Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0677
         (576 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    23   2.9  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              22   3.8  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              22   3.8  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   5.0  
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              22   5.0  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   6.6  

>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
 Frame = +1

Query: 73  LSFVLLMLPAGPTNVLFCYSLPTKPISILTPLLCTRSDCGIRCRLTSEFASLFLFLNTRS 252
           L+ + + + AG   V    ++    I IL  +L   +D G R   T        F++  +
Sbjct: 73  LNKLAVFIVAGAVGVFSVLTILISYIYILMAILRMSADGGCRNFSTCSSHPTAAFISYGT 132

Query: 253 NNFIYHQPNDHGSI-LFAYTSV--TVLLIIFAMCMC 351
             FIY QP+   S+ L    SV  T ++ +F+  +C
Sbjct: 133 LFFIYVQPSATFSLDLNKVVSVFYTAVIPMFSPFIC 168


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +1

Query: 322 LLIIFAMCMCYNS 360
           +++IFA C+C N+
Sbjct: 4   IVVIFAFCICVNA 16


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +1

Query: 322 LLIIFAMCMCYNS 360
           +++IFA C+C N+
Sbjct: 4   IVVIFAFCICVNA 16


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 423 YYSHYPLAGLLEEISQRNKQ 482
           YY+   LAG ++E +Q+ +Q
Sbjct: 221 YYAQVNLAGYIQEQNQQQQQ 240


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 346 MCYNSHIVFVILVMC 390
           M YN+  + +IL+MC
Sbjct: 1   MLYNNLTIVIILIMC 15


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 387 HN*NNKYNMRIIAHTHSKYYK 325
           +N NNKYN     +    YYK
Sbjct: 98  YNYNNKYNYNNNNYNKKLYYK 118


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,241
Number of Sequences: 438
Number of extensions: 3774
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)