Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0663
         (749 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1177 + 11125945-11126242,11126465-11128303,11128342-11128358     30   2.3  
10_06_0104 + 10786613-10788040                                         29   3.0  
02_04_0624 + 24538095-24538183,24538429-24538612,24538725-245388...    29   3.0  
08_02_0914 - 22546100-22546759                                         28   6.9  
04_03_0948 - 21021021-21021040,21022743-21022818,21023167-210232...    28   6.9  

>07_01_1177 + 11125945-11126242,11126465-11128303,11128342-11128358
          Length = 717

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = -2

Query: 334 SCFG*NLGEDFPANS-TPLGAFLYSDLECQRTEVVTCLDYSHVRGGLIRPHRLLDRLFIG 158
           +C+  N     P N  TP+  +     +  +  V  C  Y+HV  G + P R +  LF+G
Sbjct: 547 ACYLINRSPSIPLNKKTPIEVWSGMPADYSQLRVFGCTAYAHVDNGKLEP-RAIKCLFLG 605

Query: 157 F 155
           +
Sbjct: 606 Y 606


>10_06_0104 + 10786613-10788040
          Length = 475

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 468 NFGGKFYTTDSLHPWPF 518
           +FGGK Y   SL+ WPF
Sbjct: 295 SFGGKLYVPQSLYSWPF 311


>02_04_0624 +
           24538095-24538183,24538429-24538612,24538725-24538886,
           24538988-24539225,24539301-24539370,24539439-24539530,
           24539799-24539836,24540018-24540039,24540462-24540618,
           24540702-24540753,24542144-24542207,24542279-24542362,
           24543418-24543543,24543622-24543818,24543903-24544091,
           24544186-24544434,24544507-24544556,24544977-24545059,
           24545164-24545449,24545751-24545794,24545878-24546626
          Length = 1074

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = -2

Query: 220 YSHVRGGLIRPHRLLDRLFIGFRNQLMCIRKTVAMHRLFLENQRDILRKT 71
           Y+  R   +   RL   +F+G+ N  +C++    +  LFL+    IL  T
Sbjct: 280 YAPARNDFLFERRLQSFIFVGYHNGGLCLKDRSVVEGLFLKGDIQILCTT 329


>08_02_0914 - 22546100-22546759
          Length = 219

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = -2

Query: 316 LGEDFPANSTPLGAFLYSDLECQRTEVVTCLDYSHVRGGLIRPHRLL 176
           L +DF   + PLGA   S  +C+    VT  D+    G L RP  L+
Sbjct: 27  LTQDFCVANLPLGADTPSGYQCRPAATVTAADF--YSGALARPGILI 71


>04_03_0948 -
           21021021-21021040,21022743-21022818,21023167-21023214,
           21023655-21023745,21024524-21024636,21024718-21024778,
           21025816-21026007,21026029-21026762
          Length = 444

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 323 TKTRKNSWINR*I*CCELLNSGDRNKAV 406
           T T+  S I   I CCE+L+ GD +K V
Sbjct: 333 TNTQYRSSIGNWIQCCEILSEGDSDKPV 360


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,449,632
Number of Sequences: 37544
Number of extensions: 396202
Number of successful extensions: 670
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 670
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)