Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0675
(699 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ345015-1|CAC87812.1| 577|Caenorhabditis elegans FEH-1 protein... 30 1.8
AC025723-11|AAN84832.2| 554|Caenorhabditis elegans Mammalian fe... 30 1.8
AC025723-9|AAN84831.1| 640|Caenorhabditis elegans Mammalian fe6... 30 1.8
Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical p... 29 3.2
Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical p... 29 3.2
Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical p... 29 3.2
U29381-3|AAA68758.2| 617|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C... 29 3.2
AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B... 29 3.2
AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A... 29 3.2
AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein. 29 3.2
Z81134-6|CAB03450.2| 795|Caenorhabditis elegans Hypothetical pr... 29 4.2
AL117202-31|CAD56610.1| 795|Caenorhabditis elegans Hypothetical... 29 4.2
Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr... 28 7.4
AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical... 28 7.4
AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical... 28 7.4
AF078784-1|AAK18967.1| 458|Caenorhabditis elegans Hypothetical ... 28 7.4
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 28 7.4
AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe... 28 7.4
AC024877-4|ABQ13047.1| 697|Caenorhabditis elegans Phosphodieste... 28 7.4
AC024877-3|AAF60898.1| 760|Caenorhabditis elegans Phosphodieste... 28 7.4
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 27 9.8
U80846-1|AAC70888.1| 120|Caenorhabditis elegans Hypothetical pr... 27 9.8
U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical pr... 27 9.8
>AJ345015-1|CAC87812.1| 577|Caenorhabditis elegans FEH-1 protein
protein.
Length = 577
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/53 (37%), Positives = 23/53 (43%)
Frame = +1
Query: 7 PNPIFIRGTQPDAPPSMFIQHSPQNTVHHNSVSVACATPTTAKPRASADGISK 165
P P R TQ DAPP IQ PQ V + TT K R D +S+
Sbjct: 175 PPPPVNRETQADAPPPQIIQLPPQQPV----IEEHAFKQTTTKRRIEQDEMSE 223
>AC025723-11|AAN84832.2| 554|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform c protein.
Length = 554
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/53 (37%), Positives = 23/53 (43%)
Frame = +1
Query: 7 PNPIFIRGTQPDAPPSMFIQHSPQNTVHHNSVSVACATPTTAKPRASADGISK 165
P P R TQ DAPP IQ PQ V + TT K R D +S+
Sbjct: 152 PPPPVNRETQADAPPPQIIQLPPQQPV----IEEHAFKQTTTKRRIEQDEMSE 200
>AC025723-9|AAN84831.1| 640|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform b protein.
Length = 640
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/53 (37%), Positives = 23/53 (43%)
Frame = +1
Query: 7 PNPIFIRGTQPDAPPSMFIQHSPQNTVHHNSVSVACATPTTAKPRASADGISK 165
P P R TQ DAPP IQ PQ V + TT K R D +S+
Sbjct: 263 PPPPVNRETQADAPPPQIIQLPPQQPV----IEEHAFKQTTTKRRIEQDEMSE 311
>Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 70 SPQNTVHHNSVSVACATPTTAKPRASADGISKAPRPL 180
+P +HH+ V TP + P S D I+ P P+
Sbjct: 142 TPPRGIHHSGEPVHQKTPRKSAPNMSVDSIAMPPPPV 178
>Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 70 SPQNTVHHNSVSVACATPTTAKPRASADGISKAPRPL 180
+P +HH+ V TP + P S D I+ P P+
Sbjct: 142 TPPRGIHHSGEPVHQKTPRKSAPNMSVDSIAMPPPPV 178
>Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 70 SPQNTVHHNSVSVACATPTTAKPRASADGISKAPRPL 180
+P +HH+ V TP + P S D I+ P P+
Sbjct: 142 TPPRGIHHSGEPVHQKTPRKSAPNMSVDSIAMPPPPV 178
>Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 70 SPQNTVHHNSVSVACATPTTAKPRASADGISKAPRPL 180
+P +HH+ V TP + P S D I+ P P+
Sbjct: 142 TPPRGIHHSGEPVHQKTPRKSAPNMSVDSIAMPPPPV 178
>U29381-3|AAA68758.2| 617|Caenorhabditis elegans Hypothetical
protein F35D11.3 protein.
Length = 617
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 112 CATPTTAKPRASADGISKAPRPLSNILPSGGIRPNSN 222
CATPT + S+D ++P+P+S P + S+
Sbjct: 4 CATPTPSTSSNSSDEAKRSPQPMSRGFPQRNMSTTSS 40
>AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C
protein.
Length = 1347
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 70 SPQNTVHHNSVSVACATPTTAKPRASADGISKAPRPL 180
+P +HH+ V TP + P S D I+ P P+
Sbjct: 19 TPPRGIHHSGEPVHQKTPRKSAPNMSVDSIAMPPPPV 55
>AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B
protein.
Length = 1311
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 70 SPQNTVHHNSVSVACATPTTAKPRASADGISKAPRPL 180
+P +HH+ V TP + P S D I+ P P+
Sbjct: 142 TPPRGIHHSGEPVHQKTPRKSAPNMSVDSIAMPPPPV 178
>AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A
protein.
Length = 1470
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 70 SPQNTVHHNSVSVACATPTTAKPRASADGISKAPRPL 180
+P +HH+ V TP + P S D I+ P P+
Sbjct: 142 TPPRGIHHSGEPVHQKTPRKSAPNMSVDSIAMPPPPV 178
>AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein.
Length = 1470
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 70 SPQNTVHHNSVSVACATPTTAKPRASADGISKAPRPL 180
+P +HH+ V TP + P S D I+ P P+
Sbjct: 142 TPPRGIHHSGEPVHQKTPRKSAPNMSVDSIAMPPPPV 178
>Z81134-6|CAB03450.2| 795|Caenorhabditis elegans Hypothetical
protein T28D6.5a protein.
Length = 795
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 40 DAPPSMFIQHSPQNTVHHNSVSVACATPTTA 132
+ PPS IQ+ QN ++HN+ S + T TTA
Sbjct: 760 ETPPSSPIQNHIQNHLNHNTESDSEVTTTTA 790
>AL117202-31|CAD56610.1| 795|Caenorhabditis elegans Hypothetical
protein T28D6.5a protein.
Length = 795
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 40 DAPPSMFIQHSPQNTVHHNSVSVACATPTTA 132
+ PPS IQ+ QN ++HN+ S + T TTA
Sbjct: 760 ETPPSSPIQNHIQNHLNHNTESDSEVTTTTA 790
>Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical protein
Y37A1B.17b protein.
Length = 1467
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +1
Query: 40 DAPPSMFIQHSPQNTVHHNSVSVACATPTTAKPRASADGISKAPRPLSNILPSGGIR 210
+AP SM P +++ + A A PT P S S +P+PL P ++
Sbjct: 1311 EAPSSMGSLGLPTGSMNQKRSASAAAQPTNVWPTTSMMSRSDSPQPLIPSRPEPAVK 1367
>Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical protein
Y37A1B.17a protein.
Length = 1538
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +1
Query: 40 DAPPSMFIQHSPQNTVHHNSVSVACATPTTAKPRASADGISKAPRPLSNILPSGGIR 210
+AP SM P +++ + A A PT P S S +P+PL P ++
Sbjct: 1311 EAPSSMGSLGLPTGSMNQKRSASAAAQPTNVWPTTSMMSRSDSPQPLIPSRPEPAVK 1367
>AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +1
Query: 40 DAPPSMFIQHSPQNTVHHNSVSVACATPTTAKPRASADGISKAPRPLSNILPSGGIR 210
+AP SM P +++ + A A PT P S S +P+PL P ++
Sbjct: 1311 EAPSSMGSLGLPTGSMNQKRSASAAAQPTNVWPTTSMMSRSDSPQPLIPSRPEPAVK 1367
>AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +1
Query: 40 DAPPSMFIQHSPQNTVHHNSVSVACATPTTAKPRASADGISKAPRPLSNILPSGGIR 210
+AP SM P +++ + A A PT P S S +P+PL P ++
Sbjct: 1311 EAPSSMGSLGLPTGSMNQKRSASAAAQPTNVWPTTSMMSRSDSPQPLIPSRPEPAVK 1367
>AF078784-1|AAK18967.1| 458|Caenorhabditis elegans Hypothetical
protein H34I24.2 protein.
Length = 458
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 103 SVACATPTTAKPRASADGISKAPRPLSNILPSGG 204
S A A+PT+ P A+ + + P+S + PS G
Sbjct: 51 SQAPASPTSVDPSATTQAAASSGAPVSTVSPSSG 84
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 37 PDAPPSMFIQHSPQNTVHHNSVSVACATPTTAKPRASADGISKAPRP 177
PDAP + +Q +PQ + + A TP A + + ++ AP P
Sbjct: 107 PDAPAAAPVQETPQVAPAPETPAPAPETPAPAPVQETPQVVAPAPEP 153
>AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform a protein.
Length = 691
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +1
Query: 25 RGTQPDAPPSMFIQHSPQNTVHHNSVSVACATPTTAKPRASADGISK 165
R TQ DAPP IQ PQ V + TT K R D +S+
Sbjct: 320 RETQADAPPPQIIQLPPQQPV----IEEHAFKQTTTKRRIEQDEMSE 362
>AC024877-4|ABQ13047.1| 697|Caenorhabditis elegans
Phosphodiesterase protein 6, isoformb protein.
Length = 697
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 12 PYIHKGNSTGRAPLHVHTALAAEHCPPQQRERSVCDAYYSK 134
P I++ R + L H P +QR+RSV DA+ K
Sbjct: 380 PSINRFRDADRIATQYYDGLIRLHHPARQRKRSVVDAHREK 420
>AC024877-3|AAF60898.1| 760|Caenorhabditis elegans
Phosphodiesterase protein 6, isoforma protein.
Length = 760
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 12 PYIHKGNSTGRAPLHVHTALAAEHCPPQQRERSVCDAYYSK 134
P I++ R + L H P +QR+RSV DA+ K
Sbjct: 380 PSINRFRDADRIATQYYDGLIRLHHPARQRKRSVVDAHREK 420
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +1
Query: 73 PQNTVHHNSVSVACATPTTAKPRASADGISKAPRPLSNILPSGGIRPNS 219
P+ S A T T +P A + APR L++ P+G RP +
Sbjct: 234 PRPVAGKPSARPATTTGTATRPTRPAVPAASAPRALTSRAPAGPSRPTT 282
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +1
Query: 73 PQNTVHHNSVSVACATPTTAKPRASADGISKAPRPLSNILPSGGIRPNS 219
P+ S A T T +P A + APR L++ P+G RP +
Sbjct: 234 PRPVAGKPSARPATTTGTATRPTRPAVPAASAPRALTSRAPAGPSRPTT 282
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +1
Query: 73 PQNTVHHNSVSVACATPTTAKPRASADGISKAPRPLSNILPSGGIRPNS 219
P+ S A T T +P A + APR L++ P+G RP +
Sbjct: 234 PRPVAGKPSARPATTTGTATRPTRPAVPAASAPRALTSRAPAGPSRPTT 282
>U80846-1|AAC70888.1| 120|Caenorhabditis elegans Hypothetical
protein K06A9.3 protein.
Length = 120
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = +3
Query: 63 TALAAEHCPPQQRERSVCDAYYSKAACFCRWDFEG 167
T + CP + R C + CFC+ FEG
Sbjct: 22 TRMIDSMCPSECHSRGYCFRIEGEPRCFCQAGFEG 56
>U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical protein
T28D9.7 protein.
Length = 982
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 1 LTPNPI--FIRGTQPDA-PPSMFIQHSPQNTVHHNSVSVACATPTTAKPRASADG 156
LTP+ I F+ Q ++ PPS H P++ ++N + +P + +P + +G
Sbjct: 859 LTPSEIKNFLDQVQRNSQPPSYHDDHHPEDHYYYNDPNYLTISPPSDRPEDNREG 913
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.312 0.126 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,897,247
Number of Sequences: 27780
Number of extensions: 259623
Number of successful extensions: 622
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
- SilkBase 1999-2023 -