Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0662
(721 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 36 0.033
SB_42749| Best HMM Match : zf-CCHC (HMM E-Value=0.0051) 36 0.044
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 32 0.54
SB_24975| Best HMM Match : ET (HMM E-Value=1) 31 0.94
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098) 30 2.2
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 29 3.8
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_42963| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 29 5.0
SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_10933| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 28 6.6
SB_46249| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_34458| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 28 8.8
SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 28 8.8
SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32) 28 8.8
SB_13237| Best HMM Match : zf-CCHC (HMM E-Value=0.0076) 28 8.8
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 35.9 bits (79), Expect = 0.033
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Frame = +3
Query: 276 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIA-- 449
TT +T +T+ T ++ + A S + +P P + +AP + P T +A
Sbjct: 2230 TTMVPETTAAPATTAALETSIVPETTAASETTVAPETPDAPATTLAPETTAAPETTVAPE 2289
Query: 450 SGPLGATTY---TTPFVQTVPIASTASLPVATHLIKKRSAP 563
+ ATT TT ++T A T +P T ++ SAP
Sbjct: 2290 TTDAPATTLAPKTTTALETTVEAKTTVVPETTPALETTSAP 2330
Score = 29.5 bits (63), Expect = 2.9
Identities = 24/97 (24%), Positives = 39/97 (40%)
Frame = +3
Query: 276 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG 455
TT +T + T+ + L + A + S P + +AP + + P T +A G
Sbjct: 2134 TTVATETTVAPETTAAPESTLAPEITAAPDTTMVPESTVAPETTVAPETTVVPETTLAPG 2193
Query: 456 PLGATTYTTPFVQTVPIASTASLPVATHLIKKRSAPV 566
A TT +T T P T ++ +APV
Sbjct: 2194 TTVAQE-TTVAPETTVAPETTVAPETTAALETTAAPV 2229
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/96 (22%), Positives = 38/96 (39%)
Frame = +3
Query: 276 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG 455
TT +T + TS T ++ + + A + + PV+ +AP + P T A
Sbjct: 17 TTVAPETTAVLETSAAPETTMVPETTSAPATTMAPETTAAPVTTMAPETTAAPATTTAL- 75
Query: 456 PLGATTYTTPFVQTVPIASTASLPVATHLIKKRSAP 563
TT ++T + T P T + +AP
Sbjct: 76 ETTMVPETTAALETTVASETTDAPATTLATETTAAP 111
Score = 28.7 bits (61), Expect = 5.0
Identities = 23/96 (23%), Positives = 39/96 (40%)
Frame = +3
Query: 276 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG 455
TT +T +T+ V T ++ + A S + + P + +AP + T +A+
Sbjct: 739 TTMVPETTAAPATTAVLETSIVPETTAASETTVAPETTDAPATTLAPKTTTALETTVAA- 797
Query: 456 PLGATTYTTPFVQTVPIASTASLPVATHLIKKRSAP 563
TT +T P T S P +T + AP
Sbjct: 798 ------KTTVVPETTPALETTSAPESTAATESTVAP 827
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/96 (22%), Positives = 38/96 (39%)
Frame = +3
Query: 276 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG 455
TT +T + TS T ++ + + A + + PV+ +AP + P T A
Sbjct: 1092 TTVAPETTAVLETSAAPETTMVPETTSAPATTMAPETTAAPVTTMAPETTAAPATTTAL- 1150
Query: 456 PLGATTYTTPFVQTVPIASTASLPVATHLIKKRSAP 563
TT ++T + T P T + +AP
Sbjct: 1151 ETTMVPETTAALETTVASETTDAPATTLATETTAAP 1186
Score = 27.9 bits (59), Expect = 8.8
Identities = 24/97 (24%), Positives = 40/97 (41%)
Frame = +3
Query: 276 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG 455
TT +T + + T+ +T L ++ A + + P + +AP + T +A
Sbjct: 83 TTAALETTVASETTDAPATTLATETTAAPETTVAPETTDLPATTLAPETTAAQETTVAPE 142
Query: 456 PLGATTYTTPFVQTVPIASTASLPVATHLIKKRSAPV 566
A T TVP +TA+ P T +APV
Sbjct: 143 TTAAPETTVAPESTVPPETTAA-PDTTVAPGTTAAPV 178
Score = 27.9 bits (59), Expect = 8.8
Identities = 24/97 (24%), Positives = 40/97 (41%)
Frame = +3
Query: 276 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG 455
TT +T + + T+ +T L ++ A + + P + +AP + T +A
Sbjct: 1158 TTAALETTVASETTDAPATTLATETTAAPETTVAPETTDLPATTLAPETTAAQETTVAPE 1217
Query: 456 PLGATTYTTPFVQTVPIASTASLPVATHLIKKRSAPV 566
A T TVP +TA+ P T +APV
Sbjct: 1218 TTAAPETTVAPESTVPPETTAA-PDTTVAPGTTAAPV 1253
>SB_42749| Best HMM Match : zf-CCHC (HMM E-Value=0.0051)
Length = 401
Score = 35.5 bits (78), Expect = 0.044
Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Frame = -3
Query: 614 GRAAGVSSRSGVSCGQNGCRPLLDQMSCD--GK*CSRCDRHGLHEGCCVGSGSKRATCDV 441
G+ G + R C G L + C GK C+ C CC G K+ V
Sbjct: 228 GKPGGTNPRQAAKCKFCGYSHTLKKEFCKAWGKRCNNCKAPNHFSSCCPSLGGKKQVHTV 287
Query: 440 GVGSDVGARSDV 405
G GSD + +++
Sbjct: 288 GDGSDSDSSAEM 299
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 34.3 bits (75), Expect = 0.10
Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = +3
Query: 294 TPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTY-IASGPLGAT 470
TP ST STP + + I +P P + AP + ITP+T S P +
Sbjct: 137 TPSTPSTPSTPSTPSTPSTPSTPSTPITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPS 196
Query: 471 TYTTPFVQTVP-IASTASLPVATHLIKKRSAP 563
T +TP + P ST S+P + S P
Sbjct: 197 TRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTP 228
Score = 33.5 bits (73), Expect = 0.18
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Frame = +3
Query: 294 TPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTY-IASGPLGAT 470
TP ST + +TP + + I +P P + AP + ITP+T S P +
Sbjct: 687 TPSTPSTPSMPNTPSTPSTPSTPSTPITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPS 746
Query: 471 TYTTPFVQTVP-IASTASLPVATHLIKKRSAP 563
T +TP + P ST S+P + S P
Sbjct: 747 TRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTP 778
Score = 32.3 bits (70), Expect = 0.41
Identities = 27/90 (30%), Positives = 37/90 (41%)
Frame = +3
Query: 294 TPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASGPLGATT 473
TP T STP + + I +P P ++ PS+ TP+T S P +T
Sbjct: 26 TPSTPRTPSTPSTPCTPSTPSTPSTPITPSTPSTPCTHSTPSAPSTPST--PSTPCTPST 83
Query: 474 YTTPFVQTVPIASTASLPVATHLIKKRSAP 563
+TP + P ST S P A S P
Sbjct: 84 PSTPSTPSTP--STPSTPSAPSTPSTPSTP 111
Score = 29.9 bits (64), Expect = 2.2
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +3
Query: 294 TPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG-PLGAT 470
TP ST STP + S+ +P P + P + TP+T A G P +
Sbjct: 472 TPSTPSTPSTPSTPSTPSTPSTSSTPSTPSTPSTPSAPGTPGTPSTPSTPSAPGTPSTPS 531
Query: 471 TYTTPFVQTVP-IASTASLP 527
T +TP + P ST S+P
Sbjct: 532 TPSTPSTPSTPSTPSTPSMP 551
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 366 HFIKKRSPQWPVSYIAPSSYITPNT-YIASGPLGATTYTTPFVQTVPIA-STASLPVATH 539
H +K +P P + PS+ TP+T S P T +TP + PI ST S P TH
Sbjct: 5 HRLKLSTPSTPCTPSTPSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPSTPSTP-CTH 63
Score = 29.5 bits (63), Expect = 2.9
Identities = 24/78 (30%), Positives = 34/78 (43%)
Frame = +3
Query: 294 TPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASGPLGATT 473
TP ST STP ++ + +P P + PS+ TP T S P +T
Sbjct: 194 TPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTPSTPSTPSTLSTPIT--PSTPSTPST 251
Query: 474 YTTPFVQTVPIASTASLP 527
+TP + + P ST S P
Sbjct: 252 PSTPSMPSTP--STPSTP 267
Score = 29.5 bits (63), Expect = 2.9
Identities = 24/78 (30%), Positives = 34/78 (43%)
Frame = +3
Query: 294 TPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASGPLGATT 473
TP ST STP ++ + +P P + PS+ TP T S P +T
Sbjct: 744 TPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTPSTPSTPSTLSTPIT--PSTPSTPST 801
Query: 474 YTTPFVQTVPIASTASLP 527
+TP + + P ST S P
Sbjct: 802 PSTPSMPSTP--STPSTP 817
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 31.9 bits (69), Expect = 0.54
Identities = 25/96 (26%), Positives = 39/96 (40%)
Frame = +3
Query: 276 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG 455
TT +T TS T ++ Q + A + + P + +AP + + P T +A
Sbjct: 2942 TTAAPETTAAPETSAAPDTTMVPQTTSAPATTMAPETTLAPETTLAPETTMAPETTMAPE 3001
Query: 456 PLGATTYTTPFVQTVPIASTASLPVATHLIKKRSAP 563
A TT QT A T + P T + + S P
Sbjct: 3002 TTVAAE-TTAAAQTTVAAETTAAPETTIVPETTSVP 3036
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/96 (22%), Positives = 38/96 (39%)
Frame = +3
Query: 276 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG 455
TT +T + TS T ++ + + A + + PV+ +AP + P T A
Sbjct: 2344 TTVAPETTAVLETSAAPETTMVPETTSAPATTMAPETTAAPVTTMAPETTAAPATTTAL- 2402
Query: 456 PLGATTYTTPFVQTVPIASTASLPVATHLIKKRSAP 563
TT ++T + T P T + +AP
Sbjct: 2403 ETTMVPETTAALETTVASETTDAPATTLATETTAAP 2438
Score = 27.9 bits (59), Expect = 8.8
Identities = 24/95 (25%), Positives = 39/95 (41%)
Frame = +3
Query: 276 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG 455
TT +T + T+ T + + A + + + P + IAP + P T +A G
Sbjct: 396 TTMAPETTIAPETTMAPETTIAPETTAVPGTMVPETTAA-PATIIAPETTAAPETTMAPG 454
Query: 456 PLGATTYTTPFVQTVPIASTASLPVATHLIKKRSA 560
A TT +T A A+ P T + K +A
Sbjct: 455 TTAAPE-TTMAPETT-AAPEATAPPETSMAPKTTA 487
Score = 27.9 bits (59), Expect = 8.8
Identities = 24/97 (24%), Positives = 40/97 (41%)
Frame = +3
Query: 276 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG 455
TT +T + + T+ +T L ++ A + + P + +AP + T +A
Sbjct: 2410 TTAALETTVASETTDAPATTLATETTAAPETTVAPETTDLPATTLAPETTAAQETTVAPE 2469
Query: 456 PLGATTYTTPFVQTVPIASTASLPVATHLIKKRSAPV 566
A T TVP +TA+ P T +APV
Sbjct: 2470 TTAAPETTVAPESTVPPETTAA-PDTTVAPGTTAAPV 2505
>SB_24975| Best HMM Match : ET (HMM E-Value=1)
Length = 316
Score = 31.1 bits (67), Expect = 0.94
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +3
Query: 297 PLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIA-SGPLGATT 473
PL ++TPL ++ + +P P + + S +TPNT ++ S + A+
Sbjct: 80 PLKHRVPVTTNTPLSPSASVTASVSVTPNTPLSPSASVTASVSVTPNTPLSLSASVTASV 139
Query: 474 YTTPFVQTVPIAS-TASLPVATHL 542
TP P AS TAS+ V ++
Sbjct: 140 SVTPNTPQSPSASVTASVSVTPNI 163
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +3
Query: 378 KRSPQWPVSYIAPSSYITPNTYIASGPLGATTYTTPFVQTVPIASTASLPVATHLIKKRS 557
K++ PVS ++ TP + P T TP +T P ASTA P +T +S
Sbjct: 291 KKTTTKPVSQPGETTASTPKAPGPTQPASTTIEATPQPETQPGASTAKAPGSTEPTVSQS 350
Query: 558 A 560
A
Sbjct: 351 A 351
>SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/87 (26%), Positives = 34/87 (39%)
Frame = +3
Query: 276 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG 455
TT + TP T+ +STP + +Y+ S SY + +SY + +Y +
Sbjct: 23 TTSYTSTPSYTCTTSYTSTPSYTSTTSYT----PTPSYTCTTSYTSTTSYTSTTSYTPTT 78
Query: 456 PLGATTYTTPFVQTVPIASTASLPVAT 536
TT TP P S P T
Sbjct: 79 SYTPTTSYTPTTSYTPTPSYTPTPSYT 105
>SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 4/91 (4%)
Frame = +3
Query: 276 TTYHGKTPLLASTSYVSSTPLIS-QPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIAS 452
T+Y T ++TSY S+T S + + S SY + +SY +Y +
Sbjct: 90 TSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTCTTSYTCT 149
Query: 453 GPLGAT---TYTTPFVQTVPIASTASLPVAT 536
T T TT + T ST S T
Sbjct: 150 TSYTCTTSYTSTTSYTSTTSYTSTTSYTSTT 180
>SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098)
Length = 620
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +3
Query: 294 TPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYI-ASGPLGAT 470
+PL +S+ SS+PL S S + SP S + SS +T ++ + +S PL
Sbjct: 171 SPLTSSSPLTSSSPLTSPSPLTSPSPLTSSSPLTSSSPLTSSSPLTSSSPLTSSSPL--- 227
Query: 471 TYTTPFVQTVPIASTASLPVATHL 542
T +P + P+ S++ L ++ L
Sbjct: 228 TSPSPLTSSSPLTSSSPLTSSSPL 251
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 294 TPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYI-ASGPLGAT 470
+PL +S+ SS+PL S S+ + SP S + SS +T ++ + +S PL
Sbjct: 195 SPLTSSSPLTSSSPLTSSSPLTSSSPLTSSSPLTSPSPLTSSSPLTSSSPLTSSSPL--- 251
Query: 471 TYTTPFVQTVPIASTASL 524
T ++P P+ S + L
Sbjct: 252 TSSSPLTSPSPLTSPSPL 269
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +3
Query: 396 PVSYIAPSSYITPNTYIASGPLGATTYTTPFVQTVPIASTASLPVATHLIKKRSAP 563
P + +AP + + P T +A A TT VPI TA+ P T + AP
Sbjct: 1348 PETTVAPVTTVIPETTVAPDTTVAPKSTTLASTVVPITETAAGPETTLASETTMAP 1403
Score = 27.9 bits (59), Expect = 8.8
Identities = 20/57 (35%), Positives = 25/57 (43%)
Frame = +3
Query: 396 PVSYIAPSSYITPNTYIASGPLGATTYTTPFVQTVPIASTASLPVATHLIKKRSAPV 566
P S +AP + I P T IA G A TT +T + T P T + APV
Sbjct: 2099 PESTVAPGTTIAPETTIAPGTTMAPE-TTVAPETTMVPVTTLEPETTMAPESTVAPV 2154
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Frame = +3
Query: 354 AYSAHFIKKRSPQWPVSYIAPSSYITPNTYIA--SGPLGATTY---TTPFVQTVPIASTA 518
A S + +P P + +AP + P T +A + ATT TT ++T A T
Sbjct: 194 AASETTVAPETPDAPATTLAPETTAAPETTVAPETTDAPATTLAPKTTTALETTVEAKTT 253
Query: 519 SLPVATHLIKKRSAP 563
+P T ++ SAP
Sbjct: 254 VVPETTPALETTSAP 268
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +3
Query: 396 PVSYIAPSSYITPNTYIASGPLGATTYTTPFVQTVPIASTASLPVATHLIKKRSAPV 566
P S +AP + P T +A G + TT +T T P T ++ +APV
Sbjct: 126 PESTVAPETTAVPETTLAPG-ITVAQETTAAPETTVAPETTVAPETTAALETTAAPV 181
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 29.1 bits (62), Expect = 3.8
Identities = 25/96 (26%), Positives = 35/96 (36%)
Frame = +3
Query: 276 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG 455
TT KT T+ V T + + P + AP + P T A+
Sbjct: 2835 TTSVPKTTAAPETTSVPKTTAAPETTTLPKTTAAPETTSVPKTTAAPGTTSVPKT-TAAP 2893
Query: 456 PLGATTYTTPFVQTVPIASTASLPVATHLIKKRSAP 563
A TT +T P+ T + P T L K +AP
Sbjct: 2894 ETTAVPKTTAAPETTPLPKTTAAPETTTLPKITAAP 2929
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 411 APSSYITPNTYIASGPLGATTYTTPFVQTVPIASTASLPV 530
APSS +T +GP TT P V T+ +TA+ P+
Sbjct: 804 APSSNPNESTTPTTGPTTGTTALPPGVTTITTPATATTPL 843
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Frame = +3
Query: 414 PSSYITPNTYIASG----PLGATTYTTPFVQTVPIASTASLPVAT 536
P+ TP T +G P G TT TTP T P+ + P T
Sbjct: 809 PNESTTPTTGPTTGTTALPPGVTTITTPATATTPLPPGVTTPAGT 853
>SB_42963| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +1
Query: 391 NGP*ATSLLAPTSLPTPTSQVALLEPLPTQHPSCRPCRS 507
N P + LL LPT Q+ L +P P PS P RS
Sbjct: 278 NTPFVSRLLLALVLPTMHLQLLLTKPTPATPPSRAPTRS 316
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +3
Query: 384 SPQWPVSYIAPSSYITPNTYIASGPLGATTYTTPFVQTVPIASTASLPVAT 536
+P P + P++ TP + P TT TTP T P +T + P T
Sbjct: 60 TPTKPTNTTPPAT-TTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTT 109
>SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 549
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 578 SCGQNGCRPLLDQMSCDGK*CSRC 507
SC N C+P LD+M+ +G+ RC
Sbjct: 32 SCAHNVCKPCLDRMTFNGEKEIRC 55
>SB_10933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 472
Score = 28.3 bits (60), Expect = 6.6
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = +3
Query: 276 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSP-QWPVSYIAPSSYITPNTYIAS 452
T YHG TP +T Y +TP A + +P + Y S + Y S
Sbjct: 327 TPYHGATPYRGATPYRGATPYRGATPYRGATPYRGATPYRGATPYRGASPHHGATPYRRS 386
Query: 453 GPL-GATTY--TTPFVQTVP 503
P G+T Y +TP+ ++P
Sbjct: 387 TPYHGSTPYRGSTPYRGSIP 406
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/87 (24%), Positives = 36/87 (41%)
Frame = +3
Query: 276 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG 455
TT +T + A T T + ++ A + + + P + +AP + + P T +A+
Sbjct: 169 TTAAAETTVAAETIAAPDTTVAAETTASAETTVAPETTLAPETTMAPETTMAPETTVAAE 228
Query: 456 PLGATTYTTPFVQTVPIASTASLPVAT 536
A TT +T A T P T
Sbjct: 229 STDAPD-TTVAAETTASAETTVAPETT 254
>SB_46249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 834
Score = 27.9 bits (59), Expect = 8.8
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Frame = +3
Query: 294 TPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVS--YIAPSSYITPNTYIASGPL-- 461
+PL S+S S+PL Y + + K S + S Y + S Y +P Y S PL
Sbjct: 593 SPLYKSSSLYKSSPLYKSSPPYKSSSLYKSSSLYKSSSLYKSSSLYESPPLY-KSSPLYK 651
Query: 462 GATTY-TTPFVQTVPIASTASLPVATHLIKKRS 557
+ Y ++ ++ P+ ++SL ++ L K S
Sbjct: 652 SSPPYKSSSLYRSSPLCKSSSLYKSSPLYKSSS 684
>SB_34458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1318
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +3
Query: 381 RSPQWPVSYIAPSSY--ITPNTYIASGPLGATTYTTPFVQTVPIASTASLPV 530
R P PVSY P+SY P + +S P+ + + +TP + PI ++S+ V
Sbjct: 40 RRPPVPVSYELPASYQRSVPVSTSSSTPVSSPSNSTP---STPIRKSSSVTV 88
>SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 858
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -3
Query: 575 CGQNGCRPLLDQMSCDGK*CSRC-DRHGLHEG 483
CG CRP + + S K C C D G+ +G
Sbjct: 694 CGHTFCRPCITEASKSSKLCPTCRDPFGVQQG 725
>SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 911
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -3
Query: 575 CGQNGCRPLLDQMSCDGK*CSRC-DRHGLHEG 483
CG CRP + + S K C C D G+ +G
Sbjct: 769 CGHTFCRPCITEASKSSKLCPTCRDPFGVQQG 800
>SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32)
Length = 1168
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 406 TSLLAPTSLPTPTSQVALLEPLPTQHPSCRPCRSHRLHHFPSQ 534
T+LL P ++ P Q LL+P+ P + S HH+ ++
Sbjct: 675 TTLLQPVTITPPKPQHTLLQPVTITPPKPQHNTSTTSHHYTTK 717
>SB_13237| Best HMM Match : zf-CCHC (HMM E-Value=0.0076)
Length = 558
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -3
Query: 590 RSGVSCGQNGCRPLLDQMSCDGK*CSRCDRHGLHEGCCVG 471
R V CG+ G D GK C++C + G CC G
Sbjct: 22 RRKVVCGKKG-HIKKDSCPARGKKCAKCFKSGHFAACCKG 60
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,700,185
Number of Sequences: 59808
Number of extensions: 430059
Number of successful extensions: 1398
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1352
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1913853903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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