Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0668
         (775 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X15949-1|CAA34073.1|  349|Homo sapiens protein ( Human mRNA for ...    32   2.0  
CR457077-1|CAG33358.1|  349|Homo sapiens IRF2 protein.                 32   2.0  
BT007264-1|AAP35928.1|  349|Homo sapiens interferon regulatory f...    32   2.0  
BC015803-1|AAH15803.1|  349|Homo sapiens interferon regulatory f...    32   2.0  

>X15949-1|CAA34073.1|  349|Homo sapiens protein ( Human mRNA for
           interferon regulatory factor-2 (IRF-2). ).
          Length = 349

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = -2

Query: 588 LPQVTPRGEASVKKVSLSYSLYHQLPVSESPVKIG--PAVPEISRNKHTDRE 439
           LP +    + S+KK + ++ +Y  LP+SE P K G  P   +  + KH  +E
Sbjct: 88  LPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSKKGKKPKTEKEDKVKHIKQE 139


>CR457077-1|CAG33358.1|  349|Homo sapiens IRF2 protein.
          Length = 349

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = -2

Query: 588 LPQVTPRGEASVKKVSLSYSLYHQLPVSESPVKIG--PAVPEISRNKHTDRE 439
           LP +    + S+KK + ++ +Y  LP+SE P K G  P   +  + KH  +E
Sbjct: 88  LPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSKKGKKPKTEKEDKVKHIKQE 139


>BT007264-1|AAP35928.1|  349|Homo sapiens interferon regulatory
           factor 2 protein.
          Length = 349

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = -2

Query: 588 LPQVTPRGEASVKKVSLSYSLYHQLPVSESPVKIG--PAVPEISRNKHTDRE 439
           LP +    + S+KK + ++ +Y  LP+SE P K G  P   +  + KH  +E
Sbjct: 88  LPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSKKGKKPKTEKEDKVKHIKQE 139


>BC015803-1|AAH15803.1|  349|Homo sapiens interferon regulatory
           factor 2 protein.
          Length = 349

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = -2

Query: 588 LPQVTPRGEASVKKVSLSYSLYHQLPVSESPVKIG--PAVPEISRNKHTDRE 439
           LP +    + S+KK + ++ +Y  LP+SE P K G  P   +  + KH  +E
Sbjct: 88  LPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSKKGKKPKTEKEDKVKHIKQE 139


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,191,700
Number of Sequences: 237096
Number of extensions: 1884861
Number of successful extensions: 3921
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3916
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)