Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0675
         (699 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    25   0.69 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.1  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    22   4.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   6.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   6.4  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   8.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   8.5  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   8.5  

>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 609 HRWDATNHINGATNTSSWSHGSS 677
           H W   + +N   + +SWSHGS+
Sbjct: 163 HTWWPYDILNCTIHIASWSHGSN 185


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -1

Query: 99   AVVVDSVLRRVLYEHGGGRVRLSSPYEYR 13
            A +V+S LR    ++  GRV   +P+E+R
Sbjct: 961  AFIVNSNLRLTFSKNVQGRVGFVTPFEHR 989


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 524 INNKLSKWCNIINSKE*RWA 583
           I NK++ W N++ + E  WA
Sbjct: 149 IANKINSWDNVVVAYEPVWA 168


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +3

Query: 339  NAASDPTAETTIVSDELVRSDGADNERARQTG 434
            NA  DPT E      E +R+D   N +   +G
Sbjct: 1336 NAVGDPTREWYKGQGEQIRTDSTRNIQILPSG 1367


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +3

Query: 339  NAASDPTAETTIVSDELVRSDGADNERARQTG 434
            NA  DPT E      E +R+D   N +   +G
Sbjct: 1332 NAVGDPTREWYKGQGEQIRTDSTRNIQILPSG 1363


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -3

Query: 436 EPVCLARSLSAPSDRTSSSLTIVVSAVGSDAAFC 335
           E  C+ +S +A +   ++ LTI    V    A C
Sbjct: 124 EAFCIIQSFAAETSANATVLTITAFTVERYIAIC 157


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 15/59 (25%), Positives = 23/59 (38%)
 Frame = +1

Query: 142 ASADGISKAPRPLSNILPSGGIRPNSNVSTQTXXXXXXXXXKQRGKPGVRSPAPANKQD 318
           A++  +   P   +N  PS   R  S  S+ T            G+P  R+    NKQ+
Sbjct: 494 AASTAVIHEPVVETNSSPSPNPRIASAPSSSTSSSPPAKGAAAAGQPSKRNGGETNKQE 552


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +2

Query: 617 GCHKPYQWCN 646
           GC  P+QW N
Sbjct: 411 GCRTPFQWDN 420


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.312    0.126    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,148
Number of Sequences: 438
Number of extensions: 3149
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)