Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0672
(571 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 25 0.40
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 2.8
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 22 3.7
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 22 3.7
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 22 3.7
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 21 6.5
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 21 6.5
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 21 8.6
S78458-1|AAB34402.1| 46|Apis mellifera apamin protein. 21 8.6
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 21 8.6
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 8.6
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 21 8.6
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 21 8.6
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 25.4 bits (53), Expect = 0.40
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -2
Query: 567 SSFLQRFVNCY-PIHIRVINEPN-DLIREQFSIVLTGEVRF 451
SSF Q+F +CY P+ +PN D IR ++ R+
Sbjct: 420 SSFFQQFFHCYCPVRFGRKADPNGDYIRRYLPVLKNFPTRY 460
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 22.6 bits (46), Expect = 2.8
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = +2
Query: 164 YSFVGVITILTTS 202
YS++GV+T++ TS
Sbjct: 641 YSYIGVLTLVATS 653
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 22.2 bits (45), Expect = 3.7
Identities = 10/33 (30%), Positives = 14/33 (42%)
Frame = -2
Query: 366 GHRLLNKRFATGEPVTVCTVQVIGQINGDQQTG 268
GHR K TG C V ++ G+ + G
Sbjct: 21 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 53
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 22.2 bits (45), Expect = 3.7
Identities = 10/33 (30%), Positives = 14/33 (42%)
Frame = -2
Query: 366 GHRLLNKRFATGEPVTVCTVQVIGQINGDQQTG 268
GHR K TG C V ++ G+ + G
Sbjct: 37 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 69
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.7
Identities = 10/33 (30%), Positives = 14/33 (42%)
Frame = -2
Query: 366 GHRLLNKRFATGEPVTVCTVQVIGQINGDQQTG 268
GHR K TG C V ++ G+ + G
Sbjct: 94 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 126
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.4 bits (43), Expect = 6.5
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 52 ADILLFSAYKWNVSRPSLLADTKDTMDNTTT 144
AD A+ NVSR S +D K +DN T
Sbjct: 302 ADFPFNFAFIKNVSRDSNSSDFKKLVDNWMT 332
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.4 bits (43), Expect = 6.5
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 52 ADILLFSAYKWNVSRPSLLADTKDTMDNTTT 144
AD A+ NVSR S +D K +DN T
Sbjct: 302 ADFPFNFAFIKNVSRDSNSSDFKKLIDNWMT 332
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 21.0 bits (42), Expect = 8.6
Identities = 10/33 (30%), Positives = 14/33 (42%)
Frame = -2
Query: 366 GHRLLNKRFATGEPVTVCTVQVIGQINGDQQTG 268
GHR K TG C V ++ G+ + G
Sbjct: 94 GHRDFIKNMITGTSQADCAVLIVAAGIGEFEAG 126
>S78458-1|AAB34402.1| 46|Apis mellifera apamin protein.
Length = 46
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 186 VITPTKLYIKPVLLCSC 136
VI T ++ PV+ C+C
Sbjct: 14 VILITSYFVTPVMPCNC 30
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +3
Query: 36 DEFIMRRYITVLSLQVERV 92
D +I R YI VLS +++++
Sbjct: 370 DRYINREYILVLSNKMQKM 388
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 550 VCELLPDTHSCHQRTK*FD*RTILHS 473
+C+LL D+ ++T+ D LHS
Sbjct: 679 ICQLLKDSQYIREQTESDDKEGYLHS 704
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +3
Query: 36 DEFIMRRYITVLSLQVERV 92
D +I R YI VLS +++++
Sbjct: 370 DRYINREYILVLSNKMQKM 388
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +3
Query: 36 DEFIMRRYITVLSLQVERV 92
D +I R YI VLS +++++
Sbjct: 370 DRYINREYILVLSNKMQKM 388
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,811
Number of Sequences: 438
Number of extensions: 4003
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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