Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0671
(325 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 130 5e-32
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 69 1e-13
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 67 5e-13
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 66 1e-12
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 60 1e-10
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 57 8e-10
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 53 1e-08
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 48 3e-07
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 33 0.008
SPAPB1A10.11c |||glutamyl-tRNA synthetase, mitochondrial|Schizos... 24 4.9
SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyc... 24 6.5
SPAC6F12.08c |||exocyst complex subunit Exo84|Schizosaccharomyce... 23 8.6
SPAC13G6.03 |gpi7||GPI anchor biosynthesis protein Gpi7 |Schizos... 23 8.6
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 130 bits (314), Expect = 5e-32
Identities = 64/90 (71%), Positives = 76/90 (84%)
Frame = +3
Query: 45 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMRMLVSGAGDIKITKDGNVL 224
+SLLNPKAE + AQAL VNISAA G+QDV+K+NLGP GT +MLV GAG IK+TKDG VL
Sbjct: 2 LSLLNPKAESIQRAQALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVL 61
Query: 225 LHEMQIQHPTASLIARASTTQNDAPGNGTT 314
L EMQIQ+PTAS IA+A+T Q+DA G+GTT
Sbjct: 62 LTEMQIQNPTASCIAKAATAQDDATGDGTT 91
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 69.3 bits (162), Expect = 1e-13
Identities = 28/71 (39%), Positives = 47/71 (66%)
Frame = +3
Query: 102 NISAAKGIQDVMKTNLGPKGTMRMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARAST 281
NI AAK + DV++T LGP+ ++ML+ G + +T DG+ +L E+++ HP A + +
Sbjct: 24 NIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEVAHPAAKSMIELAR 83
Query: 282 TQNDAPGNGTT 314
TQ++ G+GTT
Sbjct: 84 TQDEEVGDGTT 94
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 67.3 bits (157), Expect = 5e-13
Identities = 28/75 (37%), Positives = 52/75 (69%)
Frame = +3
Query: 90 ALAVNISAAKGIQDVMKTNLGPKGTMRMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIA 269
A+ +I A K + ++++T+LGP+G ++L+S G+I +T DG +L +M+++H A L+
Sbjct: 35 AVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQMEVEHQIAKLLV 94
Query: 270 RASTTQNDAPGNGTT 314
+ S +Q+D G+GTT
Sbjct: 95 QLSKSQDDEIGDGTT 109
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 66.1 bits (154), Expect = 1e-12
Identities = 27/71 (38%), Positives = 45/71 (63%)
Frame = +3
Query: 102 NISAAKGIQDVMKTNLGPKGTMRMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARAST 281
NI AA+ + D ++T+LGPKG +M+ +G G++ +T DG +L + + HP A ++ S
Sbjct: 24 NIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVLHPAAKMLVDLSA 83
Query: 282 TQNDAPGNGTT 314
Q+ G+GTT
Sbjct: 84 AQDVEAGDGTT 94
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 59.7 bits (138), Expect = 1e-10
Identities = 25/71 (35%), Positives = 42/71 (59%)
Frame = +3
Query: 102 NISAAKGIQDVMKTNLGPKGTMRMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARAST 281
N+ A I +V+K++LGP G +MLV GD+ +T DG +L + ++HP ++ +
Sbjct: 26 NVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEHPAGKVLVELAQ 85
Query: 282 TQNDAPGNGTT 314
Q+ G+GTT
Sbjct: 86 QQDKEVGDGTT 96
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 56.8 bits (131), Expect = 8e-10
Identities = 25/74 (33%), Positives = 42/74 (56%)
Frame = +3
Query: 93 LAVNISAAKGIQDVMKTNLGPKGTMRMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIAR 272
L NI+A +QD ++T LGP G +++V G++ I+ DG ++ + I HP A +
Sbjct: 26 LLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDGATIMKLLDIVHPAAKTLVD 85
Query: 273 ASTTQNDAPGNGTT 314
+ Q+ G+GTT
Sbjct: 86 IARAQDAEVGDGTT 99
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 52.8 bits (121), Expect = 1e-08
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +3
Query: 78 RAAQALAVNISAAKGIQDVMKTNLGPKGTMRMLVSGA-GDIKITKDGNVLLHEMQIQHPT 254
R A + A + D++K+ LGPKG ++L S + GDI +T DG +L + + +
Sbjct: 17 RGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATILKSIALDNAA 76
Query: 255 ASLIARASTTQNDAPGNGTT 314
A ++ S Q+D G+GTT
Sbjct: 77 AKVLVNISKVQDDEVGDGTT 96
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 48.4 bits (110), Expect = 3e-07
Identities = 20/76 (26%), Positives = 42/76 (55%)
Frame = +3
Query: 90 ALAVNISAAKGIQDVMKTNLGPKGTMRMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIA 269
A+ N +A + + ++ +T+LGP G +++V+ +T D ++ E+++ HP A L+
Sbjct: 27 AVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELEVIHPAAKLVV 86
Query: 270 RASTTQNDAPGNGTTF 317
A+ Q + G+ F
Sbjct: 87 DATQQQENELGDAANF 102
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 33.5 bits (73), Expect = 0.008
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +3
Query: 135 MKTNLGPKGTMRMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIAR----ASTTQNDAPG 302
+ LGPKG ++ G KITKDG + + ++ +L AR ++ N+ G
Sbjct: 58 VSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSLKDKFENLGARLVQDVASKTNEVAG 117
Query: 303 NGTT 314
+GTT
Sbjct: 118 DGTT 121
>SPAPB1A10.11c |||glutamyl-tRNA synthetase,
mitochondrial|Schizosaccharomyces pombe|chr 1|||Manual
Length = 526
Score = 24.2 bits (50), Expect = 4.9
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -3
Query: 248 VLDLHLM*QNIAILGDLYVPST-RNQHPHRAFGTK 147
V+D HLM I G+ +VPST ++ + AFG K
Sbjct: 227 VVDDHLMHITHVIRGEEWVPSTIKHIQLYEAFGWK 261
>SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 791
Score = 23.8 bits (49), Expect = 6.5
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 33 EMAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGT 164
E A ISL+ ++ + +N S+ + D+ TN+ PK T
Sbjct: 149 EDAVISLVEADSQESDTESLPEINDSSDVSLSDLPSTNVTPKKT 192
>SPAC6F12.08c |||exocyst complex subunit Exo84|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 23.4 bits (48), Expect = 8.6
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 149 WSQRHDEDVGF 181
WS++HDED+ F
Sbjct: 308 WSRKHDEDLEF 318
>SPAC13G6.03 |gpi7||GPI anchor biosynthesis protein Gpi7
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 23.4 bits (48), Expect = 8.6
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Frame = +3
Query: 9 IETENVLNEMAAISL-----LNPKAEFARAAQALAVNI 107
IE E+V+ AA+SL LNPK A + Q ++I
Sbjct: 451 IEEEHVIWYFAAVSLSLLQLLNPKTRLAGSLQLFCLSI 488
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,337,592
Number of Sequences: 5004
Number of extensions: 24473
Number of successful extensions: 64
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 87815546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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