Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0674
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   3.8  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   8.8  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.8  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   8.8  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = -2

Query: 128 KTSQKNNNFCIEIIKINFSRFDPRVYYLQFIFSP 27
           KT  K N +C  II    S F   VYY     +P
Sbjct: 313 KTVLKTNKYCNFIILFYLSVFVILVYYASLDETP 346


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 316 IFRYTHIMMELW 351
           IF YT I +E+W
Sbjct: 220 IFTYTSICIEIW 231


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 378 YEGKTPQYTKYQHDWTND 431
           Y+G+ P Y  Y + ++ D
Sbjct: 381 YQGEHPNYNHYGYHYSGD 398


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 378 YEGKTPQYTKYQHDWTND 431
           Y+G+ P Y  Y + ++ D
Sbjct: 329 YQGEHPNYNHYGYHYSGD 346


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,134
Number of Sequences: 336
Number of extensions: 2801
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)