Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0672
         (571 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     26   0.75 
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    26   0.75 
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   7.0  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   9.3  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   9.3  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   9.3  

>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 26.2 bits (55), Expect = 0.75
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 53  PIYYCSQPTSGTCPDHPY*P 112
           P+YY S PT      HPY P
Sbjct: 175 PMYYPSYPTEANFQPHPYYP 194


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 26.2 bits (55), Expect = 0.75
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = -2

Query: 567 SSFLQRFVNCY-PIHIRVINEPN-DLIREQFSIVLTGEVRF 451
           SSF Q+F +CY P+      +PN D IR    ++     RF
Sbjct: 403 SSFFQQFFHCYCPVKFGRKADPNGDYIRRYLPVLKNFPTRF 443


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 8/29 (27%), Positives = 13/29 (44%)
 Frame = +1

Query: 295 AYNLHSAYGNWFPGCKPLIQQAMAKIMKA 381
           AY +    G W P C+P+    +  +  A
Sbjct: 363 AYRVEPGTGRWVPICEPVYSNPINNMKSA 391


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +1

Query: 241 DNMSIYPSPTGLLIAIDLAYNLHSAYGNWFPGCKPL 348
           D     P+P   +I +D     H+A+G +     PL
Sbjct: 312 DRPEAAPAPAPTVITVDRNNGSHNAWGGFIQRAIPL 347


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +2

Query: 416 VKHCNCILQN 445
           ++HC C+LQN
Sbjct: 411 IQHCTCMLQN 420


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +2

Query: 392 CMCFGNVYVKHCNCILQNLLN 454
           C C+     K C C LQN  N
Sbjct: 492 CQCYVGWIGKTCECNLQNSQN 512


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,350
Number of Sequences: 2352
Number of extensions: 14669
Number of successful extensions: 30
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)