Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0679
         (791 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   6.5  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   6.5  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   8.5  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   8.5  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 676 LTHGSKRNVFVAPLIWFVASQ 614
           +TH   + +F  PL+  +ASQ
Sbjct: 229 VTHNEIQTIFSVPLLMKIASQ 249


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 676 LTHGSKRNVFVAPLIWFVASQ 614
           +TH   + +F  PL+  +ASQ
Sbjct: 54  VTHNEIQTIFSVPLLMKIASQ 74


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = -2

Query: 370 VVSAVGSDAAFCSSDWPHPV 311
           +V+ +G DA +C  +  +P+
Sbjct: 289 IVAPLGYDAYYCGGECEYPI 308


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 1   LTPNPIFIRGTQPDAPPSMFIQHSP 75
           L P+P+    T P+ P +  I H+P
Sbjct: 322 LYPSPVPGHSTSPNLPLTHNIAHNP 346


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.312    0.124    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,930
Number of Sequences: 336
Number of extensions: 2915
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)