMIKT 362
PQ P RP + G + + + P + +P + + T P + LNI ++
Sbjct: 179 PQGLPLPLRPQTNFPGAQAPLQNPYAYSSQLPTSQLPPQQNISRA--TAPQTPLNINLRP 236
Query: 363 SPKS------PPRTEAEPHRRFEFPPAD 428
+ S PPR++ +P ++ + PP++
Sbjct: 237 TTVSSATVQFPPRSQQQPLQKMQHPPSE 264
>At3g24540.1 68416.m03082 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 509
Score = 32.3 bits (70), Expect = 0.34
Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 5/56 (8%)
Frame = +3
Query: 303 PVPLTVDTRPTSKLNIMIKTSPKSPPR---TEAEPH--RRFEFPPADPCNAEPAKP 455
P PL + P K + + SP PPR T P R PPA P EP P
Sbjct: 50 PEPLFSEPPPPPKAPVNVSLSPPPPPRSPSTSTPPRLGNRNPPPPASPSGQEPTTP 105
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 31.1 bits (67), Expect = 0.78
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Frame = +3
Query: 177 PVPQVTPQSARPPVDLSGLELLSNSIEQFERTTPGTSMPSLEP---VPLTVDTRPTSKLN 347
P VTP +PPV ++L ++ TP PS++P P T +P +
Sbjct: 81 PTIPVTP--VKPPVSTPPIKLPPVQPPTYKPPTPTVKPPSVQPPTYKPPTPTVKPPTTSP 138
Query: 348 IMIKTSP--KSPPRTEAEPHRRFEFPPADPCNAEPAKP 455
+ T+P +SPP + ++ P P P KP
Sbjct: 139 VKPPTTPPVQSPP-VQPPTYKPPTSPVKPPTTTPPVKP 175
Score = 28.3 bits (60), Expect = 5.5
Identities = 25/93 (26%), Positives = 34/93 (36%), Gaps = 4/93 (4%)
Frame = +3
Query: 180 VPQVTPQSARPPVDLSGLELLSNSIEQFERTTPGTSMPSLEPV--PLT--VDTRPTSKLN 347
+P V P + +PP ++ S ++ TP P+ PV P T V + P
Sbjct: 99 LPPVQPPTYKPPTPT--VKPPSVQPPTYKPPTPTVKPPTTSPVKPPTTPPVQSPPVQPPT 156
Query: 348 IMIKTSPKSPPRTEAEPHRRFEFPPADPCNAEP 446
TSP PP T PP P P
Sbjct: 157 YKPPTSPVKPPTTTPPVKPPTTTPPVQPPTYNP 189
>At4g32010.1 68417.m04557 transcriptional factor B3 family protein
low similarity to FUSCA3 [Arabidopsis thaliana]
GI:3582518, VIVIPAROUS1 protein [Triticum aestivum]
GI:7801376; contains Pfam profile PF02362: B3 DNA
binding domain
Length = 780
Score = 31.1 bits (67), Expect = 0.78
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +3
Query: 507 EEVEESPQNNLSISSRPFVKNEPLHSPAVRDRDR 608
E E S Q NLSIS P + P H AV DR +
Sbjct: 168 ERKELSAQPNLSISLGPTLMTSPFHDAAVDDRSK 201
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 31.1 bits (67), Expect = 0.78
Identities = 22/79 (27%), Positives = 30/79 (37%)
Frame = +3
Query: 162 TARATPVPQVTPQSARPPVDLSGLELLSNSIEQFERTTPGTSMPSLEPVPLTVDTRPTSK 341
T R P P P S P + S+ + R TP + P P+SK
Sbjct: 435 TVRVLPPPP--PSSKMSPTFRATPPPPSSKMSPSFRATPPPPSSKMSPSFRATPPPPSSK 492
Query: 342 LNIMIKTSPKSPPRTEAEP 398
++ +K P PP E EP
Sbjct: 493 MSPSVKAYPPPPPPPEYEP 511
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = +3
Query: 267 RTTPGTSMPSLEPVPLTVDTRPTSKLNIMIKTSPKSPPRTEAEPHRRFEFPPADPCNAEP 446
R TP + P P+SK++ + +P PP ++ P + PP P EP
Sbjct: 453 RATPPPPSSKMSPSFRATPPPPSSKMSPSFRATP-PPPSSKMSPSVKAYPPPPPPPEYEP 511
Query: 447 AKP 455
+ P
Sbjct: 512 SPP 514
>At1g20750.1 68414.m02599 helicase-related similar to BRCA1-binding
helicase-like protein BACH1 (GI:13661819) Homo sapiens].;
Length = 1179
Score = 31.1 bits (67), Expect = 0.78
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -1
Query: 334 VGLVSTVNGTGSKEGMLVPGVVLSNCSMLFERSSNPLRSTGGLALW 197
+ L+ +GTGS E V++++CS++ +R S+ G +W
Sbjct: 1020 LSLLKETSGTGSAEMPTSVSVIMTDCSLVNQRLCTNSESSNGQGIW 1065
>At3g60920.1 68416.m06815 beige/BEACH domain-containing protein
contains Pfam PF02138: Beige/BEACH domain; similar to LBA
isoform gamma (GI:10257405) [Mus musculus]; similar to
beige-like protein (CDC4L) - Homo sapiens; similar to
Neurobeachin: kinase A-anchoring, beige/Chediak-higashi
protein homolog implicated in neuronal membrane traffic
(AKAP550) (GI:11863541) [Drosophila melanogaster].
Length = 1928
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 246 NSIEQFERTTPGTSMPSLEPVPLTVDTRPTSKLNIMIKTSPKSPPRTEAE 395
N++++ T P T M S P T +T P S +NI+ S + + + E
Sbjct: 1810 NNVKELNTTDPNTHMVSSFSNPTTSETEPDSDMNIVSTPSNATTNQIDTE 1859
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/91 (25%), Positives = 36/91 (39%)
Frame = +3
Query: 174 TPVPQVTPQSARPPVDLSGLELLSNSIEQFERTTPGTSMPSLEPVPLTVDTRPTSKLNIM 353
TP+ P+ + P L+G + + +P +P+ P P + P
Sbjct: 66 TPLSSPPPEPSPPSPSLTGPPPTTIPVSPPPEPSPPPPLPTEAPPPANPVSSPPP----- 120
Query: 354 IKTSPKSPPRTEAEPHRRFEFPPADPCNAEP 446
++SP PP TEA P P+ P N P
Sbjct: 121 -ESSPPPPPPTEAPPTTPIT-SPSPPTNPPP 149
>At3g07100.1 68416.m00845 protein transport protein Sec24, putative
similar to protein transport protein Sec24A
(SEC24-related protein) [Homo sapiens] SWISS-PROT:O95486
Length = 1038
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 2/97 (2%)
Frame = +3
Query: 171 ATPVPQVTPQSARPPV--DLSGLELLSNSIEQFERTTPGTSMPSLEPVPLTVDTRPTSKL 344
+ P P + PQS PP + G + S Q R + P PV +P+ +
Sbjct: 22 SAPPPGIPPQSGGPPTGSEAVGFRPFTPSASQPTRPFTASGPPPAPPVGTMRPGQPSPFV 81
Query: 345 NIMIKTSPKSPPRTEAEPHRRFEFPPADPCNAEPAKP 455
+ I S PP + + P + P P P+ P
Sbjct: 82 S-QIPGSRPPPPSSNSFPSPAYGPPGGAPFQRFPSPP 117
>At2g46420.1 68415.m05777 expressed protein
Length = 363
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 138 STNELVIDTARATPVPQVTPQSARPPVDLSGLELLSN 248
S N++VIDT A P P + P S + +S + S+
Sbjct: 204 SGNDMVIDTTMAEPTPMIPPNSGMSDMPVSPASVASS 240
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 29.9 bits (64), Expect = 1.8
Identities = 34/143 (23%), Positives = 55/143 (38%), Gaps = 9/143 (6%)
Frame = +3
Query: 30 ESSSEGLTNSVMVGAVEKAIDAIERDDT-MDNLSSGGSTNELVIDTARATPVPQVTPQSA 206
ES+ E + + +V +++ D IE D M+ S E V+ + +++ +
Sbjct: 339 ESNDEDVIS--VVEEIKQKKDEIESIDVKMETEESVNLDEESVVLNGEQDTIMKISSLES 396
Query: 207 RPPVDLSGLELLSNSIEQFERTTPGTSMPSLE-------PVPLTVDTRPTSKLNIMIKTS 365
L+ E NS + F P P L P+P T P + + I +
Sbjct: 397 TSESKLNHSEKYENSSQLFPPPPPPPPPPPLSFIKTASLPLPSPPPTPPIADIAISMPPP 456
Query: 366 PKSPPRTEA-EPHRRFEFPPADP 431
P PP A P + F PP P
Sbjct: 457 PPPPPPPPAVMPLKHFAPPPPPP 479
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 29.5 bits (63), Expect = 2.4
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +3
Query: 231 LELLSNSIEQFER---TTPGTSMPSLEPVPLTVDTRPTSKLNIMIKTSPKSPPRTEAEPH 401
LELLS+ ++ R T PG+S PS P +RP + + P+ P R ++ P
Sbjct: 124 LELLSSMLDIPRRNLATKPGSS-PSPSP------SRPPKRS----RGPPRPPTRPKSPPP 172
Query: 402 RRFEFPPADPCNAEPAK 452
R+ FPP+ PAK
Sbjct: 173 RKSSFPPSRSPPPPPAK 189
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 29.5 bits (63), Expect = 2.4
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +3
Query: 231 LELLSNSIEQFER---TTPGTSMPSLEPVPLTVDTRPTSKLNIMIKTSPKSPPRTEAEPH 401
LELLS+ ++ R T PG+S PS P +RP + + P+ P R ++ P
Sbjct: 124 LELLSSMLDIPRRNLATKPGSS-PSPSP------SRPPKRS----RGPPRPPTRPKSPPP 172
Query: 402 RRFEFPPADPCNAEPAK 452
R+ FPP+ PAK
Sbjct: 173 RKSSFPPSRSPPPPPAK 189
>At3g28110.1 68416.m03508 hypothetical protein
Length = 354
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 270 TTPGTSMPSLEPVPLTVDTRPTS 338
T+ GT +P +EP + VDT PTS
Sbjct: 235 TSTGTHVPHVEPTGVLVDTTPTS 257
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 29.5 bits (63), Expect = 2.4
Identities = 29/96 (30%), Positives = 37/96 (38%), Gaps = 2/96 (2%)
Frame = +3
Query: 174 TP-VPQVTPQ-SARPPVDLSGLELLSNSIEQFERTTPGTSMPSLEPVPLTVDTRPTSKLN 347
TP VP TP S PP + + + TP S+PS P P PT +
Sbjct: 87 TPSVPSPTPPVSPPPPTPTPSVPSPTPPVSP-PPPTPTPSVPS--PTPPVSPPPPTPTPS 143
Query: 348 IMIKTSPKSPPRTEAEPHRRFEFPPADPCNAEPAKP 455
+ T P SPP P PP P + P+ P
Sbjct: 144 VPSPTPPVSPPPPTPTPSVPSPTPPV-PTDPMPSPP 178
>At2g22680.1 68415.m02688 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 683
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = -1
Query: 247 FERSSNPLRSTGGLALWGVTCGTGVALAVSITSSLVEPP 131
F S P RS G + + C T A AVS TSSL P
Sbjct: 41 FSTPSTP-RSDSGTGTYSLRCRTSTATAVSTTSSLPGTP 78
>At4g34440.1 68417.m04894 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 670
Score = 29.1 bits (62), Expect = 3.2
Identities = 28/100 (28%), Positives = 39/100 (39%), Gaps = 1/100 (1%)
Frame = +3
Query: 159 DTARATPVPQVTPQS-ARPPVDLSGLELLSNSIEQFERTTPGTSMPSLEPVPLTVDTRPT 335
+++ TP P S + PP D+S + T+P TS PS P P+ + P
Sbjct: 29 ESSPPTPPSSPPPSSISAPPPDISA-SFSPPPAPPTQETSPPTS-PSSSP-PVVANPSPQ 85
Query: 336 SKLNIMIKTSPKSPPRTEAEPHRRFEFPPADPCNAEPAKP 455
+ N SPP E PP P N P +P
Sbjct: 86 TPEN-------PSPPAPEGSTPVTPPAPPQTPSNQSPERP 118
>At4g16980.1 68417.m02560 arabinogalactan-protein family similar to
arabinogalactan protein [Arabidopsis thaliana]
gi|10880495|gb|AAG24277; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 164
Score = 29.1 bits (62), Expect = 3.2
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Frame = +3
Query: 111 TMDNLSSGGSTNELVIDTARATPVPQVTPQS---ARPPVDLSGLELLSNSIEQFERTTPG 281
+M +SSGG ++ + +P+P +TP PP+ ++ + + P
Sbjct: 37 SMPPMSSGGGSS---VPPPVMSPMPMMTPPPMPMTPPPMPMTPPPMPMAPPPMPMASPPM 93
Query: 282 TSM-PSLEPVPLTVDTRPTSKLNIMIKTSPK---SPPRTEAEP 398
M PS P PLTV P+ + +++SP PP A P
Sbjct: 94 MPMTPSTSPSPLTVPDMPSPPMPSGMESSPSPGPMPPAMAASP 136
>At2g39530.1 68415.m04850 integral membrane protein, putative
contains 3 transmembrane domains; contains Pfam PF04535
: Domain of unknown function (DUF588); similar to
putative ethylene responsive element binding protein
(GI:22135858) [Arabidopsis thaliana]
Length = 178
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -2
Query: 672 DLYAYAFLFYSR-IGLVYRIPCVYLCLSQQDCVKVHS*RTDGKIWTDYFVDFL 517
D+YAY ++ + IGLVY + ++L +SQ K H + D + +L
Sbjct: 55 DVYAYRYMLSAAVIGLVYAVVQLFLTISQFATGKTHPLTYQFDFYGDKVISYL 107
>At2g27380.1 68415.m03302 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 761
Score = 28.7 bits (61), Expect = 4.2
Identities = 28/97 (28%), Positives = 38/97 (39%), Gaps = 4/97 (4%)
Frame = +3
Query: 177 PVPQVTPQSARPPVDLSGLELLSNSIEQFERTTPGTSMPSLEPVPLTVDTRPTSKLNIMI 356
P P +P PPV + S I+ P T + S P V T PT + +
Sbjct: 226 PTPTYSPPVKPPPVHKPPTPIYSPPIKPPPVHKPPTPIYSPPVKPPPVQTPPTPIYSPPV 285
Query: 357 KTSP--KSPPRTEAEPHRR--FEFPPADPCNAEPAKP 455
K P K P T + P + + PP P + P KP
Sbjct: 286 KPPPVHKPPTPTYSPPVKSPPVQKPPT-PTYSPPIKP 321
Score = 28.3 bits (60), Expect = 5.5
Identities = 25/97 (25%), Positives = 36/97 (37%), Gaps = 4/97 (4%)
Frame = +3
Query: 177 PVPQVTPQSARPPVDLSGLELLSNSIEQ--FERTTPGTSMPSLEPVPLTVDTRPTSKLNI 350
P P +P PPV + S ++ ++ T P ++P PL PT +
Sbjct: 361 PTPIYSPPVKPPPVHKPPTPIYSPPVKPPPIQKPPTPTYSPPIKPPPL--QKPPTPTYSP 418
Query: 351 MIKTSPKSPPRTEAEPHRRFE--FPPADPCNAEPAKP 455
IK P PP P + P P + P KP
Sbjct: 419 PIKLPPVKPPTPIYSPPVKPPPVHKPPTPIYSPPVKP 455
Score = 28.3 bits (60), Expect = 5.5
Identities = 21/74 (28%), Positives = 25/74 (33%)
Frame = +3
Query: 177 PVPQVTPQSARPPVDLSGLELLSNSIEQFERTTPGTSMPSLEPVPLTVDTRPTSKLNIMI 356
P P +P PPV L S ++ P T S P V PT + I
Sbjct: 664 PTPTYSPPVKPPPVQLPPTPTYSPPVKPPPVQVPPTPTYSPPVKPPPVQVPPTPTYSPPI 723
Query: 357 KTSPKSPPRTEAEP 398
K P P T P
Sbjct: 724 KPPPVQVPPTPTTP 737
Score = 27.9 bits (59), Expect = 7.3
Identities = 24/95 (25%), Positives = 34/95 (35%), Gaps = 2/95 (2%)
Frame = +3
Query: 177 PVPQVTPQSARPPVDLSGLELLSNSIEQFERTTPGTSMPSLEPVPLTVDTRPTSKLNIMI 356
P P +P PPV + S ++ P T + S P + PT + I
Sbjct: 344 PTPIYSPPVKPPPVHKPPTPIYSPPVKPPPVHKPPTPIYSPPVKPPPIQKPPTPTYSPPI 403
Query: 357 KTSPKSPPRTE--AEPHRRFEFPPADPCNAEPAKP 455
K P P T + P + P P + P KP
Sbjct: 404 KPPPLQKPPTPTYSPPIKLPPVKPPTPIYSPPVKP 438
>At1g67290.1 68414.m07658 glyoxal oxidase-related contains
similarity to glyoxal oxidase precursor [Phanerochaete
chrysosporium] gi|1050302|gb|AAA87594
Length = 615
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 60 VMVGAVEKAIDAIERDDTMDNLSSGGST 143
V+V AV KA+ ++ DD DN S G T
Sbjct: 15 VLVAAVSKAVAEVDNDDDDDNTSLEGMT 42
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 28.3 bits (60), Expect = 5.5
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +3
Query: 210 PPVDLSGLELLSNSIEQFERTTPGTSMPS-LEPVPL-TVDTRPTSKLNIMIKTSPKSPPR 383
PP++ GLE +S+ + G S PS L+P L +VD+ P + + S
Sbjct: 524 PPIENMGLEKSDSSVSREANLVEGMSEPSGLKPTDLPSVDSVPKPSIIVNRSESANKLSF 583
Query: 384 TEAEPHRRFEFPPADPCNAEP 446
AE + PP N EP
Sbjct: 584 PSAEATSQAIVPP----NGEP 600
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 28.3 bits (60), Expect = 5.5
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +3
Query: 210 PPVDLSGLELLSNSIEQFERTTPGTSMPS-LEPVPL-TVDTRPTSKLNIMIKTSPKSPPR 383
PP++ GLE +S+ + G S PS L+P L +VD+ P + + S
Sbjct: 559 PPIENMGLEKSDSSVSREANLVEGMSEPSGLKPTDLPSVDSVPKPSIIVNRSESANKLSF 618
Query: 384 TEAEPHRRFEFPPADPCNAEP 446
AE + PP N EP
Sbjct: 619 PSAEATSQAIVPP----NGEP 635
>At2g47030.1 68415.m05876 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 588
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 358 LIMMLSFDVGLVSTVNGTGSKEGM-LVPGVVLSNCSMLFERSSNPLRST 215
LI++ G +TV G++ G+ + G+VL NC ++ +R P R T
Sbjct: 441 LIVVRKGSKGQYNTVTADGNELGLGMKIGIVLQNCRIVPDRKLTPERLT 489
>At1g64830.1 68414.m07350 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 431
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 448 AGSALQGSAGGNSNLLCGSASVLGGDFGEVLIMMLSFDVGLVSTVN 311
AGS + G GG+++L+ + G F L+ S + GL S +N
Sbjct: 212 AGSGIIGLGGGSTSLVSQLRKSINGKFSYCLVPFTS-ETGLTSKIN 256
>At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-related
similar to glucan endo-1,3-beta-glucosidase precursor
SP:P52409 from [Triticum aestivum]
Length = 330
Score = 28.3 bits (60), Expect = 5.5
Identities = 26/107 (24%), Positives = 40/107 (37%), Gaps = 1/107 (0%)
Frame = +3
Query: 129 SGGSTNELVIDTARATPV-PQVTPQSARPPVDLSGLELLSNSIEQFERTTPGTSMPSLEP 305
S +T+ V++ P P TP + PPV ++ T P T++P + P
Sbjct: 22 SSTTTHHDVLNPPTVFPTNPTTTPTATFPPVTITP-------------TNPATTVPIVPP 68
Query: 306 VPLTVDTRPTSKLNIMIKTSPKSPPRTEAEPHRRFEFPPADPCNAEP 446
V T I I +PP T + ++PP P P
Sbjct: 69 VTTIPPPTLTPPPVITIPPPTLTPPVTNPVTNPVTQYPPTQPSGTVP 115
>At1g02640.1 68414.m00214 glycosyl hydrolase family 3 protein
similar to beta-xylosidase GB:Z84377 GI:2102655 from
[Aspergillus niger]
Length = 768
Score = 28.3 bits (60), Expect = 5.5
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +3
Query: 18 DSAEESSSEGLTNSVMVGAVEKAIDAIERDDTMDNLSSGGSTNELVIDTARATPVPQVTP 197
D+A E++ G +V+V ++++I+A +D ++L G ELV A+A P +
Sbjct: 471 DAAVEAA-RGADATVLVMGLDQSIEAEFKD--RNSLLLPGKQQELVSRVAKAAKGPVILV 527
Query: 198 QSARPPVDLSGLE 236
+ P+D+S E
Sbjct: 528 LMSGGPIDISFAE 540
>At5g55020.1 68418.m06853 myb family transcription factor (MYB120)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 523
Score = 27.9 bits (59), Expect = 7.3
Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Frame = +3
Query: 159 DTARATPVPQVTPQSARPPVDLSGLELLSNSIEQFERTTPGT-SMPSLEPVPLTVDTRPT 335
+T ++P+P TP +A+ + +N + TP T S S P P + +
Sbjct: 185 NTPSSSPLPSPTPANAKSSSSFTFHTTTANLLHPLSPHTPNTPSQLSSTPPPPPLSSPLC 244
Query: 336 SKLNIMIKTSPK-SPPRTEAEPHR--RFEFPPADPCNAEPA 449
S N T P + PR++ + F FP P P+
Sbjct: 245 SPRNNQYPTLPLFALPRSQINNNNNGNFTFPRPPPLLQPPS 285
>At1g70460.1 68414.m08107 protein kinase, putative contains Pfam
PF00069: Protein kinase domain
Length = 710
Score = 27.9 bits (59), Expect = 7.3
Identities = 27/92 (29%), Positives = 32/92 (34%)
Frame = +3
Query: 171 ATPVPQVTPQSARPPVDLSGLELLSNSIEQFERTTPGTSMPSLEPVPLTVDTRPTSKLNI 350
A P P + PP D S L + P S P P PL P L
Sbjct: 28 AAPPPTDSAPPPSPPADSSPPPALPSLPPAVFSPPPTVSSPP--PPPLDSSPPPPPDLT- 84
Query: 351 MIKTSPKSPPRTEAEPHRRFEFPPADPCNAEP 446
P SPP +A P FPP P ++ P
Sbjct: 85 ---PPPSSPPPPDAPPPIPIVFPP--PIDSPP 111
>At1g16710.1 68414.m02003 TAZ zinc finger family protein / zinc
finger (ZZ type) family protein contains Pfam profiles
PF02135: TAZ zinc finger, PF00569: Zinc finger, ZZ type
Length = 1706
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = -1
Query: 589 AGLCKGSFLTNGREDMDRLFCGLSSTSSMNLCSANAHNNPKPPRAGFAGSALQGSAGGNS 410
AG G ++NG + R F L S SM A P GF S ++GG S
Sbjct: 201 AGGMHGGNMSNGYQHSSRNF-SLGSGGSMTSMGAQRSTAQMIPTPGFVNSVTNNNSGGFS 259
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 330 PTSKLNIMIKT-SPKSPPRTEAEPHRRFEFPPADPCNAEPAKP 455
P+SK++ ++ SP PP ++ P R +PP P + P P
Sbjct: 428 PSSKMSPSVRAYSPPPPPYSKMSPSVR-AYPPPPPPSPSPPPP 469
>At5g66050.1 68418.m08319 expressed protein
Length = 340
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 505 MNLCSANAHNNPKPPRAGFAGSALQGSAGGNSNLLCGSASVL 380
+NL S +H PK GS++ GS G+ +L ASVL
Sbjct: 48 LNLKSLRSHRRPKISHICCDGSSISGSGLGDPDLEFLQASVL 89
>At5g45275.1 68418.m05557 expressed protein Requires functional
assignment.
Length = 570
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -1
Query: 301 SKEGMLVPGVVLSNCSMLFERSSNPLRST-GGLALWGVTCGTGVALAVSITSSLVEP 134
++ G L ++ + ++ SS L + G AL G++ G A AVSITS L P
Sbjct: 420 ARTGWLAVALLPTTIALFLLASSGSLAALQAGTALIGLSSGFIFAAAVSITSELFGP 476
>At4g30260.1 68417.m04302 integral membrane Yip1 family protein
contains Pfam domain, PF04893: Yip1 domain
Length = 280
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/69 (21%), Positives = 29/69 (42%)
Frame = +3
Query: 225 SGLELLSNSIEQFERTTPGTSMPSLEPVPLTVDTRPTSKLNIMIKTSPKSPPRTEAEPHR 404
S ++ + N + ++ PGT +P+ P P+ + P S + P PP + + +
Sbjct: 15 SDIDEIENMMNDSFQSGPGTVLPARPPSPIR-PSIPVSSSPFVQSNLPPLPPSSSSSTQK 73
Query: 405 RFEFPPADP 431
P P
Sbjct: 74 VMPVPAPPP 82
>At3g56860.3 68416.m06325 UBP1 interacting protein 2a (UBA2a)
identical to UBP1 interacting protein 2a [Arabidopsis
thaliana] GI:19682816; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 478
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 487 NAHNNPKPPRAGFAGSALQGSAGGNSNLLCGSASVLGGDFGEVL 356
+A+NNP+ R G G GG+ +L+ G+ + +GG +V+
Sbjct: 337 HAYNNPRYQRNDNNG---YGPPGGHGHLMAGNPAGMGGPTAQVI 377
>At3g56860.2 68416.m06324 UBP1 interacting protein 2a (UBA2a)
identical to UBP1 interacting protein 2a [Arabidopsis
thaliana] GI:19682816; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 478
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 487 NAHNNPKPPRAGFAGSALQGSAGGNSNLLCGSASVLGGDFGEVL 356
+A+NNP+ R G G GG+ +L+ G+ + +GG +V+
Sbjct: 337 HAYNNPRYQRNDNNG---YGPPGGHGHLMAGNPAGMGGPTAQVI 377
>At3g56860.1 68416.m06323 UBP1 interacting protein 2a (UBA2a)
identical to UBP1 interacting protein 2a [Arabidopsis
thaliana] GI:19682816; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 478
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 487 NAHNNPKPPRAGFAGSALQGSAGGNSNLLCGSASVLGGDFGEVL 356
+A+NNP+ R G G GG+ +L+ G+ + +GG +V+
Sbjct: 337 HAYNNPRYQRNDNNG---YGPPGGHGHLMAGNPAGMGGPTAQVI 377
>At2g33290.1 68415.m04080 SET domain-containing protein (SUVH2)
identical to SUVH2 [Arabidopsis thaliana] GI:13517745;
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH2 (SUVH2) GI:13517744
Length = 651
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 256 SMLFERSSNPLRSTG--GLALWGVTCGTGVALAVSITSSLVEPP 131
S LF + PL+ G G++++G+ G VA+ L+EPP
Sbjct: 68 SELFRSAFKPLQVKGLDGVSVYGLDSGAIVAVPEKENRELIEPP 111
>At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearly
identical to ubiquitin-protein ligase 2 [Arabidopsis
thaliana] GI:7108523; E3, HECT-domain protein family;
similar to ubiquitin-protein ligase 2 GI:7108523 from
[Arabidopsis thaliana]
Length = 3658
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +3
Query: 90 DAIERDDTMDN---LSSGGSTNELVI-DTARATPVPQVTPQSARPPVDLSGLELLSNSIE 257
D ++ DD + LS G S+ + DT + VPQ + PPVD E+++ S++
Sbjct: 1315 DPVQEDDELAQALALSLGNSSETPKLEDTEKPVDVPQEEAEPKEPPVD----EVIAASVK 1370
Query: 258 QFE 266
F+
Sbjct: 1371 LFQ 1373
>At1g13470.1 68414.m01578 expressed protein
Length = 379
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 438 HCKDQLVGTQIFCAVLLQSWEEI 370
+ KDQL + + +LLQ WEE+
Sbjct: 224 NAKDQLKSSAYYSMILLQRWEEV 246
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,225,441
Number of Sequences: 28952
Number of extensions: 333157
Number of successful extensions: 1284
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1266
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1594686376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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