Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0667
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    25   0.57 
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    24   1.3  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   7.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.0  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   7.0  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   7.0  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   9.2  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   9.2  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   9.2  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   9.2  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   9.2  

>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 319 PNSTQLQVLRNSGKCKSAAAGENGM 393
           PN  Q QV+ +S K ++AA  +NG+
Sbjct: 126 PNGHQTQVVYDSCKLQAAAVTQNGV 150


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 319 PNSTQLQVLRNSGKCKSAAAGENGM 393
           PN  Q QV+  S K ++AA  +NG+
Sbjct: 124 PNGHQTQVVYASCKLQAAAVTQNGV 148


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 11/47 (23%), Positives = 22/47 (46%)
 Frame = +1

Query: 151 QKALVENTMVPCINSKPYQYTELLMTLPDLASHFFPRVSLTTCRAML 291
           ++ +V+  +   I   P    ++ MTL  L+    P   + TC A++
Sbjct: 162 EEKIVKGKLQCWIEFHPQWKWQVYMTLVSLSLFIIPASIIATCYAII 208


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +2

Query: 335 FKFCATLASASRRPPARTGW 394
           F FC    S S RP +  GW
Sbjct: 551 FAFCYCYYSISIRPISTLGW 570


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 279 AGGERDAREEVAGEVRQ 229
           AGGE + R++  GE+ Q
Sbjct: 29  AGGENEPRKQDIGEILQ 45


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 11/45 (24%), Positives = 20/45 (44%)
 Frame = +1

Query: 76  SVDTRKRLTPIPDINTTGNHTPYKVQKALVENTMVPCINSKPYQY 210
           +V+ +K    +     TGN TP+    + +  T  P  +   YQ+
Sbjct: 235 TVNIKKESPQMQSYRPTGNITPHGSNTSSLITTPSPSASPLAYQH 279


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax
          protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 31 PPQVTGTMNGHSTSHS 78
          PP++TG+ NG   + S
Sbjct: 41 PPELTGSTNGDGGARS 56


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 432 QHVMHDVTDLNQRHP 388
           QHVMH+++ + Q  P
Sbjct: 178 QHVMHNLSSVPQPQP 192


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 31  PPQVTGTMNGHSTSHS 78
           PP++TG+ NG   + S
Sbjct: 197 PPELTGSTNGDGGARS 212


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 432 QHVMHDVTDLNQRHP 388
           QHVMH+++ + Q  P
Sbjct: 178 QHVMHNLSSVPQPQP 192


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 432 QHVMHDVTDLNQRHP 388
           QHVMH+++ + Q  P
Sbjct: 178 QHVMHNLSSVPQPQP 192


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,371
Number of Sequences: 336
Number of extensions: 2144
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)