Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0672
         (571 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    25   0.45 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   3.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.8  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   9.8  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   9.8  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 25.0 bits (52), Expect = 0.45
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -2

Query: 567 SSFLQRFVNCY-PIHIRVINEPN-DLIREQFSIV 472
           SSF Q+F +CY PI      +PN D IR+   ++
Sbjct: 416 SSFFQQFFHCYCPIKFGRKADPNGDYIRKYLPVL 449


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 337  CKPLIQQAMAKIMKANPALYVLRERIRKALQL 432
            CK  IQ  +A+I+    AL ++   +  ALQL
Sbjct: 964  CKSNIQLIVAQILSTGYALIMMAVIVGTALQL 995


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 337  CKPLIQQAMAKIMKANPALYVLRERIRKALQL 432
            CK  IQ  +A+I+    AL ++   +  ALQL
Sbjct: 964  CKSNIQLIVAQILSTGYALIMMAVIVGTALQL 995


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 337  CKPLIQQAMAKIMKANPALYVLRERIRKALQL 432
            CK  IQ  +A+I+    AL ++   +  ALQL
Sbjct: 964  CKSNIQLIVAQILSTGYALIMMAVIVGTALQL 995


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 337  CKPLIQQAMAKIMKANPALYVLRERIRKALQL 432
            CK  IQ  +A+I+    AL ++   +  ALQL
Sbjct: 964  CKSNIQLIVAQILSTGYALIMMAVIVGTALQL 995


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +1

Query: 127 MDNTTTQKYWLDIQLRWGDYDSHDIERYARA 219
           +  TTT   + D+   WG++    ++R  RA
Sbjct: 413 LQKTTTFMNYTDLHDLWGEFTLKALKRLERA 443


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 343 VCNRGTSYRMHCA 305
           VC  G SY + CA
Sbjct: 577 VCRSGLSYHLSCA 589


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 493 NQIIWFVDDTNVYRV 537
           NQ+IWF +  N  R+
Sbjct: 190 NQLIWFDEVVNELRI 204


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 434 ILQNLLNLTSPVRTMENCS 490
           I+ NLL+  +P  T  NC+
Sbjct: 216 IIHNLLSDKNPPNTENNCA 234


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 115 TKDTMDNTTTQKYWLDI 165
           T  T +NT  + YWL++
Sbjct: 44  TNLTYNNTNRKYYWLNV 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,660
Number of Sequences: 336
Number of extensions: 3406
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)