Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0663
         (749 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    24   1.5  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   6.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.0  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   8.0  

>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = +2

Query: 320 LTKTRKNSWINR*I*CCELLNSGDRNKAVNFLKIYAAKWW 439
           +T+T KN  +      CE     D +K    L I+   WW
Sbjct: 62  ITETMKNGCVK-----CEQKQKEDVHKVFQHLMIHRPNWW 96


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +3

Query: 273 NAPNGVLFAGKS 308
           + PNG++FAGK+
Sbjct: 57  DCPNGLVFAGKN 68


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -1

Query: 617 IFYLSRFTCTHWLGYDLVLILC 552
           IF +    CT++  Y  +++LC
Sbjct: 91  IFTVHFLLCTYYFYYAFIILLC 112


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 593 CTHWLGYDLVLILC 552
           C H L YDL L +C
Sbjct: 475 CNHGLVYDLELNIC 488


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,848
Number of Sequences: 336
Number of extensions: 4421
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)