Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0675
(699 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0779 - 28023735-28024058,28024520-28024618,28024704-280249... 32 0.50
06_03_1295 + 29100322-29100391,29100774-29100781,29101571-291016... 31 0.67
07_03_0332 + 16880184-16881017,16881334-16881462,16882685-168827... 31 0.88
04_03_0890 + 20576843-20578119,20578563-20578806,20578890-20580002 30 1.5
11_02_0133 + 8661030-8661141,8661727-8662031,8662158-8662331,866... 30 2.0
10_04_0022 + 7687383-7687670,7688479-7688556,7689456-7689535,768... 30 2.0
08_02_0473 + 17586507-17587004,17587146-17588145,17588314-175885... 30 2.0
08_01_0941 - 9301603-9301788,9301866-9301958,9302060-9302120,930... 30 2.0
05_07_0257 + 28719980-28720220,28721412-28721455,28722521-287225... 30 2.0
03_05_0791 + 27736978-27737217,27737648-27739191,27739512-277397... 30 2.0
02_03_0365 - 18198669-18198809,18198887-18198979,18199078-181991... 30 2.0
12_02_0240 - 16174724-16174927,16175005-16175097,16175199-161752... 29 2.7
12_01_0919 - 9086879-9087064,9087842-9087923,9088357-9089553,908... 29 2.7
09_01_0027 - 469856-470773,470780-471261,471296-471408,471453-47... 29 2.7
08_02_0236 + 14652034-14652225,14652311-14652527,14652561-146532... 29 2.7
08_01_1064 + 10841095-10842326,10842412-10842663,10842942-108430... 29 2.7
07_03_0316 + 16684100-16684339,16684425-16685132,16685241-166859... 29 2.7
06_02_0050 - 10951725-10951910,10951988-10952021,10952521-109527... 29 2.7
05_03_0470 + 14448243-14448482,14448568-14449181,14449508-144501... 29 2.7
05_03_0033 - 7585267-7586028 29 2.7
03_05_0594 + 25981587-25981826,25981912-25982160,25982257-259838... 29 2.7
02_02_0129 + 7055896-7056135,7056404-7056771,7056816-7056928,705... 29 2.7
01_02_0106 - 11175200-11175385,11175463-11175496,11175987-111762... 29 2.7
11_06_0245 + 21657691-21657963,21658049-21658216 29 4.7
11_04_0240 - 15246357-15246935,15247100-15247561 28 6.2
11_03_0184 + 11317787-11318198,11318337-11318671,11318756-113190... 28 6.2
10_08_0082 + 14713989-14714046,14714109-14714953 28 6.2
03_05_0190 - 21770610-21770641,21770741-21770811,21771058-217711... 28 6.2
01_03_0230 - 14004159-14004344,14004422-14004514,14004613-140046... 28 6.2
01_01_0401 + 3043634-3043894,3045610-3045849 28 6.2
04_04_0630 - 26719136-26719150,26720065-26720134,26720438-26721912 28 8.2
>04_04_0779 -
28023735-28024058,28024520-28024618,28024704-28024940,
28025227-28025334,28025427-28025486,28025813-28025888,
28025984-28026144,28026374-28026436,28026543-28026630,
28026872-28027612,28027695-28028239
Length = 833
Score = 31.9 bits (69), Expect = 0.50
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Frame = +1
Query: 94 NSVSVACATPTTAKPRASADGISK-----APRPLSNILPSGGIRPNSNVSTQTXXXXXXX 258
+SV +C + T ++P + + +S+ A RP ++ LP G+RP T +
Sbjct: 50 SSVEKSCRSTTVSRPTSPSKEVSRCQSFSADRPHAHPLPIPGVRP-PVTRTVSDITESKP 108
Query: 259 XXKQRGKPGVRSPAP 303
++RGKP + P P
Sbjct: 109 ILEKRGKPPLLLPLP 123
>06_03_1295 +
29100322-29100391,29100774-29100781,29101571-29101676,
29101994-29102264,29102331-29103188,29103280-29103388
Length = 473
Score = 31.5 bits (68), Expect = 0.67
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
Frame = +3
Query: 18 IHKGNSTGRAPLHVHTALAAEHCPPQQRE-------RSVCDAYYSKAACFCRWDFEGSSS 176
IH+G G P V ALA +H P E RSV +SK + C ++ G +S
Sbjct: 256 IHQGYFIGNPPFDVTIALARQHPPKLGEEAITAIWLRSVKIGGWSKGSVRCDYEHSGLNS 315
Query: 177 VIEHPA-LWW 203
+ H L+W
Sbjct: 316 LTIHQGMLFW 325
>07_03_0332 +
16880184-16881017,16881334-16881462,16882685-16882750,
16883159-16883224,16884419-16884457,16884858-16885028
Length = 434
Score = 31.1 bits (67), Expect = 0.88
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 70 SPQNTVHHNSVSVACATPTTAKPRASADGISKAPRPLSNILPSGG 204
+P N HH + AC P A A+A G + S+ L SGG
Sbjct: 120 APPNHGHHVGGAAACDNPAVAAAMAAAHGGGNVKQSGSSFLDSGG 164
>04_03_0890 + 20576843-20578119,20578563-20578806,20578890-20580002
Length = 877
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3
Query: 118 SHTLRSRCCGGQCSAAS 68
SH L SRCCGG CSAA+
Sbjct: 458 SHLL-SRCCGGDCSAAT 473
>11_02_0133 +
8661030-8661141,8661727-8662031,8662158-8662331,
8662469-8662783,8662886-8663456,8663474-8663786,
8663870-8663968,8664202-8664315,8664403-8664463,
8664565-8664657,8664742-8664927
Length = 780
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 88 HHNSVSVACATPTTAKPRASADGISKAPRP 177
H N +S T T KP G+ K PRP
Sbjct: 339 HKNDISFELGTDATQKPMVPKPGLGKPPRP 368
>10_04_0022 +
7687383-7687670,7688479-7688556,7689456-7689535,
7689876-7690095,7690444-7690677
Length = 299
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -2
Query: 155 PSAEARGFAVVGVAHATLTLLWWTVFCGECCMNMEGGASG*VPLMNIG 12
PSA ARG V V H +T LW +G A+G +P+M+IG
Sbjct: 86 PSATARGSQAVAVRHGCVTDLW------------QGNATGNLPVMHIG 121
>08_02_0473 +
17586507-17587004,17587146-17588145,17588314-17588566,
17588647-17588757,17588845-17588905,17588994-17589086,
17589164-17589349
Length = 733
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +1
Query: 88 HHNSVSVACATPTTAKPRASADGISKAPRP 177
H N +S T T KP G++K PRP
Sbjct: 267 HKNDISFGLGTDATRKPVVPKPGLAKPPRP 296
>08_01_0941 -
9301603-9301788,9301866-9301958,9302060-9302120,
9302397-9302648,9302903-9303720,9303993-9304490
Length = 635
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 88 HHNSVSVACATPTTAKPRASADGISKAPRP 177
H N +S T T KP G+ K PRP
Sbjct: 226 HKNDISFGLGTDATRKPLVPKPGLGKPPRP 255
>05_07_0257 +
28719980-28720220,28721412-28721455,28722521-28722590,
28722693-28722816,28723420-28724060,28725100-28725364,
28725434-28725713,28726042-28726209,28726867-28727358,
28727432-28727689
Length = 860
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 73 PQNTVHHNSVSVACATPTTAKPRASADGISKAPRPLSNILP 195
P NT+++N + ATP+ +P +SA + R L NI P
Sbjct: 510 PNNTMYNNLSTSDYATPSAVQPDSSAHIYLQEHRQLQNISP 550
>03_05_0791 +
27736978-27737217,27737648-27739191,27739512-27739763,
27739844-27739954,27740042-27740102,27740373-27740558
Length = 797
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 88 HHNSVSVACATPTTAKPRASADGISKAPRP 177
H N +S T T KP G+ K PRP
Sbjct: 410 HKNDISFGLGTDATQKPVVDKPGLGKPPRP 439
>02_03_0365 -
18198669-18198809,18198887-18198979,18199078-18199138,
18199291-18199336,18199417-18199682,18199766-18200744,
18201012-18201564,18201661-18201909,18201995-18202234
Length = 875
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 88 HHNSVSVACATPTTAKPRASADGISKAPRP 177
H N VS T T KP G+ K PRP
Sbjct: 404 HKNDVSFGLGTDATEKPVVPKPGLGKPPRP 433
>12_02_0240 -
16174724-16174927,16175005-16175097,16175199-16175258,
16175708-16175789,16175873-16176075,16176222-16177226,
16177371-16177643
Length = 639
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 88 HHNSVSVACATPTTAKPRASADGISKAPRP 177
H N +S T T KP G+ K PRP
Sbjct: 265 HKNDISFGLGTDATQKPVVPKPGLGKPPRP 294
>12_01_0919 -
9086879-9087064,9087842-9087923,9088357-9089553,
9089598-9089961,9090086-9090188,9090234-9090479
Length = 725
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 88 HHNSVSVACATPTTAKPRASADGISKAPRP 177
H N +S T T KP G+ K PRP
Sbjct: 484 HKNDISFGLGTDATQKPVVPKPGLGKPPRP 513
>09_01_0027 -
469856-470773,470780-471261,471296-471408,471453-472003,
472089-472328
Length = 767
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 88 HHNSVSVACATPTTAKPRASADGISKAPRP 177
H N +S T T KP G+ K PRP
Sbjct: 497 HKNDISFGLGTDATEKPVVPKPGLGKPPRP 526
>08_02_0236 +
14652034-14652225,14652311-14652527,14652561-14653208,
14653374-14654364,14654532-14654703
Length = 739
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +1
Query: 88 HHNSVSVACATPTTAKPRASADGISKAPRP 177
H N +S T T KP G+ K P+P
Sbjct: 443 HKNDISFGLGTDATRKPEVPKPGLGKPPKP 472
>08_01_1064 +
10841095-10842326,10842412-10842663,10842942-10843020,
10843274-10843459
Length = 582
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 88 HHNSVSVACATPTTAKPRASADGISKAPRP 177
H N +S T T KP G+ K PRP
Sbjct: 141 HKNDISFGLGTDATQKPVVPKPGLGKPPRP 170
>07_03_0316 +
16684100-16684339,16684425-16685132,16685241-16685939,
16685992-16686053,16686096-16686368,16686622-16686873,
16686954-16687064,16687152-16687212,16687312-16687404,
16687482-16687667
Length = 894
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 88 HHNSVSVACATPTTAKPRASADGISKAPRP 177
H N +S T T KP G+ K PRP
Sbjct: 489 HKNDISFGLGTDATRKPVVPKPGLGKPPRP 518
>06_02_0050 -
10951725-10951910,10951988-10952021,10952521-10952772,
10953093-10954114
Length = 497
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 88 HHNSVSVACATPTTAKPRASADGISKAPRP 177
H N +S T T KP G+ K PRP
Sbjct: 141 HKNDISFGLGTDATQKPVVPKPGLGKPPRP 170
>05_03_0470 +
14448243-14448482,14448568-14449181,14449508-14450135,
14450217-14450827,14450911-14451162,14451243-14451353,
14451441-14451501,14451603-14451695,14451773-14451940
Length = 925
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 88 HHNSVSVACATPTTAKPRASADGISKAPRP 177
H N +S T T KP G+ K PRP
Sbjct: 461 HKNDISFGLGTDATQKPVVPKPGLGKPPRP 490
>05_03_0033 - 7585267-7586028
Length = 253
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/108 (19%), Positives = 42/108 (38%)
Frame = +1
Query: 7 PNPIFIRGTQPDAPPSMFIQHSPQNTVHHNSVSVACATPTTAKPRASADGISKAPRPLSN 186
P P + +QP++ P+ + + P++ S A +T +P A ++ S+ P+P S
Sbjct: 85 PEPEAMSASQPESKPATYSESKPESKAEPESKPEPKA-ESTPQPEAKSEPKSE-PKPKSE 142
Query: 187 ILPSGGIRPNSNVSTQTXXXXXXXXXKQRGKPGVRSPAPANKQDAANQ 330
+ P S ++ + P P + A +Q
Sbjct: 143 LYAEPKSEPKSEPQSEPNPETKAEPKSEPKSEPKSEPTPQTEPKAESQ 190
>03_05_0594 +
25981587-25981826,25981912-25982160,25982257-25983818,
25984139-25984390,25984471-25984581,25984669-25984729,
25984829-25984921,25984999-25985184
Length = 917
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 88 HHNSVSVACATPTTAKPRASADGISKAPRP 177
H N +S T T KP G+ K PRP
Sbjct: 493 HKNDISFGLGTDATQKPVVPKPGLGKPPRP 522
>02_02_0129 +
7055896-7056135,7056404-7056771,7056816-7056928,
7057014-7057118,7057283-7057860,7057889-7058346,
7058430-7058681,7058762-7058872,7058960-7059020,
7059122-7059214,7059292-7059477
Length = 854
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 88 HHNSVSVACATPTTAKPRASADGISKAPRP 177
H N +S T T KP G+ K PRP
Sbjct: 366 HKNDISFGLGTDATQKPVVPKPGLGKPPRP 395
>01_02_0106 -
11175200-11175385,11175463-11175496,11175987-11176247,
11176501-11176831,11176899-11177589,11177611-11178156,
11178441-11178680
Length = 762
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 88 HHNSVSVACATPTTAKPRASADGISKAPRP 177
H N +S T T KP G+ K PRP
Sbjct: 403 HKNDISFGLGTDATQKPVVPKPGLGKPPRP 432
>11_06_0245 + 21657691-21657963,21658049-21658216
Length = 146
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 560 NSKE*RWACNKVLRLCPSLGCHKPYQWCNKY 652
N ++ W NKV C + +KP W KY
Sbjct: 39 NPQQNNWDLNKVSAYCATWDANKPLSWRQKY 69
>11_04_0240 - 15246357-15246935,15247100-15247561
Length = 346
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = -3
Query: 190 GCSITDEEP-SKSHRQKHXXXXXXASHTLRSRCCGGQCSAAS 68
G + D P S Q H S R RCCG QCS S
Sbjct: 109 GWVVWDNVPVSTGAEQGHAEIMRALSQIQRKRCCGPQCSRYS 150
>11_03_0184 +
11317787-11318198,11318337-11318671,11318756-11319048,
11319125-11319483,11319549-11319748,11319823-11320012,
11320084-11320188,11320262-11320338,11320428-11320649
Length = 730
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +3
Query: 252 SEPGKAARQARREVXXXXXXXXXXXXDEQNAASDPTAETTIVSDELVRSDGADNERARQT 431
S+P A RQ+ R + Q +ASDP ++ +LV SD ++ R+
Sbjct: 256 SDPPIAQRQSPRRQTGQGSGGPRIRSETQPSASDPVGQSDSRKRKLVLSDDEADDTTRKP 315
Query: 432 GSEQ 443
G +
Sbjct: 316 GDRE 319
>10_08_0082 + 14713989-14714046,14714109-14714953
Length = 300
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 345 ASDPTAETTIVSDELVRSDGADNERARQTGSEQEPP 452
AS P+A T SDE V+ + + TG EPP
Sbjct: 8 ASSPSAATAGASDEKVKVQAKSDFQISYTGQVDEPP 43
>03_05_0190 -
21770610-21770641,21770741-21770811,21771058-21771168,
21771249-21771500,21771584-21772086,21772188-21773234,
21773361-21773768,21773814-21773956,21774020-21774053
Length = 866
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 88 HHNSVSVACATPTTAKPRASADGISKAPRP 177
H N +S T T KP G+ K PRP
Sbjct: 475 HKNDISFGLGTDATQKPVVPKLGLGKPPRP 504
>01_03_0230 -
14004159-14004344,14004422-14004514,14004613-14004673,
14004761-14004874,14004955-14005206,14005293-14007037
Length = 816
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 88 HHNSVSVACATPTTAKPRASADGISKAPRP 177
H N +S T T KP G+ K PRP
Sbjct: 314 HKNDISFGLGTDATQKPVVPKLGLGKPPRP 343
>01_01_0401 + 3043634-3043894,3045610-3045849
Length = 166
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 433 PVCLARSLSAPSDRTSSSLTIVVSAVGSDAAFCSSD 326
PV + L AP+ S + V+S +G + FCSSD
Sbjct: 50 PVVMGEPLGAPAPPRESWNSGVLSCLGRNDEFCSSD 85
>04_04_0630 - 26719136-26719150,26720065-26720134,26720438-26721912
Length = 519
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -3
Query: 445 SCSEPVCLARSLSAPSDRTSSSLTIVVSAVGSDAAFCSSDWPHPVY 308
SC+ P+C A SAP+ ++ + A+ +D+ C+S P+Y
Sbjct: 150 SCASPLCSAAHSSAPTSDLCAAARCPLDAIETDS--CASHACPPLY 193
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.312 0.126 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,948,672
Number of Sequences: 37544
Number of extensions: 351935
Number of successful extensions: 874
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
- SilkBase 1999-2023 -