Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0671
(325 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 148 8e-37
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 148 8e-37
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 75 2e-14
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 75 2e-14
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 71 3e-13
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 68 1e-12
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 68 1e-12
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 68 1e-12
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 65 1e-11
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 65 1e-11
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 63 4e-11
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 63 4e-11
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 63 4e-11
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 52 7e-08
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 52 7e-08
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 48 2e-06
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 38 0.001
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 38 0.001
Z49913-5|CAA90146.1| 404|Caenorhabditis elegans Hypothetical pr... 28 1.3
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr... 27 2.3
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 27 4.1
U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical pr... 26 5.4
AC024776-7|AAK68469.1| 411|Caenorhabditis elegans Nuclear pore ... 26 5.4
AC024776-5|AAK68470.3| 1090|Caenorhabditis elegans Nuclear pore ... 26 5.4
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 148 bits (359), Expect = 8e-37
Identities = 69/95 (72%), Positives = 83/95 (87%)
Frame = +3
Query: 36 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMRMLVSGAGDIKITKDG 215
M++I LNPKAE AR A AL +NIS A+G+QDVM++NLGPKGT++MLVSGAGDIK+TKDG
Sbjct: 1 MSSIQCLNPKAELARHAAALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDG 60
Query: 216 NVLLHEMQIQHPTASLIARASTTQNDAPGNGTTFT 320
NVLLHEM IQHPTAS+IA+AST Q+D G+GTT T
Sbjct: 61 NVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTST 95
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 148 bits (359), Expect = 8e-37
Identities = 69/95 (72%), Positives = 83/95 (87%)
Frame = +3
Query: 36 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMRMLVSGAGDIKITKDG 215
M++I LNPKAE AR A AL +NIS A+G+QDVM++NLGPKGT++MLVSGAGDIK+TKDG
Sbjct: 1 MSSIQCLNPKAELARHAAALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDG 60
Query: 216 NVLLHEMQIQHPTASLIARASTTQNDAPGNGTTFT 320
NVLLHEM IQHPTAS+IA+AST Q+D G+GTT T
Sbjct: 61 NVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTST 95
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 74.5 bits (175), Expect = 2e-14
Identities = 32/71 (45%), Positives = 48/71 (67%)
Frame = +3
Query: 102 NISAAKGIQDVMKTNLGPKGTMRMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARAST 281
NI AAK + D ++T+LGP+G +M+ SG GD+ IT DG +L++M + HPTA ++ S
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSK 95
Query: 282 TQNDAPGNGTT 314
Q+ G+GTT
Sbjct: 96 AQDIEAGDGTT 106
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 74.5 bits (175), Expect = 2e-14
Identities = 32/71 (45%), Positives = 48/71 (67%)
Frame = +3
Query: 102 NISAAKGIQDVMKTNLGPKGTMRMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARAST 281
NI AAK + D ++T+LGP+G +M+ SG GD+ IT DG +L++M + HPTA ++ S
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSK 95
Query: 282 TQNDAPGNGTT 314
Q+ G+GTT
Sbjct: 96 AQDIEAGDGTT 106
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 70.5 bits (165), Expect = 3e-13
Identities = 30/71 (42%), Positives = 48/71 (67%)
Frame = +3
Query: 102 NISAAKGIQDVMKTNLGPKGTMRMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARAST 281
NI+A K I DV++T+LGP+ ++ML+ G I +T DGN +L E+ ++HP A + +
Sbjct: 28 NINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILREITVKHPAAKSMIEIAR 87
Query: 282 TQNDAPGNGTT 314
TQ++ G+GTT
Sbjct: 88 TQDEETGDGTT 98
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 68.1 bits (159), Expect = 1e-12
Identities = 30/76 (39%), Positives = 50/76 (65%)
Frame = +3
Query: 87 QALAVNISAAKGIQDVMKTNLGPKGTMRMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 266
+A+ +I AA+ + + ++T+LGP+G +MLVS GD+ IT DG ++ +M +QH A L+
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLM 92
Query: 267 ARASTTQNDAPGNGTT 314
S +Q+ G+GTT
Sbjct: 93 VELSKSQDHEIGDGTT 108
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 68.1 bits (159), Expect = 1e-12
Identities = 30/76 (39%), Positives = 50/76 (65%)
Frame = +3
Query: 87 QALAVNISAAKGIQDVMKTNLGPKGTMRMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 266
+A+ +I AA+ + + ++T+LGP+G +MLVS GD+ IT DG ++ +M +QH A L+
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLM 92
Query: 267 ARASTTQNDAPGNGTT 314
S +Q+ G+GTT
Sbjct: 93 VELSKSQDHEIGDGTT 108
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 68.1 bits (159), Expect = 1e-12
Identities = 30/76 (39%), Positives = 50/76 (65%)
Frame = +3
Query: 87 QALAVNISAAKGIQDVMKTNLGPKGTMRMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 266
+A+ +I AA+ + + ++T+LGP+G +MLVS GD+ IT DG ++ +M +QH A L+
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLM 92
Query: 267 ARASTTQNDAPGNGTT 314
S +Q+ G+GTT
Sbjct: 93 VELSKSQDHEIGDGTT 108
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 65.3 bits (152), Expect = 1e-11
Identities = 25/71 (35%), Positives = 47/71 (66%)
Frame = +3
Query: 102 NISAAKGIQDVMKTNLGPKGTMRMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARAST 281
N++AA I +++K++LGP G +MLV GD+ +T DG +L +++++HP ++ +
Sbjct: 25 NVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQ 84
Query: 282 TQNDAPGNGTT 314
Q++ G+GTT
Sbjct: 85 LQDEEVGDGTT 95
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 65.3 bits (152), Expect = 1e-11
Identities = 25/71 (35%), Positives = 47/71 (66%)
Frame = +3
Query: 102 NISAAKGIQDVMKTNLGPKGTMRMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARAST 281
N++AA I +++K++LGP G +MLV GD+ +T DG +L +++++HP ++ +
Sbjct: 25 NVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQ 84
Query: 282 TQNDAPGNGTT 314
Q++ G+GTT
Sbjct: 85 LQDEEVGDGTT 95
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 63.3 bits (147), Expect = 4e-11
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Frame = +3
Query: 36 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMRMLVSG----AGDIKI 203
M + +L A+ R A + A I D++K+ LGPKG ++L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 204 TKDGNVLLHEMQIQHPTASLIARASTTQNDAPGNGTT 314
T DG +L + + +P A ++ S TQ+ G+GTT
Sbjct: 61 TNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTT 97
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 63.3 bits (147), Expect = 4e-11
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Frame = +3
Query: 36 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMRMLVSG----AGDIKI 203
M + +L A+ R A + A I D++K+ LGPKG ++L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 204 TKDGNVLLHEMQIQHPTASLIARASTTQNDAPGNGTT 314
T DG +L + + +P A ++ S TQ+ G+GTT
Sbjct: 61 TNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTT 97
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 63.3 bits (147), Expect = 4e-11
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Frame = +3
Query: 36 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMRMLVSG----AGDIKI 203
M + +L A+ R A + A I D++K+ LGPKG ++L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 204 TKDGNVLLHEMQIQHPTASLIARASTTQNDAPGNGTT 314
T DG +L + + +P A ++ S TQ+ G+GTT
Sbjct: 61 TNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTT 97
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 52.4 bits (120), Expect = 7e-08
Identities = 28/90 (31%), Positives = 47/90 (52%)
Frame = +3
Query: 45 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMRMLVSGAGDIKITKDGNVL 224
I LL E + + NI+A + + D ++T LGP+G +++V G I+ DG +
Sbjct: 6 IILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATI 65
Query: 225 LHEMQIQHPTASLIARASTTQNDAPGNGTT 314
L + I P AS + + +Q+ G+GTT
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTT 95
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 52.4 bits (120), Expect = 7e-08
Identities = 28/90 (31%), Positives = 47/90 (52%)
Frame = +3
Query: 45 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMRMLVSGAGDIKITKDGNVL 224
I LL E + + NI+A + + D ++T LGP+G +++V G I+ DG +
Sbjct: 6 IILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATI 65
Query: 225 LHEMQIQHPTASLIARASTTQNDAPGNGTT 314
L + I P AS + + +Q+ G+GTT
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTT 95
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 47.6 bits (108), Expect = 2e-06
Identities = 23/80 (28%), Positives = 41/80 (51%)
Frame = +3
Query: 72 FARAAQALAVNISAAKGIQDVMKTNLGPKGTMRMLVSGAGDIKITKDGNVLLHEMQIQHP 251
F +A+ NI A + +++ GP G +M+++ + +T D +L E++IQHP
Sbjct: 21 FKGTDEAVQRNIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILKELEIQHP 80
Query: 252 TASLIARASTTQNDAPGNGT 311
A +I A+ Q G+ T
Sbjct: 81 AARIIIMATEMQEKQIGDNT 100
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 38.3 bits (85), Expect = 0.001
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +3
Query: 75 ARAAQALAVNISAAKGIQDVMKTNLGPKGTMRMLVSGAGDIKITKDGNVLLHEMQI---- 242
A QA+ V ++ + D + +GPKG ++ G KITKDG + + +
Sbjct: 25 AEGRQAMLVGVNL---LADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKY 81
Query: 243 QHPTASLIARASTTQNDAPGNGTT 314
Q+ A LI + N+ G+GTT
Sbjct: 82 QNLGAKLIQDVANKANEEAGDGTT 105
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 38.3 bits (85), Expect = 0.001
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +3
Query: 75 ARAAQALAVNISAAKGIQDVMKTNLGPKGTMRMLVSGAGDIKITKDGNVLLHEMQI---- 242
A QA+ V ++ + D + +GPKG ++ G KITKDG + + +
Sbjct: 25 AEGRQAMLVGVNL---LADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKY 81
Query: 243 QHPTASLIARASTTQNDAPGNGTT 314
Q+ A LI + N+ G+GTT
Sbjct: 82 QNLGAKLIQDVANKANEEAGDGTT 105
>Z49913-5|CAA90146.1| 404|Caenorhabditis elegans Hypothetical
protein ZK938.7 protein.
Length = 404
Score = 28.3 bits (60), Expect = 1.3
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -1
Query: 262 SEAVGCWICISCNKTLPSLVIFMSPAPETNILIVPLGPRLV 140
+E V CW CN+ L + + + P T+ +++P R V
Sbjct: 61 TEVVRCWDSFKCNQKLEFVRLKNTITPTTSSILIPCTRRTV 101
>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical
protein C06B8.7 protein.
Length = 3118
Score = 27.5 bits (58), Expect = 2.3
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2
Query: 164 DEDVGFWCWGHKDHQGW 214
++D+G +CWG GW
Sbjct: 226 EDDIGIYCWGPPTFTGW 242
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 249 PTASLIARASTTQNDAPGNGTTF 317
PTA L +STT AP G+ F
Sbjct: 401 PTAGLFGASSTTTTSAPATGSLF 423
>U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical
protein F21H12.6 protein.
Length = 1374
Score = 26.2 bits (55), Expect = 5.4
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -1
Query: 241 ICISCNKTLPSLVIFMSPAPETNILIVPLGPRLVFITS 128
I +S + +L SLV+ + P + + PLGPR +F+TS
Sbjct: 837 IDVSPSISLKSLVVSLKPQ---SAKVEPLGPRDMFLTS 871
>AC024776-7|AAK68469.1| 411|Caenorhabditis elegans Nuclear pore
complex protein protein8, isoform a protein.
Length = 411
Score = 26.2 bits (55), Expect = 5.4
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 30 NEMAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMRM 173
+E + S+ + KA A + AL + + AKG++ + GP+ TM M
Sbjct: 307 DETSFHSITSIKALEASQSAALNLVATTAKGVRLYFSVSTGPQSTMAM 354
>AC024776-5|AAK68470.3| 1090|Caenorhabditis elegans Nuclear pore
complex protein protein8, isoform b protein.
Length = 1090
Score = 26.2 bits (55), Expect = 5.4
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 30 NEMAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMRM 173
+E + S+ + KA A + AL + + AKG++ + GP+ TM M
Sbjct: 222 DETSFHSITSIKALEASQSAALNLVATTAKGVRLYFSVSTGPQSTMAM 269
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,483,511
Number of Sequences: 27780
Number of extensions: 145007
Number of successful extensions: 325
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 322
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 387641448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -