Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0663
         (749 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q31IQ0 Cluster: Integrase/transposase family protein; n...    33   5.7  

>UniRef50_Q31IQ0 Cluster: Integrase/transposase family protein; n=1;
           Thiomicrospira crunogena XCL-2|Rep:
           Integrase/transposase family protein - Thiomicrospira
           crunogena (strain XCL-2)
          Length = 636

 Score = 33.5 bits (73), Expect = 5.7
 Identities = 21/76 (27%), Positives = 37/76 (48%)
 Frame = -2

Query: 304 FPANSTPLGAFLYSDLECQRTEVVTCLDYSHVRGGLIRPHRLLDRLFIGFRNQLMCIRKT 125
           F  N   LG  L  D        V CL+Y++ +G  I  HR   R+   ++NQ +   + 
Sbjct: 505 FKVNPYDLGEILVFDSRELVYITVPCLEYNYAKGTSIYEHREYKRIARKYKNQKL-NNQD 563

Query: 124 VAMHRLFLENQRDILR 77
           + + ++  +N+RD +R
Sbjct: 564 LMLAKIRQKNERDKIR 579


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 748,308,243
Number of Sequences: 1657284
Number of extensions: 15219522
Number of successful extensions: 26873
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 26116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26868
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)