Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0677
         (576 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3156|AAF49157.1|  728|Drosophila melanogaster CG9472-PA...    30   2.0  
AY118366-1|AAM48395.1| 2118|Drosophila melanogaster RE10379p pro...    29   4.5  
AL022018-1|CAA17682.1| 2118|Drosophila melanogaster EG:8D8.1 pro...    29   4.5  
AE014298-177|AAF45603.1| 2118|Drosophila melanogaster CG11411-PA...    29   4.5  

>AE014296-3156|AAF49157.1|  728|Drosophila melanogaster CG9472-PA
           protein.
          Length = 728

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 18/73 (24%), Positives = 33/73 (45%)
 Frame = +3

Query: 147 NFYSHSFTVHAVRLWNSLPADIRVCKSVSVFKYKVKQFYLSSTE*SWFYTLRIYECYCVT 326
           N   H F     + +  L +D R  KS+ +  Y +K+ +L +   + F    +Y     T
Sbjct: 277 NHVGHMFNYPESKGYKVLLSDTRH-KSLKIIDYLMKKNWLDANTTALFMDFSLYNADANT 335

Query: 327 YNICYVYVL*FSY 365
           + +C ++V  F Y
Sbjct: 336 FTVCTLWVEKFPY 348


>AY118366-1|AAM48395.1| 2118|Drosophila melanogaster RE10379p
           protein.
          Length = 2118

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +3

Query: 57  LRERFSFI-RSPDAPCRSNQRSVLLFPSHKTNFYSHSFTVHAVRLWN 194
           L + F F+      P RS +  +LL   H+  F +HS  V  V +WN
Sbjct: 404 LGQNFGFVDHYLPIPVRSYRDDLLLLVQHRVVFDTHSLLVLEVLVWN 450


>AL022018-1|CAA17682.1| 2118|Drosophila melanogaster EG:8D8.1
           protein.
          Length = 2118

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +3

Query: 57  LRERFSFI-RSPDAPCRSNQRSVLLFPSHKTNFYSHSFTVHAVRLWN 194
           L + F F+      P RS +  +LL   H+  F +HS  V  V +WN
Sbjct: 404 LGQNFGFVDHYLPIPVRSYRDDLLLLVQHRVVFDTHSLLVLEVLVWN 450


>AE014298-177|AAF45603.1| 2118|Drosophila melanogaster CG11411-PA
           protein.
          Length = 2118

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +3

Query: 57  LRERFSFI-RSPDAPCRSNQRSVLLFPSHKTNFYSHSFTVHAVRLWN 194
           L + F F+      P RS +  +LL   H+  F +HS  V  V +WN
Sbjct: 404 LGQNFGFVDHYLPIPVRSYRDDLLLLVQHRVVFDTHSLLVLEVLVWN 450


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,742,960
Number of Sequences: 53049
Number of extensions: 478749
Number of successful extensions: 1185
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1185
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)