Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0674
         (651 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   6.3  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   6.3  
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    23   6.3  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   8.4  

>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +2

Query: 419 LDKRHVHALK*ANLDIIICLVFLTRSC*LCLYVLISVGSG 538
           L+++H    +  +L+  +  + L + C LC Y+   +GSG
Sbjct: 100 LEQKHKQNYRILDLEARLVNITLEKLCELCKYIDSWLGSG 139


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 600 PPDGEWLPSPMDFSNATG 547
           PPD  W P  + F+NA G
Sbjct: 104 PPDKVWKPDIVLFNNADG 121


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -1

Query: 594 DGEWLPSPMDFSNATGRAKPLPTEMSTYR 508
           DGEW P  +D     G  KP   +   Y+
Sbjct: 255 DGEWEPPMIDNPEYKGEWKPKQIDNPAYK 283


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +1

Query: 322 RYTHIMMELWWTQSLKD*SMKVKHR 396
           RYT      WWT  ++    + KHR
Sbjct: 267 RYTPNKSAFWWTLEIEALRKECKHR 291


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,892
Number of Sequences: 2352
Number of extensions: 12757
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)